RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 CT47B1P0C2W7 299 aaPredicted RBP26.63■■□□□ 1.85
E2F1-201ENST00000343380 STK26Q9P289 416 aa26.63■■□□□ 1.85
E2F1-201ENST00000343380 PUS7Q96PZ0 661 aaKnown RBP26.63■■□□□ 1.85
E2F1-201ENST00000343380 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
E2F1-201ENST00000343380 DDX19BQ9UMR2 479 aa26.62■■□□□ 1.85
E2F1-201ENST00000343380 RRAGDQ9NQL2 400 aaPredicted RBP26.62■■□□□ 1.85
E2F1-201ENST00000343380 SMC5Q8IY18 1101 aa26.61■■□□□ 1.85
E2F1-201ENST00000343380 ABCC11Q96J66 1382 aa26.6■■□□□ 1.85
E2F1-201ENST00000343380 COL3A1P02461 1466 aaPredicted RBP26.59■■□□□ 1.85
E2F1-201ENST00000343380 EIF5BO60841 1220 aaKnown RBP26.59■■□□□ 1.85
E2F1-201ENST00000343380 XRCC6P12956 609 aaKnown RBP eCLIP26.59■■□□□ 1.85
E2F1-201ENST00000343380 ZBTB40Q9NUA8 1239 aa26.59■■□□□ 1.85
E2F1-201ENST00000343380 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
E2F1-201ENST00000343380 L1TD1Q5T7N2 865 aaKnown RBP26.59■■□□□ 1.85
E2F1-201ENST00000343380 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
E2F1-201ENST00000343380 RIPK4P57078 832 aa26.58■■□□□ 1.85
E2F1-201ENST00000343380 ABCC3O15438 1527 aa26.58■■□□□ 1.84
E2F1-201ENST00000343380 FYB1O15117 783 aa26.58■■□□□ 1.84
E2F1-201ENST00000343380 CAMSAP1Q5T5Y3 1602 aa26.57■■□□□ 1.84
E2F1-201ENST00000343380 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
E2F1-201ENST00000343380 PANK2Q9BZ23 570 aa26.56■■□□□ 1.84
E2F1-201ENST00000343380 CHMP5Q9NZZ3 219 aa26.56■■□□□ 1.84
E2F1-201ENST00000343380 HECW2Q9P2P5 1572 aa26.55■■□□□ 1.84
E2F1-201ENST00000343380 NEXMIFQ5QGS0 1516 aa26.55■■□□□ 1.84
E2F1-201ENST00000343380 FSD2A1L4K1 749 aa26.55■■□□□ 1.84
E2F1-201ENST00000343380 ZNF692Q9BU19 519 aaPredicted RBP26.55■■□□□ 1.84
E2F1-201ENST00000343380 POGZQ7Z3K3 1410 aa26.54■■□□□ 1.84
E2F1-201ENST00000343380 LNPKQ9C0E8 428 aa26.54■■□□□ 1.84
E2F1-201ENST00000343380 NPM1P06748 294 aaKnown RBP eCLIP26.53■■□□□ 1.84
E2F1-201ENST00000343380 MINK1Q8N4C8 1332 aaPredicted RBP26.52■■□□□ 1.84
E2F1-201ENST00000343380 GOLGA6L3A6NEY3 463 aa26.52■■□□□ 1.84
E2F1-201ENST00000343380 IDI1Q13907 227 aa26.52■■□□□ 1.84
E2F1-201ENST00000343380 IL16Q14005 1332 aa26.52■■□□□ 1.84
E2F1-201ENST00000343380 TRAK2O60296 914 aa26.51■■□□□ 1.84
E2F1-201ENST00000343380 NUCB1Q02818 461 aa26.51■■□□□ 1.83
E2F1-201ENST00000343380 MLH3Q9UHC1 1453 aa26.5■■□□□ 1.83
E2F1-201ENST00000343380 FBLN1P23142 703 aa26.5■■□□□ 1.83
E2F1-201ENST00000343380 CYB5RLQ6IPT4 315 aa26.5■■□□□ 1.83
E2F1-201ENST00000343380 CD163L1Q9NR16 1453 aa26.49■■□□□ 1.83
E2F1-201ENST00000343380 HSCBQ8IWL3 235 aa26.48■■□□□ 1.83
E2F1-201ENST00000343380 DIAPH1O60610 1272 aaKnown RBP26.48■■□□□ 1.83
E2F1-201ENST00000343380 RAPGEF3O95398 923 aa26.47■■□□□ 1.83
E2F1-201ENST00000343380 KIF16BQ96L93 1317 aa26.47■■□□□ 1.83
E2F1-201ENST00000343380 PIK3C2BO00750 1634 aa26.47■■□□□ 1.83
E2F1-201ENST00000343380 PRAM1Q96QH2 718 aa26.46■■□□□ 1.83
E2F1-201ENST00000343380 RSPH6AQ9H0K4 717 aa26.46■■□□□ 1.83
E2F1-201ENST00000343380 DDIT3P35638 169 aa26.46■■□□□ 1.83
E2F1-201ENST00000343380 RBM25P49756 843 aaKnown RBP26.45■■□□□ 1.83
E2F1-201ENST00000343380 CHD1LQ86WJ1 897 aa26.45■■□□□ 1.83
E2F1-201ENST00000343380 IPO8O15397 1037 aaKnown RBP26.45■■□□□ 1.82
E2F1-201ENST00000343380 TERF2IPQ9NYB0 399 aa26.44■■□□□ 1.82
E2F1-201ENST00000343380 NCOA3Q9Y6Q9 1424 aa26.43■■□□□ 1.82
E2F1-201ENST00000343380 C1orf115Q9H7X2 142 aa26.43■■□□□ 1.82
E2F1-201ENST00000343380 THUMPD2Q9BTF0 503 aaKnown RBP26.43■■□□□ 1.82
E2F1-201ENST00000343380 PNPLA6Q8IY17 1366 aa26.43■■□□□ 1.82
E2F1-201ENST00000343380 PTPRMP28827 1452 aa26.42■■□□□ 1.82
E2F1-201ENST00000343380 PRKAR2BP31323 418 aa26.41■■□□□ 1.82
E2F1-201ENST00000343380 ALDH1L2Q3SY69 923 aa26.41■■□□□ 1.82
E2F1-201ENST00000343380 KIF2CQ99661 725 aa26.41■■□□□ 1.82
E2F1-201ENST00000343380 ATAD2Q6PL18 1390 aa26.4■■□□□ 1.82
E2F1-201ENST00000343380 CD2BP2O95400 341 aaKnown RBP26.39■■□□□ 1.82
E2F1-201ENST00000343380 PHACTR3Q96KR7 559 aa26.39■■□□□ 1.82
E2F1-201ENST00000343380 CABP1Q9NZU7 370 aa26.39■■□□□ 1.82
E2F1-201ENST00000343380 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.82
E2F1-201ENST00000343380 ZBTB7BO15156 539 aaPredicted RBP26.39■■□□□ 1.81
E2F1-201ENST00000343380 ANKRD45Q5TZF3 282 aa26.39■■□□□ 1.81
E2F1-201ENST00000343380 TSPYL6Q8N831 410 aa26.39■■□□□ 1.81
E2F1-201ENST00000343380 SNX21Q969T3 373 aa26.38■■□□□ 1.81
E2F1-201ENST00000343380 TNPO1Q92973 898 aaKnown RBP26.37■■□□□ 1.81
E2F1-201ENST00000343380 LRRC7Q96NW7 1537 aa26.37■■□□□ 1.81
E2F1-201ENST00000343380 MED14O60244 1454 aa26.37■■□□□ 1.81
E2F1-201ENST00000343380 FCHSD2O94868 740 aa26.37■■□□□ 1.81
E2F1-201ENST00000343380 BMP2KLQ5H9B9 411 aa26.37■■□□□ 1.81
E2F1-201ENST00000343380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.37■■□□□ 1.81
E2F1-201ENST00000343380 CDK19Q9BWU1 502 aa26.36■■□□□ 1.81
E2F1-201ENST00000343380 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
E2F1-201ENST00000343380 HMOX1P09601 288 aa26.36■■□□□ 1.81
E2F1-201ENST00000343380 SIRT2Q8IXJ6 389 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 FOXD4L1Q9NU39 408 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 ZFYVE9O95405 1425 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 DDX11L8A8MPP1 907 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 VAMP4O75379 141 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 ANKRD26Q9UPS8 1709 aa26.35■■□□□ 1.81
E2F1-201ENST00000343380 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
E2F1-201ENST00000343380 POLKQ9UBT6 870 aa26.34■■□□□ 1.81
E2F1-201ENST00000343380 HDGFL2Q7Z4V5 671 aaPredicted RBP26.34■■□□□ 1.81
E2F1-201ENST00000343380 MRPL50Q8N5N7 158 aaKnown RBP26.34■■□□□ 1.81
E2F1-201ENST00000343380 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
E2F1-201ENST00000343380 HSP90AB1P08238 724 aaKnown RBP26.33■■□□□ 1.81
E2F1-201ENST00000343380 MYO5BQ9ULV0 1848 aa26.33■■□□□ 1.81
E2F1-201ENST00000343380 MRE11P49959 708 aa26.33■■□□□ 1.81
E2F1-201ENST00000343380 PNNQ9H307 717 aaKnown RBP26.32■■□□□ 1.8
E2F1-201ENST00000343380 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
E2F1-201ENST00000343380 BRPF1P55201 1214 aaPredicted RBP26.32■■□□□ 1.8
E2F1-201ENST00000343380 TBC1D9Q6ZT07 1266 aa26.32■■□□□ 1.8
E2F1-201ENST00000343380 GRPEL1Q9HAV7 217 aa26.32■■□□□ 1.8
E2F1-201ENST00000343380 GAS2L3Q86XJ1 694 aa26.3■■□□□ 1.8
E2F1-201ENST00000343380 SLC52A1Q9NWF4 448 aa26.3■■□□□ 1.8
E2F1-201ENST00000343380 CFAP74Q9C0B2 1584 aa26.3■■□□□ 1.8
E2F1-201ENST00000343380 ARHGAP31Q2M1Z3 1444 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms