RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 RBSNQ9H1K0 784 aa18.97■□□□□ 0.63
SNX18-202ENST00000343017 NSD3Q9BZ95 1437 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.96■□□□□ 0.63
SNX18-202ENST00000343017 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 C1orf115Q9H7X2 142 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 PODXL2Q9NZ53 605 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 AK9Q5TCS8 1911 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 ATP10AO60312 1499 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 PKP1Q13835 747 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 PRDM10Q9NQV6 1147 aa18.96■□□□□ 0.63
SNX18-202ENST00000343017 IQGAP3Q86VI3 1631 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 ABCC1P33527 1531 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 UQCRHLA0A096LP55 91 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 UQCRHP07919 91 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 KLHL40Q2TBA0 621 aa18.95■□□□□ 0.62
SNX18-202ENST00000343017 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
SNX18-202ENST00000343017 TBC1D9Q6ZT07 1266 aa18.94■□□□□ 0.62
SNX18-202ENST00000343017 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
SNX18-202ENST00000343017 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
SNX18-202ENST00000343017 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
SNX18-202ENST00000343017 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
SNX18-202ENST00000343017 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
SNX18-202ENST00000343017 ZSCAN23Q3MJ62 389 aa18.93■□□□□ 0.62
SNX18-202ENST00000343017 CEP152O94986 1710 aa18.92■□□□□ 0.62
SNX18-202ENST00000343017 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
SNX18-202ENST00000343017 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
SNX18-202ENST00000343017 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
SNX18-202ENST00000343017 SHPRHQ149N8 1683 aa18.91■□□□□ 0.62
SNX18-202ENST00000343017 JARID2Q92833 1246 aaPredicted RBP18.91■□□□□ 0.62
SNX18-202ENST00000343017 KANK1Q14678 1352 aa18.91■□□□□ 0.62
SNX18-202ENST00000343017 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
SNX18-202ENST00000343017 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
SNX18-202ENST00000343017 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
SNX18-202ENST00000343017 A0A0U1RQG5 324 aaPredicted RBP18.89■□□□□ 0.61
SNX18-202ENST00000343017 PTMSP20962 102 aa18.89■□□□□ 0.61
SNX18-202ENST00000343017 BMP2KLQ5H9B9 411 aa18.89■□□□□ 0.61
SNX18-202ENST00000343017 PRPF40AO75400 957 aaKnown RBP18.88■□□□□ 0.61
SNX18-202ENST00000343017 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
SNX18-202ENST00000343017 MPNDQ8N594 471 aa18.88■□□□□ 0.61
SNX18-202ENST00000343017 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
SNX18-202ENST00000343017 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
SNX18-202ENST00000343017 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
SNX18-202ENST00000343017 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
SNX18-202ENST00000343017 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
SNX18-202ENST00000343017 ZNF445P59923 1031 aa18.87■□□□□ 0.61
SNX18-202ENST00000343017 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
SNX18-202ENST00000343017 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
SNX18-202ENST00000343017 TSC1Q92574 1164 aa18.86■□□□□ 0.61
SNX18-202ENST00000343017 ZNF500O60304 480 aaPredicted RBP18.85■□□□□ 0.61
SNX18-202ENST00000343017 TMPOP42166 694 aaKnown RBP18.85■□□□□ 0.61
SNX18-202ENST00000343017 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
SNX18-202ENST00000343017 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
SNX18-202ENST00000343017 GPT2Q8TD30 523 aa18.85■□□□□ 0.61
SNX18-202ENST00000343017 TERF1P54274 439 aa18.84■□□□□ 0.61
SNX18-202ENST00000343017 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
SNX18-202ENST00000343017 PDLIM2Q96JY6 352 aa18.84■□□□□ 0.61
SNX18-202ENST00000343017 PTPRTO14522 1441 aa18.84■□□□□ 0.61
SNX18-202ENST00000343017 CLEC17AQ6ZS10 378 aa18.83■□□□□ 0.61
SNX18-202ENST00000343017 ZKSCAN5Q9Y2L8 839 aa18.83■□□□□ 0.61
SNX18-202ENST00000343017 ZNF518AQ6AHZ1 1483 aa18.83■□□□□ 0.61
SNX18-202ENST00000343017 ATP7AQ04656 1500 aa18.83■□□□□ 0.6
SNX18-202ENST00000343017 ZFYVE16Q7Z3T8 1539 aa18.83■□□□□ 0.6
SNX18-202ENST00000343017 KIF16BQ96L93 1317 aa18.83■□□□□ 0.6
SNX18-202ENST00000343017 SYCE3A1L190 88 aa18.83■□□□□ 0.6
SNX18-202ENST00000343017 IBTKQ9P2D0 1353 aaPredicted RBP18.82■□□□□ 0.6
SNX18-202ENST00000343017 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
SNX18-202ENST00000343017 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
SNX18-202ENST00000343017 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
SNX18-202ENST00000343017 SIRT2Q8IXJ6 389 aa18.81■□□□□ 0.6
SNX18-202ENST00000343017 TMEM63CQ9P1W3 806 aa18.81■□□□□ 0.6
SNX18-202ENST00000343017 ELL2O00472 640 aaPredicted RBP18.8■□□□□ 0.6
SNX18-202ENST00000343017 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
SNX18-202ENST00000343017 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
SNX18-202ENST00000343017 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
SNX18-202ENST00000343017 HS1BP3Q53T59 392 aa18.8■□□□□ 0.6
SNX18-202ENST00000343017 MLECQ14165 292 aa18.79■□□□□ 0.6
SNX18-202ENST00000343017 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
SNX18-202ENST00000343017 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
SNX18-202ENST00000343017 GSPT1P15170 499 aaKnown RBP18.79■□□□□ 0.6
SNX18-202ENST00000343017 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
SNX18-202ENST00000343017 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
SNX18-202ENST00000343017 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
SNX18-202ENST00000343017 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
SNX18-202ENST00000343017 STAC3Q96MF2 364 aa18.78■□□□□ 0.6
SNX18-202ENST00000343017 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
SNX18-202ENST00000343017 NOS1P29475 1434 aa18.78■□□□□ 0.6
SNX18-202ENST00000343017 DYNC1I1O14576 645 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 CDC45O75419 566 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 CYP2E1P05181 493 aaPredicted RBP18.77■□□□□ 0.6
SNX18-202ENST00000343017 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNX18-202ENST00000343017 ABCA9Q8IUA7 1624 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 NUCB2P80303 420 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.6
SNX18-202ENST00000343017 ATAD2Q6PL18 1390 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms