RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
FRMD4A-202ENST00000342409 NME9Q86XW9 330 aa22.96■■□□□ 1.27
FRMD4A-202ENST00000342409 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
FRMD4A-202ENST00000342409 WDR43Q15061 677 aaKnown RBP eCLIP22.95■■□□□ 1.26
FRMD4A-202ENST00000342409 MARF1Q9Y4F3 1742 aaKnown RBP22.93■■□□□ 1.26
FRMD4A-202ENST00000342409 TTC21BQ7Z4L5 1316 aa22.93■■□□□ 1.26
FRMD4A-202ENST00000342409 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
FRMD4A-202ENST00000342409 PMFBP1Q8TBY8 1022 aa22.92■■□□□ 1.26
FRMD4A-202ENST00000342409 PIK3C2AO00443 1686 aa22.92■■□□□ 1.26
FRMD4A-202ENST00000342409 OVOS2A0A0J9YW53 1432 aa22.9■■□□□ 1.26
FRMD4A-202ENST00000342409 OVOS2Q6IE36 1432 aa22.9■■□□□ 1.26
FRMD4A-202ENST00000342409 FBLN1P23142 703 aa22.89■■□□□ 1.26
FRMD4A-202ENST00000342409 USP54Q70EL1 1684 aa22.89■■□□□ 1.25
FRMD4A-202ENST00000342409 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
FRMD4A-202ENST00000342409 SMG6Q86US8 1419 aaKnown RBP22.88■■□□□ 1.25
FRMD4A-202ENST00000342409 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
FRMD4A-202ENST00000342409 POLKQ9UBT6 870 aa22.86■■□□□ 1.25
FRMD4A-202ENST00000342409 SALL2Q9Y467 1007 aaPredicted RBP22.86■■□□□ 1.25
FRMD4A-202ENST00000342409 AATKQ6ZMQ8 1374 aa22.86■■□□□ 1.25
FRMD4A-202ENST00000342409 PROSER2Q86WR7 435 aaPredicted RBP22.85■■□□□ 1.25
FRMD4A-202ENST00000342409 CCDC146Q8IYE0 955 aa22.85■■□□□ 1.25
FRMD4A-202ENST00000342409 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
FRMD4A-202ENST00000342409 COG3Q96JB2 828 aa22.83■■□□□ 1.25
FRMD4A-202ENST00000342409 PEAK1Q9H792 1746 aa22.83■■□□□ 1.24
FRMD4A-202ENST00000342409 NUDCQ9Y266 331 aa22.82■■□□□ 1.24
FRMD4A-202ENST00000342409 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
FRMD4A-202ENST00000342409 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
FRMD4A-202ENST00000342409 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
FRMD4A-202ENST00000342409 CDK12Q9NYV4 1490 aaPredicted RBP22.81■■□□□ 1.24
FRMD4A-202ENST00000342409 USP31Q70CQ4 1352 aa22.8■■□□□ 1.24
FRMD4A-202ENST00000342409 ZNF521Q96K83 1311 aa22.8■■□□□ 1.24
FRMD4A-202ENST00000342409 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
FRMD4A-202ENST00000342409 TMEM94Q12767 1356 aa22.8■■□□□ 1.24
FRMD4A-202ENST00000342409 APAF1O14727 1248 aa22.79■■□□□ 1.24
FRMD4A-202ENST00000342409 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
FRMD4A-202ENST00000342409 KIF1AQ12756 1690 aa22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 CDCA7LQ96GN5 454 aa22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 NCOA3Q9Y6Q9 1424 aa22.77■■□□□ 1.24
FRMD4A-202ENST00000342409 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
FRMD4A-202ENST00000342409 C1orf167Q5SNV9 1468 aa22.76■■□□□ 1.23
FRMD4A-202ENST00000342409 RRS1Q15050 365 aaKnown RBP22.76■■□□□ 1.23
FRMD4A-202ENST00000342409 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
FRMD4A-202ENST00000342409 DIAPH1O60610 1272 aaKnown RBP22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 RUNDC1Q96C34 613 aa22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 DCCP43146 1447 aa22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 MST1RQ04912 1400 aa22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
FRMD4A-202ENST00000342409 PPM1GO15355 546 aaPredicted RBP22.72■■□□□ 1.23
FRMD4A-202ENST00000342409 PLEKHF1Q96S99 279 aa22.71■■□□□ 1.23
FRMD4A-202ENST00000342409 RGPD1P0DJD0 1748 aa22.7■■□□□ 1.23
FRMD4A-202ENST00000342409 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
FRMD4A-202ENST00000342409 IL13P35225 146 aa22.7■■□□□ 1.22
FRMD4A-202ENST00000342409 LTN1O94822 1766 aa22.7■■□□□ 1.22
FRMD4A-202ENST00000342409 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
FRMD4A-202ENST00000342409 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
FRMD4A-202ENST00000342409 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
FRMD4A-202ENST00000342409 FKBP8Q14318 412 aa22.67■■□□□ 1.22
FRMD4A-202ENST00000342409 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
FRMD4A-202ENST00000342409 ALS2Q96Q42 1657 aa22.67■■□□□ 1.22
FRMD4A-202ENST00000342409 NGEFQ8N5V2 710 aa22.66■■□□□ 1.22
FRMD4A-202ENST00000342409 DLG5Q8TDM6 1919 aa22.66■■□□□ 1.22
FRMD4A-202ENST00000342409 NLRP6P59044 892 aa22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 NUTM2GQ5VZR2 741 aa22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 NFAT5O94916 1531 aa22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 MAP3K19Q56UN5 1328 aa22.65■■□□□ 1.22
FRMD4A-202ENST00000342409 FOXO3O43524 673 aa22.64■■□□□ 1.21
FRMD4A-202ENST00000342409 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
FRMD4A-202ENST00000342409 PSME1Q06323 249 aa22.64■■□□□ 1.21
FRMD4A-202ENST00000342409 TRMT2AQ8IZ69 625 aaKnown RBP22.64■■□□□ 1.21
FRMD4A-202ENST00000342409 ABTB2Q8N961 1025 aa22.64■■□□□ 1.21
FRMD4A-202ENST00000342409 SOX12O15370 315 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 ATF3P18847 181 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 SLFN5Q08AF3 891 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 WWC1Q8IX03 1113 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
FRMD4A-202ENST00000342409 DUSP27Q5VZP5 1158 aa22.62■■□□□ 1.21
FRMD4A-202ENST00000342409 MSH6P52701 1360 aa22.62■■□□□ 1.21
FRMD4A-202ENST00000342409 SBNO1A3KN83 1393 aa22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 FCHSD2O94868 740 aa22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 PHRF1Q9P1Y6 1649 aaKnown RBP22.61■■□□□ 1.21
FRMD4A-202ENST00000342409 NEFLP07196 543 aa22.6■■□□□ 1.21
FRMD4A-202ENST00000342409 HSP90AB2PQ58FF8 381 aa22.6■■□□□ 1.21
FRMD4A-202ENST00000342409 SLIT3O75094 1523 aa22.6■■□□□ 1.21
FRMD4A-202ENST00000342409 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
FRMD4A-202ENST00000342409 CCDC27Q2M243 656 aa22.6■■□□□ 1.21
FRMD4A-202ENST00000342409 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
FRMD4A-202ENST00000342409 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms