RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 RASSF8Q8NHQ8 419 aa18.43■□□□□ 0.54
PCDHB13-201ENST00000341948 RAD21O60216 631 aa18.43■□□□□ 0.54
PCDHB13-201ENST00000341948 REC8O95072 547 aa18.42■□□□□ 0.54
PCDHB13-201ENST00000341948 CCDC34Q96HJ3 373 aa18.42■□□□□ 0.54
PCDHB13-201ENST00000341948 C14orf93Q9H972 538 aaKnown RBP18.42■□□□□ 0.54
PCDHB13-201ENST00000341948 FCHSD2O94868 740 aa18.42■□□□□ 0.54
PCDHB13-201ENST00000341948 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
PCDHB13-201ENST00000341948 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
PCDHB13-201ENST00000341948 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
PCDHB13-201ENST00000341948 MARCH6O60337 910 aa18.41■□□□□ 0.54
PCDHB13-201ENST00000341948 ERC2O15083 957 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 A2MP01023 1474 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 AKAP17AQ02040 695 aaKnown RBP18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 VPS53Q5VIR6 699 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
PCDHB13-201ENST00000341948 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.53
PCDHB13-201ENST00000341948 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
PCDHB13-201ENST00000341948 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.53
PCDHB13-201ENST00000341948 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.53
PCDHB13-201ENST00000341948 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 MYL6BP14649 208 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
PCDHB13-201ENST00000341948 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 TRDNQ13061 729 aa18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 FOXD4L5Q5VV16 416 aaPredicted RBP18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 FOXD4L4Q8WXT5 416 aaPredicted RBP18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
PCDHB13-201ENST00000341948 SF3A1Q15459 793 aaKnown RBP18.36■□□□□ 0.53
PCDHB13-201ENST00000341948 TPM4P67936 248 aa18.36■□□□□ 0.53
PCDHB13-201ENST00000341948 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
PCDHB13-201ENST00000341948 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
PCDHB13-201ENST00000341948 WASHC4Q2M389 1173 aa18.36■□□□□ 0.53
PCDHB13-201ENST00000341948 H3BQV1 296 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 PHF14O94880 888 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 CCDC27Q2M243 656 aa18.35■□□□□ 0.53
PCDHB13-201ENST00000341948 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 SYCP2Q9BX26 1530 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 NOB1Q9ULX3 412 aaKnown RBP18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 EMILIN1Q9Y6C2 1016 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 ATP6V1DQ9Y5K8 247 aa18.34■□□□□ 0.53
PCDHB13-201ENST00000341948 WDR62O43379 1518 aa18.33■□□□□ 0.53
PCDHB13-201ENST00000341948 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
PCDHB13-201ENST00000341948 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.52
PCDHB13-201ENST00000341948 CTDP1Q9Y5B0 961 aaPredicted RBP18.33■□□□□ 0.52
PCDHB13-201ENST00000341948 DHX16O60231 1041 aaKnown RBP18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 TMPOP42166 694 aaKnown RBP18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 GNAI2P04899 355 aa18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
PCDHB13-201ENST00000341948 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 FYB1O15117 783 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 BCAR3O75815 825 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 HSPA2P54652 639 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 C1orf115Q9H7X2 142 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 NUP160Q12769 1436 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 CPLX1O14810 134 aa18.31■□□□□ 0.52
PCDHB13-201ENST00000341948 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 THUMPD2Q9BTF0 503 aaKnown RBP18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 ACEP12821 1306 aa18.3■□□□□ 0.52
PCDHB13-201ENST00000341948 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 MCM10Q7L590 875 aa18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 MSH6P52701 1360 aa18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
PCDHB13-201ENST00000341948 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 STARD3NLO95772 234 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
PCDHB13-201ENST00000341948 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms