RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
TMEM248-201ENST00000341567 FOXO3O43524 673 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 TNNQ9UQP3 1299 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 KDM5BQ9UGL1 1544 aa16.6■□□□□ 0.25
TMEM248-201ENST00000341567 TULP1O00294 542 aaPredicted RBP16.59■□□□□ 0.25
TMEM248-201ENST00000341567 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
TMEM248-201ENST00000341567 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
TMEM248-201ENST00000341567 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
TMEM248-201ENST00000341567 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
TMEM248-201ENST00000341567 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
TMEM248-201ENST00000341567 WDR63Q8IWG1 891 aa16.59■□□□□ 0.25
TMEM248-201ENST00000341567 SCAF11Q99590 1463 aaKnown RBP16.58■□□□□ 0.24
TMEM248-201ENST00000341567 LRRIQ1Q96JM4 1722 aa16.58■□□□□ 0.24
TMEM248-201ENST00000341567 PTMSP20962 102 aa16.58■□□□□ 0.24
TMEM248-201ENST00000341567 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
TMEM248-201ENST00000341567 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
TMEM248-201ENST00000341567 MVPQ14764 893 aaKnown RBP16.57■□□□□ 0.24
TMEM248-201ENST00000341567 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
TMEM248-201ENST00000341567 STRN4Q9NRL3 753 aa16.57■□□□□ 0.24
TMEM248-201ENST00000341567 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
TMEM248-201ENST00000341567 FYB1O15117 783 aa16.56■□□□□ 0.24
TMEM248-201ENST00000341567 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
TMEM248-201ENST00000341567 ST18O60284 1047 aa16.56■□□□□ 0.24
TMEM248-201ENST00000341567 FCHSD2O94868 740 aa16.56■□□□□ 0.24
TMEM248-201ENST00000341567 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
TMEM248-201ENST00000341567 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
TMEM248-201ENST00000341567 MRE11P49959 708 aa16.55■□□□□ 0.24
TMEM248-201ENST00000341567 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
TMEM248-201ENST00000341567 CFAP65Q6ZU64 1925 aaKnown RBP16.54■□□□□ 0.24
TMEM248-201ENST00000341567 F6X3S4 739 aa16.54■□□□□ 0.24
TMEM248-201ENST00000341567 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
TMEM248-201ENST00000341567 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
TMEM248-201ENST00000341567 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
TMEM248-201ENST00000341567 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
TMEM248-201ENST00000341567 ANKLE2Q86XL3 938 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
TMEM248-201ENST00000341567 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 IGHDP01880 384 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
TMEM248-201ENST00000341567 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.24
TMEM248-201ENST00000341567 GTF2E1P29083 439 aaPredicted RBP16.52■□□□□ 0.24
TMEM248-201ENST00000341567 KDM6BO15054 1643 aa16.52■□□□□ 0.24
TMEM248-201ENST00000341567 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
TMEM248-201ENST00000341567 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
TMEM248-201ENST00000341567 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
TMEM248-201ENST00000341567 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.23
TMEM248-201ENST00000341567 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.23
TMEM248-201ENST00000341567 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.23
TMEM248-201ENST00000341567 MPNDQ8N594 471 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
TMEM248-201ENST00000341567 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
TMEM248-201ENST00000341567 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
TMEM248-201ENST00000341567 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
TMEM248-201ENST00000341567 MYL6BP14649 208 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 MCM4P33991 863 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 AEBP1Q8IUX7 1158 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
TMEM248-201ENST00000341567 R3HCC1Q9Y3T6 440 aaKnown RBP16.5■□□□□ 0.23
TMEM248-201ENST00000341567 TRIM27P14373 513 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 NASPP49321 788 aaPredicted RBP16.5■□□□□ 0.23
TMEM248-201ENST00000341567 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 UHRF1BP1LA0JNW5 1464 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 A2MP01023 1474 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 EXOC6BQ9Y2D4 811 aa16.5■□□□□ 0.23
TMEM248-201ENST00000341567 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
TMEM248-201ENST00000341567 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
TMEM248-201ENST00000341567 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
TMEM248-201ENST00000341567 SIL1Q9H173 461 aa16.49■□□□□ 0.23
TMEM248-201ENST00000341567 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
TMEM248-201ENST00000341567 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
TMEM248-201ENST00000341567 CCDC30Q5VVM6 783 aa16.48■□□□□ 0.23
TMEM248-201ENST00000341567 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
TMEM248-201ENST00000341567 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 ACEP12821 1306 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 ANXA1P04083 346 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 CDK11BP21127 795 aaKnown RBP16.47■□□□□ 0.23
TMEM248-201ENST00000341567 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
TMEM248-201ENST00000341567 PARD3Q8TEW0 1356 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
TMEM248-201ENST00000341567 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-201ENST00000341567 REC8O95072 547 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 FOSBP53539 338 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 RLBP1P12271 317 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
TMEM248-201ENST00000341567 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms