RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 USP32Q8NFA0 1604 aa14.67□□□□□ -0.06
TPM3-207ENST00000341372 KIF1AQ12756 1690 aa14.67□□□□□ -0.06
TPM3-207ENST00000341372 POGKQ9P215 609 aa14.66□□□□□ -0.06
TPM3-207ENST00000341372 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
TPM3-207ENST00000341372 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
TPM3-207ENST00000341372 ANKARQ7Z5J8 1434 aa14.65□□□□□ -0.06
TPM3-207ENST00000341372 GSE1Q14687 1217 aa14.65□□□□□ -0.06
TPM3-207ENST00000341372 NBPF8Q3BBV2 869 aa14.65□□□□□ -0.06
TPM3-207ENST00000341372 TULP4Q9NRJ4 1543 aa14.64□□□□□ -0.07
TPM3-207ENST00000341372 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
TPM3-207ENST00000341372 CCDC9Q9Y3X0 531 aaKnown RBP14.64□□□□□ -0.07
TPM3-207ENST00000341372 ROCK2O75116 1388 aaKnown RBP14.64□□□□□ -0.07
TPM3-207ENST00000341372 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
TPM3-207ENST00000341372 ORAI2Q96SN7 254 aa14.63□□□□□ -0.07
TPM3-207ENST00000341372 QRICH2Q9H0J4 1663 aa14.63□□□□□ -0.07
TPM3-207ENST00000341372 EIF3AQ14152 1382 aaKnown RBP14.63□□□□□ -0.07
TPM3-207ENST00000341372 JCADQ9P266 1359 aa14.63□□□□□ -0.07
TPM3-207ENST00000341372 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM3-207ENST00000341372 RYDENQ9NUL5 291 aaKnown RBP14.63□□□□□ -0.07
TPM3-207ENST00000341372 BCL11BQ9C0K0 894 aaPredicted RBP14.61□□□□□ -0.07
TPM3-207ENST00000341372 PXDNQ92626 1479 aa14.61□□□□□ -0.07
TPM3-207ENST00000341372 SOS2Q07890 1332 aaPredicted RBP14.61□□□□□ -0.07
TPM3-207ENST00000341372 MINK1Q8N4C8 1332 aaPredicted RBP14.61□□□□□ -0.07
TPM3-207ENST00000341372 ZMYND10O75800 440 aa14.61□□□□□ -0.07
TPM3-207ENST00000341372 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
TPM3-207ENST00000341372 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
TPM3-207ENST00000341372 STK24Q9Y6E0 443 aa14.61□□□□□ -0.07
TPM3-207ENST00000341372 ITSN1Q15811 1721 aa14.6□□□□□ -0.07
TPM3-207ENST00000341372 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
TPM3-207ENST00000341372 ATP7BP35670 1465 aa14.6□□□□□ -0.07
TPM3-207ENST00000341372 CENPJQ9HC77 1338 aaPredicted RBP14.6□□□□□ -0.07
TPM3-207ENST00000341372 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
TPM3-207ENST00000341372 NECTIN2Q92692 538 aa14.59□□□□□ -0.07
TPM3-207ENST00000341372 GPBP1L1Q9HC44 474 aaPredicted RBP14.59□□□□□ -0.07
TPM3-207ENST00000341372 ESCO1Q5FWF5 840 aa14.59□□□□□ -0.07
TPM3-207ENST00000341372 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.07
TPM3-207ENST00000341372 HIRIP3Q9BW71 556 aaPredicted RBP14.58□□□□□ -0.08
TPM3-207ENST00000341372 PRR36Q9H6K5 1346 aa14.58□□□□□ -0.08
TPM3-207ENST00000341372 DDX17Q92841 729 aaKnown RBP14.58□□□□□ -0.08
TPM3-207ENST00000341372 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
TPM3-207ENST00000341372 NUTM2FA1L443 756 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 SEMA3EO15041 775 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 PNPLA6Q8IY17 1366 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 SBNO2Q9Y2G9 1366 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 SPATA31A6Q5VVP1 1343 aa14.57□□□□□ -0.08
TPM3-207ENST00000341372 IL27Q8NEV9 243 aa14.56□□□□□ -0.08
TPM3-207ENST00000341372 LRRC59Q96AG4 307 aaKnown RBP14.56□□□□□ -0.08
TPM3-207ENST00000341372 LRP6O75581 1613 aa14.55□□□□□ -0.08
TPM3-207ENST00000341372 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
TPM3-207ENST00000341372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 TRPM3Q9HCF6 1732 aaPredicted RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 PDIA4P13667 645 aaKnown RBP14.54□□□□□ -0.08
TPM3-207ENST00000341372 NUBP1P53384 320 aa14.54□□□□□ -0.08
TPM3-207ENST00000341372 CARD11Q9BXL7 1154 aa14.54□□□□□ -0.08
TPM3-207ENST00000341372 FOXO3O43524 673 aa14.53□□□□□ -0.08
TPM3-207ENST00000341372 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
TPM3-207ENST00000341372 CDK19Q9BWU1 502 aa14.53□□□□□ -0.08
TPM3-207ENST00000341372 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
TPM3-207ENST00000341372 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
TPM3-207ENST00000341372 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
TPM3-207ENST00000341372 ALS2Q96Q42 1657 aa14.5□□□□□ -0.09
TPM3-207ENST00000341372 POLR3AO14802 1390 aaPredicted RBP14.5□□□□□ -0.09
TPM3-207ENST00000341372 TNS3Q68CZ2 1445 aa14.5□□□□□ -0.09
TPM3-207ENST00000341372 APBB1O00213 710 aa14.5□□□□□ -0.09
TPM3-207ENST00000341372 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
TPM3-207ENST00000341372 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
TPM3-207ENST00000341372 EVC2Q86UK5 1308 aa14.49□□□□□ -0.09
TPM3-207ENST00000341372 XPCQ01831 940 aaPredicted RBP14.48□□□□□ -0.09
TPM3-207ENST00000341372 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 PMFBP1Q8TBY8 1022 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 ABCA3Q99758 1704 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 PLEKHG3A1L390 1219 aa14.48□□□□□ -0.09
TPM3-207ENST00000341372 PSME1Q06323 249 aa14.47□□□□□ -0.09
TPM3-207ENST00000341372 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
TPM3-207ENST00000341372 PPIP5K1Q6PFW1 1433 aa14.47□□□□□ -0.09
TPM3-207ENST00000341372 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.09
TPM3-207ENST00000341372 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.1
TPM3-207ENST00000341372 SPDYE6P0CI01 402 aa14.46□□□□□ -0.1
TPM3-207ENST00000341372 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.1
TPM3-207ENST00000341372 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.1
TPM3-207ENST00000341372 CABP2Q9NPB3 220 aa14.46□□□□□ -0.1
TPM3-207ENST00000341372 ARHGEF10O15013 1369 aa14.46□□□□□ -0.1
TPM3-207ENST00000341372 CRYBG1Q9Y4K1 1723 aa14.45□□□□□ -0.1
TPM3-207ENST00000341372 CAPN15O75808 1086 aa14.45□□□□□ -0.1
TPM3-207ENST00000341372 USP47Q96K76 1375 aa14.45□□□□□ -0.1
TPM3-207ENST00000341372 ATAD2Q6PL18 1390 aa14.44□□□□□ -0.1
TPM3-207ENST00000341372 TESK2Q96S53 571 aa14.44□□□□□ -0.1
TPM3-207ENST00000341372 RGS17Q9UGC6 210 aaPredicted RBP14.44□□□□□ -0.1
TPM3-207ENST00000341372 AKAP12Q02952 1782 aa14.44□□□□□ -0.1
TPM3-207ENST00000341372 BARGINQ6ZT62 677 aa14.44□□□□□ -0.1
TPM3-207ENST00000341372 NGDNQ8NEJ9 315 aaKnown RBP14.44□□□□□ -0.1
TPM3-207ENST00000341372 ACEP12821 1306 aa14.43□□□□□ -0.1
TPM3-207ENST00000341372 ABCB7O75027 752 aa14.43□□□□□ -0.1
TPM3-207ENST00000341372 BRD4O60885 1362 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms