RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TMEM131LA2VDJ0 1609 aa15.07■□□□□ 0
RTN3-203ENST00000341307 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
RTN3-203ENST00000341307 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
RTN3-203ENST00000341307 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
RTN3-203ENST00000341307 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ 0
RTN3-203ENST00000341307 KLHL34Q8N239 644 aa15.05■□□□□ 0
RTN3-203ENST00000341307 QRICH2Q9H0J4 1663 aa15.05■□□□□ 0
RTN3-203ENST00000341307 NLRP1Q9C000 1473 aa15.05■□□□□ -0
RTN3-203ENST00000341307 USP19O94966 1318 aa15.05■□□□□ -0
RTN3-203ENST00000341307 GRPEL1Q9HAV7 217 aa15.05■□□□□ -0
RTN3-203ENST00000341307 PPP2R1AP30153 589 aa15.04■□□□□ -0
RTN3-203ENST00000341307 CRBNQ96SW2 442 aa15.04■□□□□ -0
RTN3-203ENST00000341307 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
RTN3-203ENST00000341307 TERF1P54274 439 aa15.04■□□□□ -0
RTN3-203ENST00000341307 TXNDC2Q86VQ3 553 aa15.04■□□□□ -0
RTN3-203ENST00000341307 OFD1O75665 1012 aa15.03■□□□□ -0
RTN3-203ENST00000341307 SLC12A5Q9H2X9 1139 aa15.03■□□□□ -0
RTN3-203ENST00000341307 PPP4R3BQ5MIZ7 849 aa15.03■□□□□ -0
RTN3-203ENST00000341307 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
RTN3-203ENST00000341307 PLIN1O60240 522 aa15.02■□□□□ -0
RTN3-203ENST00000341307 ZSCAN20P17040 1043 aaPredicted RBP15.02□□□□□ -0.01
RTN3-203ENST00000341307 ZNF830Q96NB3 372 aaPredicted RBP15.02□□□□□ -0.01
RTN3-203ENST00000341307 UBR1Q8IWV7 1749 aa15.01□□□□□ -0.01
RTN3-203ENST00000341307 TRIM44Q96DX7 344 aaPredicted RBP15.01□□□□□ -0.01
RTN3-203ENST00000341307 NCLP19338 710 aaKnown RBP15.01□□□□□ -0.01
RTN3-203ENST00000341307 TMEM2Q9UHN6 1383 aa15.01□□□□□ -0.01
RTN3-203ENST00000341307 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
RTN3-203ENST00000341307 ANKLE2Q86XL3 938 aa15□□□□□ -0.01
RTN3-203ENST00000341307 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
RTN3-203ENST00000341307 ARID3AQ99856 593 aa15□□□□□ -0.01
RTN3-203ENST00000341307 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
RTN3-203ENST00000341307 MCM4P33991 863 aa14.99□□□□□ -0.01
RTN3-203ENST00000341307 ADAMTS8Q9UP79 889 aa14.99□□□□□ -0.01
RTN3-203ENST00000341307 ZFYVE9O95405 1425 aa14.99□□□□□ -0.01
RTN3-203ENST00000341307 ZNF142P52746 1687 aaPredicted RBP14.99□□□□□ -0.01
RTN3-203ENST00000341307 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
RTN3-203ENST00000341307 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
RTN3-203ENST00000341307 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
RTN3-203ENST00000341307 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
RTN3-203ENST00000341307 VGLL3A8MV65 326 aa14.97□□□□□ -0.01
RTN3-203ENST00000341307 TNNT2P45379 298 aaPredicted RBP14.97□□□□□ -0.01
RTN3-203ENST00000341307 NSD3Q9BZ95 1437 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 RIMS2Q9UQ26 1411 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 TRAK2O60296 914 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 BECN1Q14457 450 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.96□□□□□ -0.01
RTN3-203ENST00000341307 CDCA7LQ96GN5 454 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 PRAM1Q96QH2 718 aa14.96□□□□□ -0.01
RTN3-203ENST00000341307 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.02
RTN3-203ENST00000341307 EID1Q9Y6B2 187 aa14.96□□□□□ -0.02
RTN3-203ENST00000341307 MINK1Q8N4C8 1332 aaPredicted RBP14.96□□□□□ -0.02
RTN3-203ENST00000341307 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
RTN3-203ENST00000341307 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
RTN3-203ENST00000341307 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
RTN3-203ENST00000341307 NPC1L1Q9UHC9 1359 aa14.94□□□□□ -0.02
RTN3-203ENST00000341307 BLMP54132 1417 aaPredicted RBP14.94□□□□□ -0.02
RTN3-203ENST00000341307 ALKQ9UM73 1620 aa14.94□□□□□ -0.02
RTN3-203ENST00000341307 YTHDC2Q9H6S0 1430 aaKnown RBP14.94□□□□□ -0.02
RTN3-203ENST00000341307 ISY1Q9ULR0 285 aaKnown RBP14.94□□□□□ -0.02
RTN3-203ENST00000341307 ARHGAP23Q9P227 1491 aa14.93□□□□□ -0.02
RTN3-203ENST00000341307 ZNF335Q9H4Z2 1342 aaPredicted RBP14.93□□□□□ -0.02
RTN3-203ENST00000341307 SRPK2P78362 688 aaKnown RBP14.93□□□□□ -0.02
RTN3-203ENST00000341307 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
RTN3-203ENST00000341307 R3HCC1Q9Y3T6 440 aaKnown RBP14.93□□□□□ -0.02
RTN3-203ENST00000341307 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
RTN3-203ENST00000341307 ANP32BQ92688 251 aaKnown RBP14.93□□□□□ -0.02
RTN3-203ENST00000341307 ZSCAN30Q86W11 494 aa14.92□□□□□ -0.02
RTN3-203ENST00000341307 SLIT1O75093 1534 aa14.92□□□□□ -0.02
RTN3-203ENST00000341307 UQCRHLA0A096LP55 91 aa14.92□□□□□ -0.02
RTN3-203ENST00000341307 UQCRHP07919 91 aa14.92□□□□□ -0.02
RTN3-203ENST00000341307 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
RTN3-203ENST00000341307 KIF20AO95235 890 aa14.91□□□□□ -0.02
RTN3-203ENST00000341307 SEC24BO95487 1268 aa14.91□□□□□ -0.02
RTN3-203ENST00000341307 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
RTN3-203ENST00000341307 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
RTN3-203ENST00000341307 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
RTN3-203ENST00000341307 NPHP4O75161 1426 aaPredicted RBP14.9□□□□□ -0.02
RTN3-203ENST00000341307 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
RTN3-203ENST00000341307 FTSJ3Q8IY81 847 aaKnown RBP14.9□□□□□ -0.02
RTN3-203ENST00000341307 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
RTN3-203ENST00000341307 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
RTN3-203ENST00000341307 GTPBP4Q9BZE4 634 aaKnown RBP14.88□□□□□ -0.03
RTN3-203ENST00000341307 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
RTN3-203ENST00000341307 PPP1R9BQ96SB3 815 aa14.87□□□□□ -0.03
RTN3-203ENST00000341307 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
RTN3-203ENST00000341307 A0A1W2PP64 1363 aa14.86□□□□□ -0.03
RTN3-203ENST00000341307 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
RTN3-203ENST00000341307 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
RTN3-203ENST00000341307 METP08581 1390 aa14.86□□□□□ -0.03
RTN3-203ENST00000341307 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
RTN3-203ENST00000341307 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.86□□□□□ -0.03
RTN3-203ENST00000341307 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
RTN3-203ENST00000341307 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
RTN3-203ENST00000341307 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
RTN3-203ENST00000341307 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
RTN3-203ENST00000341307 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
RTN3-203ENST00000341307 MSNP26038 577 aaKnown RBP14.85□□□□□ -0.03
RTN3-203ENST00000341307 CCDC173Q0VFZ6 552 aa14.85□□□□□ -0.03
RTN3-203ENST00000341307 MED14O60244 1454 aa14.84□□□□□ -0.03
RTN3-203ENST00000341307 INSRP06213 1382 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms