RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 TULP4Q9NRJ4 1543 aa13.71□□□□□ -0.21
STAU1-201ENST00000340954 METP08581 1390 aa13.71□□□□□ -0.22
STAU1-201ENST00000340954 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
STAU1-201ENST00000340954 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.22
STAU1-201ENST00000340954 E9PSI1 815 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 NME9Q86XW9 330 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 RGS3P49796 1198 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
STAU1-201ENST00000340954 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
STAU1-201ENST00000340954 BCCIPQ9P287 314 aaKnown RBP eCLIP13.69□□□□□ -0.22
STAU1-201ENST00000340954 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
STAU1-201ENST00000340954 MAPK8IP3Q9UPT6 1336 aa13.69□□□□□ -0.22
STAU1-201ENST00000340954 RRS1Q15050 365 aaKnown RBP13.69□□□□□ -0.22
STAU1-201ENST00000340954 SETBP1Q9Y6X0 1596 aa13.69□□□□□ -0.22
STAU1-201ENST00000340954 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
STAU1-201ENST00000340954 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
STAU1-201ENST00000340954 LTKP29376 864 aa13.68□□□□□ -0.22
STAU1-201ENST00000340954 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
STAU1-201ENST00000340954 PMFBP1Q8TBY8 1022 aa13.67□□□□□ -0.22
STAU1-201ENST00000340954 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
STAU1-201ENST00000340954 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
STAU1-201ENST00000340954 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
STAU1-201ENST00000340954 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
STAU1-201ENST00000340954 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
STAU1-201ENST00000340954 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
STAU1-201ENST00000340954 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
STAU1-201ENST00000340954 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
STAU1-201ENST00000340954 ATAD2Q6PL18 1390 aa13.66□□□□□ -0.22
STAU1-201ENST00000340954 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
STAU1-201ENST00000340954 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
STAU1-201ENST00000340954 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
STAU1-201ENST00000340954 TNRQ92752 1358 aa13.66□□□□□ -0.22
STAU1-201ENST00000340954 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
STAU1-201ENST00000340954 RIPK4P57078 832 aa13.65□□□□□ -0.22
STAU1-201ENST00000340954 ALKQ9UM73 1620 aa13.65□□□□□ -0.22
STAU1-201ENST00000340954 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
STAU1-201ENST00000340954 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
STAU1-201ENST00000340954 PTPRMP28827 1452 aa13.65□□□□□ -0.22
STAU1-201ENST00000340954 NBR1Q14596 966 aa13.64□□□□□ -0.23
STAU1-201ENST00000340954 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
STAU1-201ENST00000340954 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
STAU1-201ENST00000340954 EID1Q9Y6B2 187 aa13.64□□□□□ -0.23
STAU1-201ENST00000340954 NEFMP07197 916 aa13.63□□□□□ -0.23
STAU1-201ENST00000340954 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
STAU1-201ENST00000340954 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
STAU1-201ENST00000340954 ZNF592Q92610 1267 aa13.63□□□□□ -0.23
STAU1-201ENST00000340954 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
STAU1-201ENST00000340954 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
STAU1-201ENST00000340954 ZFYVE9O95405 1425 aa13.62□□□□□ -0.23
STAU1-201ENST00000340954 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
STAU1-201ENST00000340954 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
STAU1-201ENST00000340954 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
STAU1-201ENST00000340954 COG3Q96JB2 828 aa13.61□□□□□ -0.23
STAU1-201ENST00000340954 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
STAU1-201ENST00000340954 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
STAU1-201ENST00000340954 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
STAU1-201ENST00000340954 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
STAU1-201ENST00000340954 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
STAU1-201ENST00000340954 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
STAU1-201ENST00000340954 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 PDE4AP27815 886 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
STAU1-201ENST00000340954 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
STAU1-201ENST00000340954 PHACTR3Q96KR7 559 aa13.59□□□□□ -0.23
STAU1-201ENST00000340954 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
STAU1-201ENST00000340954 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
STAU1-201ENST00000340954 PUS7Q96PZ0 661 aaKnown RBP13.59□□□□□ -0.23
STAU1-201ENST00000340954 MYH16Q9H6N6 1097 aa13.59□□□□□ -0.23
STAU1-201ENST00000340954 ZNF526Q8TF50 670 aaPredicted RBP13.58□□□□□ -0.24
STAU1-201ENST00000340954 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
STAU1-201ENST00000340954 RLBP1P12271 317 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 ADRA2BP18089 450 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
STAU1-201ENST00000340954 NGDNQ8NEJ9 315 aaKnown RBP13.58□□□□□ -0.24
STAU1-201ENST00000340954 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
STAU1-201ENST00000340954 PRR36Q9H6K5 1346 aa13.57□□□□□ -0.24
STAU1-201ENST00000340954 INSRP06213 1382 aa13.57□□□□□ -0.24
STAU1-201ENST00000340954 IGHDP01880 384 aa13.57□□□□□ -0.24
STAU1-201ENST00000340954 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
STAU1-201ENST00000340954 FAM83GA6ND36 823 aa13.56□□□□□ -0.24
STAU1-201ENST00000340954 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
STAU1-201ENST00000340954 ACEP12821 1306 aa13.56□□□□□ -0.24
STAU1-201ENST00000340954 NSD2O96028 1365 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 AGLP35573 1532 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 ARHGEF40Q8TER5 1519 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 PLEKHF1Q96S99 279 aa13.55□□□□□ -0.24
STAU1-201ENST00000340954 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
STAU1-201ENST00000340954 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
STAU1-201ENST00000340954 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
STAU1-201ENST00000340954 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms