RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 AK7Q96M32 723 aa15.91■□□□□ 0.14
LIN54-201ENST00000340417 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
LIN54-201ENST00000340417 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
LIN54-201ENST00000340417 ATP7AQ04656 1500 aa15.9■□□□□ 0.14
LIN54-201ENST00000340417 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
LIN54-201ENST00000340417 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
LIN54-201ENST00000340417 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
LIN54-201ENST00000340417 CABLES1Q8TDN4 633 aa15.89■□□□□ 0.13
LIN54-201ENST00000340417 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
LIN54-201ENST00000340417 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
LIN54-201ENST00000340417 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
LIN54-201ENST00000340417 VPS53Q5VIR6 699 aa15.89■□□□□ 0.13
LIN54-201ENST00000340417 GNAT3A8MTJ3 354 aa15.88■□□□□ 0.13
LIN54-201ENST00000340417 ANKRD24Q8TF21 1146 aa15.88■□□□□ 0.13
LIN54-201ENST00000340417 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
LIN54-201ENST00000340417 APPP05067 770 aa15.87■□□□□ 0.13
LIN54-201ENST00000340417 UBTFL1P0CB47 393 aaPredicted RBP15.87■□□□□ 0.13
LIN54-201ENST00000340417 DDB1Q16531 1140 aa15.87■□□□□ 0.13
LIN54-201ENST00000340417 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
LIN54-201ENST00000340417 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
LIN54-201ENST00000340417 YEATS2Q9ULM3 1422 aa15.85■□□□□ 0.13
LIN54-201ENST00000340417 PHF14O94880 888 aa15.85■□□□□ 0.13
LIN54-201ENST00000340417 ADAMTS8Q9UP79 889 aa15.85■□□□□ 0.13
LIN54-201ENST00000340417 KIF16BQ96L93 1317 aa15.85■□□□□ 0.13
LIN54-201ENST00000340417 GOLGA6L4A6NEF3 574 aa15.85■□□□□ 0.13
LIN54-201ENST00000340417 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
LIN54-201ENST00000340417 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
LIN54-201ENST00000340417 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
LIN54-201ENST00000340417 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
LIN54-201ENST00000340417 KDM6BO15054 1643 aa15.84■□□□□ 0.13
LIN54-201ENST00000340417 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.13
LIN54-201ENST00000340417 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.12
LIN54-201ENST00000340417 FYB1O15117 783 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 MARCH6O60337 910 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
LIN54-201ENST00000340417 DZIP1LQ8IYY4 767 aaKnown RBP15.82■□□□□ 0.12
LIN54-201ENST00000340417 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 MPHOSPH8Q99549 860 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 ZNF428Q96B54 188 aa15.82■□□□□ 0.12
LIN54-201ENST00000340417 FCHSD2O94868 740 aa15.81■□□□□ 0.12
LIN54-201ENST00000340417 GNL3LQ9NVN8 582 aaKnown RBP15.81■□□□□ 0.12
LIN54-201ENST00000340417 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
LIN54-201ENST00000340417 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
LIN54-201ENST00000340417 RFC4P35249 363 aa15.8■□□□□ 0.12
LIN54-201ENST00000340417 RBM5P52756 815 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIN54-201ENST00000340417 CCAR1Q8IX12 1150 aaKnown RBP15.8■□□□□ 0.12
LIN54-201ENST00000340417 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
LIN54-201ENST00000340417 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
LIN54-201ENST00000340417 DHX16O60231 1041 aaKnown RBP15.8■□□□□ 0.12
LIN54-201ENST00000340417 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
LIN54-201ENST00000340417 USP21Q9UK80 565 aa15.79■□□□□ 0.12
LIN54-201ENST00000340417 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
LIN54-201ENST00000340417 POLD1P28340 1107 aa15.79■□□□□ 0.12
LIN54-201ENST00000340417 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
LIN54-201ENST00000340417 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
LIN54-201ENST00000340417 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
LIN54-201ENST00000340417 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
LIN54-201ENST00000340417 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
LIN54-201ENST00000340417 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.12
LIN54-201ENST00000340417 TCEAL9Q9UHQ7 104 aa15.77■□□□□ 0.12
LIN54-201ENST00000340417 AKAP17AQ02040 695 aaKnown RBP15.77■□□□□ 0.11
LIN54-201ENST00000340417 GNAI3P08754 354 aa15.76■□□□□ 0.11
LIN54-201ENST00000340417 CCDC57Q2TAC2 916 aa15.76■□□□□ 0.11
LIN54-201ENST00000340417 MAPKBP1O60336 1514 aa15.76■□□□□ 0.11
LIN54-201ENST00000340417 WASHC4Q2M389 1173 aa15.76■□□□□ 0.11
LIN54-201ENST00000340417 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
LIN54-201ENST00000340417 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
LIN54-201ENST00000340417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
LIN54-201ENST00000340417 ZCCHC11Q5TAX3 1644 aaKnown RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 IL2RBP14784 551 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 NFE2L2Q16236 605 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 RUFY2Q8WXA3 655 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 TEX13AQ9BXU3 409 aaPredicted RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
LIN54-201ENST00000340417 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
LIN54-201ENST00000340417 MCM10Q7L590 875 aa15.74■□□□□ 0.11
LIN54-201ENST00000340417 RASSF8Q8NHQ8 419 aa15.74■□□□□ 0.11
LIN54-201ENST00000340417 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
LIN54-201ENST00000340417 TFCP2L1Q9NZI6 479 aa15.74■□□□□ 0.11
LIN54-201ENST00000340417 MIS18AQ9NYP9 233 aa15.74■□□□□ 0.11
LIN54-201ENST00000340417 TRPM2O94759 1503 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
LIN54-201ENST00000340417 ABCA8O94911 1581 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 ERC2O15083 957 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 A0A087WZG4 1122 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
LIN54-201ENST00000340417 TRDNQ13061 729 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
LIN54-201ENST00000340417 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
LIN54-201ENST00000340417 ATP6V1AP38606 617 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms