RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 USP6P35125 1406 aa20.11■□□□□ 0.81
CSRP1-201ENST00000340006 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
CSRP1-201ENST00000340006 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
CSRP1-201ENST00000340006 FYB1O15117 783 aa20.09■□□□□ 0.81
CSRP1-201ENST00000340006 AMER1Q5JTC6 1135 aaPredicted RBP20.09■□□□□ 0.81
CSRP1-201ENST00000340006 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
CSRP1-201ENST00000340006 MON2Q7Z3U7 1717 aa20.08■□□□□ 0.81
CSRP1-201ENST00000340006 GGNBP2Q9H3C7 697 aa20.08■□□□□ 0.81
CSRP1-201ENST00000340006 NME9Q86XW9 330 aa20.07■□□□□ 0.8
CSRP1-201ENST00000340006 TTC21AQ8NDW8 1320 aa20.07■□□□□ 0.8
CSRP1-201ENST00000340006 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
CSRP1-201ENST00000340006 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
CSRP1-201ENST00000340006 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
CSRP1-201ENST00000340006 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
CSRP1-201ENST00000340006 NLRP6P59044 892 aa20.04■□□□□ 0.8
CSRP1-201ENST00000340006 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
CSRP1-201ENST00000340006 ZRANB1Q9UGI0 708 aa20.04■□□□□ 0.8
CSRP1-201ENST00000340006 BRD4O60885 1362 aaPredicted RBP20.04■□□□□ 0.8
CSRP1-201ENST00000340006 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
CSRP1-201ENST00000340006 COG3Q96JB2 828 aa20.04■□□□□ 0.8
CSRP1-201ENST00000340006 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
CSRP1-201ENST00000340006 SSH2Q76I76 1423 aa20.03■□□□□ 0.8
CSRP1-201ENST00000340006 RALBP1Q15311 655 aa20.02■□□□□ 0.8
CSRP1-201ENST00000340006 KIF20BQ96Q89 1820 aa20.01■□□□□ 0.79
CSRP1-201ENST00000340006 SOS2Q07890 1332 aaPredicted RBP20.01■□□□□ 0.79
CSRP1-201ENST00000340006 NLRP13Q86W25 1043 aa20.01■□□□□ 0.79
CSRP1-201ENST00000340006 NPC1L1Q9UHC9 1359 aa20.01■□□□□ 0.79
CSRP1-201ENST00000340006 NSD2O96028 1365 aa20■□□□□ 0.79
CSRP1-201ENST00000340006 LRRC59Q96AG4 307 aaKnown RBP19.99■□□□□ 0.79
CSRP1-201ENST00000340006 NRKQ7Z2Y5 1582 aa19.99■□□□□ 0.79
CSRP1-201ENST00000340006 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
CSRP1-201ENST00000340006 SOX12O15370 315 aa19.99■□□□□ 0.79
CSRP1-201ENST00000340006 PXDNQ92626 1479 aa19.98■□□□□ 0.79
CSRP1-201ENST00000340006 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
CSRP1-201ENST00000340006 NHSL1Q5SYE7 1610 aa19.97■□□□□ 0.79
CSRP1-201ENST00000340006 TRPM3Q9HCF6 1732 aaPredicted RBP19.96■□□□□ 0.79
CSRP1-201ENST00000340006 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
CSRP1-201ENST00000340006 FBLN1P23142 703 aa19.95■□□□□ 0.78
CSRP1-201ENST00000340006 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
CSRP1-201ENST00000340006 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
CSRP1-201ENST00000340006 TNS3Q68CZ2 1445 aa19.94■□□□□ 0.78
CSRP1-201ENST00000340006 ARHGEF10O15013 1369 aa19.93■□□□□ 0.78
CSRP1-201ENST00000340006 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
CSRP1-201ENST00000340006 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
CSRP1-201ENST00000340006 USP31Q70CQ4 1352 aa19.93■□□□□ 0.78
CSRP1-201ENST00000340006 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
CSRP1-201ENST00000340006 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
CSRP1-201ENST00000340006 CABLES1Q8TDN4 633 aa19.92■□□□□ 0.78
CSRP1-201ENST00000340006 MYBBP1AQ9BQG0 1328 aaKnown RBP19.92■□□□□ 0.78
CSRP1-201ENST00000340006 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
CSRP1-201ENST00000340006 KCNH5Q8NCM2 988 aa19.91■□□□□ 0.78
CSRP1-201ENST00000340006 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
CSRP1-201ENST00000340006 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
CSRP1-201ENST00000340006 GCP02774 474 aa19.9■□□□□ 0.78
CSRP1-201ENST00000340006 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
CSRP1-201ENST00000340006 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
CSRP1-201ENST00000340006 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.78
CSRP1-201ENST00000340006 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.78
CSRP1-201ENST00000340006 MTHFSP49914 203 aa19.89■□□□□ 0.77
CSRP1-201ENST00000340006 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CSRP1-201ENST00000340006 HSPA1LP34931 641 aa19.88■□□□□ 0.77
CSRP1-201ENST00000340006 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
CSRP1-201ENST00000340006 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
CSRP1-201ENST00000340006 AMPHP49418 695 aa19.85■□□□□ 0.77
CSRP1-201ENST00000340006 COL16A1Q07092 1604 aaPredicted RBP19.85■□□□□ 0.77
CSRP1-201ENST00000340006 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
CSRP1-201ENST00000340006 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
CSRP1-201ENST00000340006 MARF1Q9Y4F3 1742 aaKnown RBP19.84■□□□□ 0.77
CSRP1-201ENST00000340006 CCER2I3L3R5 266 aa19.84■□□□□ 0.77
CSRP1-201ENST00000340006 USP19O94966 1318 aa19.84■□□□□ 0.77
CSRP1-201ENST00000340006 AATKQ6ZMQ8 1374 aa19.83■□□□□ 0.77
CSRP1-201ENST00000340006 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
CSRP1-201ENST00000340006 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.76
CSRP1-201ENST00000340006 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.76
CSRP1-201ENST00000340006 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.76
CSRP1-201ENST00000340006 CCDC184Q52MB2 194 aa19.82■□□□□ 0.76
CSRP1-201ENST00000340006 USP54Q70EL1 1684 aa19.82■□□□□ 0.76
CSRP1-201ENST00000340006 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
CSRP1-201ENST00000340006 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
CSRP1-201ENST00000340006 MED1Q15648 1581 aaPredicted RBP19.81■□□□□ 0.76
CSRP1-201ENST00000340006 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
CSRP1-201ENST00000340006 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
CSRP1-201ENST00000340006 JCADQ9P266 1359 aa19.79■□□□□ 0.76
CSRP1-201ENST00000340006 SLIT3O75094 1523 aa19.79■□□□□ 0.76
CSRP1-201ENST00000340006 PHRF1Q9P1Y6 1649 aaKnown RBP19.77■□□□□ 0.76
CSRP1-201ENST00000340006 PRDM11Q9NQV5 511 aa19.77■□□□□ 0.76
CSRP1-201ENST00000340006 LTN1O94822 1766 aa19.77■□□□□ 0.76
CSRP1-201ENST00000340006 ADAMTS2O95450 1211 aa19.77■□□□□ 0.75
CSRP1-201ENST00000340006 CHRNA2Q15822 529 aa19.77■□□□□ 0.75
CSRP1-201ENST00000340006 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.75
CSRP1-201ENST00000340006 NFAT5O94916 1531 aa19.75■□□□□ 0.75
CSRP1-201ENST00000340006 HOXC9P31274 260 aa19.75■□□□□ 0.75
CSRP1-201ENST00000340006 IP6K1Q92551 441 aa19.75■□□□□ 0.75
CSRP1-201ENST00000340006 KIAA0232Q92628 1395 aa19.75■□□□□ 0.75
CSRP1-201ENST00000340006 DIAPH1O60610 1272 aaKnown RBP19.75■□□□□ 0.75
CSRP1-201ENST00000340006 LTV1Q96GA3 475 aaPredicted RBP19.75■□□□□ 0.75
CSRP1-201ENST00000340006 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
CSRP1-201ENST00000340006 CRYBG1Q9Y4K1 1723 aa19.74■□□□□ 0.75
CSRP1-201ENST00000340006 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
CSRP1-201ENST00000340006 FLT4P35916 1363 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms