RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
MBD1-203ENST00000339998 TECPR2O15040 1411 aa20.23■□□□□ 0.83
MBD1-203ENST00000339998 CPS1P31327 1500 aa20.23■□□□□ 0.83
MBD1-203ENST00000339998 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
MBD1-203ENST00000339998 HMOX1P09601 288 aa20.22■□□□□ 0.83
MBD1-203ENST00000339998 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
MBD1-203ENST00000339998 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
MBD1-203ENST00000339998 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
MBD1-203ENST00000339998 PLEKHF1Q96S99 279 aa20.2■□□□□ 0.82
MBD1-203ENST00000339998 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
MBD1-203ENST00000339998 ATP7BP35670 1465 aa20.2■□□□□ 0.82
MBD1-203ENST00000339998 ACEP12821 1306 aa20.2■□□□□ 0.82
MBD1-203ENST00000339998 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
MBD1-203ENST00000339998 IQSEC2Q5JU85 1478 aa20.19■□□□□ 0.82
MBD1-203ENST00000339998 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
MBD1-203ENST00000339998 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
MBD1-203ENST00000339998 KCNA6P17658 529 aa20.19■□□□□ 0.82
MBD1-203ENST00000339998 SIRT1Q96EB6 747 aa20.18■□□□□ 0.82
MBD1-203ENST00000339998 MED14O60244 1454 aa20.18■□□□□ 0.82
MBD1-203ENST00000339998 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
MBD1-203ENST00000339998 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
MBD1-203ENST00000339998 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
MBD1-203ENST00000339998 ANKRD26Q9UPS8 1709 aa20.17■□□□□ 0.82
MBD1-203ENST00000339998 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
MBD1-203ENST00000339998 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
MBD1-203ENST00000339998 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
MBD1-203ENST00000339998 RIMS1Q86UR5 1692 aaKnown RBP20.16■□□□□ 0.82
MBD1-203ENST00000339998 ARHGAP23Q9P227 1491 aa20.16■□□□□ 0.82
MBD1-203ENST00000339998 COG3Q96JB2 828 aa20.16■□□□□ 0.82
MBD1-203ENST00000339998 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
MBD1-203ENST00000339998 FRAT1Q92837 279 aaPredicted RBP20.15■□□□□ 0.82
MBD1-203ENST00000339998 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
MBD1-203ENST00000339998 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
MBD1-203ENST00000339998 SLIT1O75093 1534 aa20.14■□□□□ 0.82
MBD1-203ENST00000339998 PRKAR2BP31323 418 aa20.14■□□□□ 0.82
MBD1-203ENST00000339998 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
MBD1-203ENST00000339998 RIPK4P57078 832 aa20.13■□□□□ 0.81
MBD1-203ENST00000339998 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
MBD1-203ENST00000339998 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
MBD1-203ENST00000339998 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
MBD1-203ENST00000339998 PANK1Q8TE04 598 aa20.12■□□□□ 0.81
MBD1-203ENST00000339998 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
MBD1-203ENST00000339998 NUTM2GQ5VZR2 741 aa20.11■□□□□ 0.81
MBD1-203ENST00000339998 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
MBD1-203ENST00000339998 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
MBD1-203ENST00000339998 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
MBD1-203ENST00000339998 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
MBD1-203ENST00000339998 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
MBD1-203ENST00000339998 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
MBD1-203ENST00000339998 IL13P35225 146 aa20.08■□□□□ 0.81
MBD1-203ENST00000339998 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
MBD1-203ENST00000339998 CLUAP1Q96AJ1 413 aa20.08■□□□□ 0.81
MBD1-203ENST00000339998 CEP170BQ9Y4F5 1589 aaPredicted RBP20.08■□□□□ 0.81
MBD1-203ENST00000339998 RARSP54136 660 aaKnown RBP20.08■□□□□ 0.8
MBD1-203ENST00000339998 COG6Q9Y2V7 657 aa20.08■□□□□ 0.8
MBD1-203ENST00000339998 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.8
MBD1-203ENST00000339998 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
MBD1-203ENST00000339998 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
MBD1-203ENST00000339998 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
MBD1-203ENST00000339998 PLEKHG3A1L390 1219 aa20.07■□□□□ 0.8
MBD1-203ENST00000339998 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
MBD1-203ENST00000339998 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
MBD1-203ENST00000339998 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
MBD1-203ENST00000339998 MON2Q7Z3U7 1717 aa20.06■□□□□ 0.8
MBD1-203ENST00000339998 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
MBD1-203ENST00000339998 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
MBD1-203ENST00000339998 ITSN1Q15811 1721 aa20.05■□□□□ 0.8
MBD1-203ENST00000339998 ADGRB2O60241 1585 aa20.05■□□□□ 0.8
MBD1-203ENST00000339998 HSP90AB2PQ58FF8 381 aa20.05■□□□□ 0.8
MBD1-203ENST00000339998 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
MBD1-203ENST00000339998 AKAP12Q02952 1782 aa20.05■□□□□ 0.8
MBD1-203ENST00000339998 FCHSD2O94868 740 aa20.04■□□□□ 0.8
MBD1-203ENST00000339998 RLBP1P12271 317 aa20.04■□□□□ 0.8
MBD1-203ENST00000339998 USP6P35125 1406 aa20.04■□□□□ 0.8
MBD1-203ENST00000339998 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
MBD1-203ENST00000339998 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
MBD1-203ENST00000339998 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
MBD1-203ENST00000339998 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
MBD1-203ENST00000339998 PAK3O75914 559 aaPredicted RBP20.01■□□□□ 0.79
MBD1-203ENST00000339998 EIF4A2Q14240 407 aaKnown RBP20.01■□□□□ 0.79
MBD1-203ENST00000339998 PTCH1Q13635 1447 aa20■□□□□ 0.79
MBD1-203ENST00000339998 MSH5O43196 834 aa19.99■□□□□ 0.79
MBD1-203ENST00000339998 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
MBD1-203ENST00000339998 AATKQ6ZMQ8 1374 aa19.99■□□□□ 0.79
MBD1-203ENST00000339998 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
MBD1-203ENST00000339998 SULT6B1Q6IMI4 303 aa19.99■□□□□ 0.79
MBD1-203ENST00000339998 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
MBD1-203ENST00000339998 TCERG1O14776 1098 aaKnown RBP19.98■□□□□ 0.79
MBD1-203ENST00000339998 CDK12Q9NYV4 1490 aaPredicted RBP19.97■□□□□ 0.79
MBD1-203ENST00000339998 NEFMP07197 916 aa19.97■□□□□ 0.79
MBD1-203ENST00000339998 NLRP6P59044 892 aa19.97■□□□□ 0.79
MBD1-203ENST00000339998 SSH1Q8WYL5 1049 aa19.97■□□□□ 0.79
MBD1-203ENST00000339998 OVOS2A0A0J9YW53 1432 aa19.97■□□□□ 0.79
MBD1-203ENST00000339998 OVOS2Q6IE36 1432 aa19.97■□□□□ 0.79
MBD1-203ENST00000339998 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
MBD1-203ENST00000339998 IGHDP01880 384 aa19.96■□□□□ 0.79
MBD1-203ENST00000339998 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
MBD1-203ENST00000339998 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
MBD1-203ENST00000339998 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
MBD1-203ENST00000339998 SMC4Q9NTJ3 1288 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms