RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TANGO6Q9C0B7 1094 aa15.24■□□□□ 0.03
USP47-202ENST00000339865 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
USP47-202ENST00000339865 CFAP57Q96MR6 1250 aa15.24■□□□□ 0.03
USP47-202ENST00000339865 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 RNF187Q5TA31 235 aaPredicted RBP15.23■□□□□ 0.03
USP47-202ENST00000339865 PDCL2Q8N4E4 241 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 EEA1Q15075 1411 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 ZHX3Q9H4I2 956 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 UBE4AQ14139 1066 aa15.23■□□□□ 0.03
USP47-202ENST00000339865 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
USP47-202ENST00000339865 FIBPO43427 364 aa15.22■□□□□ 0.03
USP47-202ENST00000339865 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP47-202ENST00000339865 NLRP13Q86W25 1043 aa15.22■□□□□ 0.03
USP47-202ENST00000339865 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
USP47-202ENST00000339865 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
USP47-202ENST00000339865 NUTM2AQ8IVF1 878 aaPredicted RBP15.22■□□□□ 0.03
USP47-202ENST00000339865 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
USP47-202ENST00000339865 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
USP47-202ENST00000339865 MBD3O95983 291 aa15.21■□□□□ 0.03
USP47-202ENST00000339865 SSR1P43307 286 aaKnown RBP15.21■□□□□ 0.03
USP47-202ENST00000339865 KIAA1328Q86T90 577 aa15.21■□□□□ 0.03
USP47-202ENST00000339865 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 NEBLO76041 1014 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 CLGNO14967 610 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 STIM1Q13586 685 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 CALCOCO1Q9P1Z2 691 aa15.2■□□□□ 0.02
USP47-202ENST00000339865 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
USP47-202ENST00000339865 ANAPC15P60006 121 aa15.19■□□□□ 0.02
USP47-202ENST00000339865 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
USP47-202ENST00000339865 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
USP47-202ENST00000339865 PSMA5P28066 241 aa15.19■□□□□ 0.02
USP47-202ENST00000339865 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
USP47-202ENST00000339865 TNMDQ9H2S6 317 aa15.18■□□□□ 0.02
USP47-202ENST00000339865 TEFQ10587 303 aa15.18■□□□□ 0.02
USP47-202ENST00000339865 UBXN4Q92575 508 aa15.18■□□□□ 0.02
USP47-202ENST00000339865 NUTM2DQ5VT03 806 aaPredicted RBP15.18■□□□□ 0.02
USP47-202ENST00000339865 ERC2O15083 957 aa15.18■□□□□ 0.02
USP47-202ENST00000339865 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
USP47-202ENST00000339865 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
USP47-202ENST00000339865 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
USP47-202ENST00000339865 TTC16Q8NEE8 873 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
USP47-202ENST00000339865 SMC1AQ14683 1233 aaKnown RBP15.17■□□□□ 0.02
USP47-202ENST00000339865 CCDC160A6NGH7 325 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 KIF3BO15066 747 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 DAAM2Q86T65 1068 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
USP47-202ENST00000339865 PDCP20941 246 aa15.16■□□□□ 0.02
USP47-202ENST00000339865 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
USP47-202ENST00000339865 GRIPAP1Q4V328 841 aa15.16■□□□□ 0.02
USP47-202ENST00000339865 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
USP47-202ENST00000339865 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 MNAT1P51948 309 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 WDR78Q5VTH9 848 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 PKD2Q13563 968 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
USP47-202ENST00000339865 TTC5Q8N0Z6 440 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 GTF2A1P52655 376 aaPredicted RBP15.15■□□□□ 0.02
USP47-202ENST00000339865 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
USP47-202ENST00000339865 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
USP47-202ENST00000339865 CCDC175P0C221 793 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 JAKMIP3Q5VZ66 844 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 ZWINTO95229 277 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 ME1P48163 572 aa15.15■□□□□ 0.02
USP47-202ENST00000339865 STK38Q15208 465 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 MAP9Q49MG5 647 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 PSMD1Q99460 953 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
USP47-202ENST00000339865 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
USP47-202ENST00000339865 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
USP47-202ENST00000339865 DESP17661 470 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 MICALCLQ6ZW33 695 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 GRPEL1Q9HAV7 217 aa15.14■□□□□ 0.01
USP47-202ENST00000339865 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
USP47-202ENST00000339865 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
USP47-202ENST00000339865 DACH1Q9UI36 760 aa15.13■□□□□ 0.01
USP47-202ENST00000339865 MATR3P43243 847 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■■■■ 30.2
USP47-202ENST00000339865 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP47-202ENST00000339865 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
USP47-202ENST00000339865 GSTTP1A0A1W2PQM5 241 aa15.13■□□□□ 0.01
USP47-202ENST00000339865 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
USP47-202ENST00000339865 CNTROBQ8N137 903 aa15.13■□□□□ 0.01
USP47-202ENST00000339865 NEK4P51957 841 aa15.12■□□□□ 0.01
USP47-202ENST00000339865 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
USP47-202ENST00000339865 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
USP47-202ENST00000339865 FAM107BQ9H098 131 aa15.12■□□□□ 0.01
USP47-202ENST00000339865 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
USP47-202ENST00000339865 ARHGAP29Q52LW3 1261 aa15.11■□□□□ 0.01
USP47-202ENST00000339865 TAF4BQ92750 862 aa15.11■□□□□ 0.01
USP47-202ENST00000339865 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
USP47-202ENST00000339865 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
USP47-202ENST00000339865 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms