RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 SMG6Q86US8 1419 aaKnown RBP6.71□□□□□ -1.34
MSL1-201ENST00000339569 USP47Q96K76 1375 aa6.71□□□□□ -1.34
MSL1-201ENST00000339569 NKTRP30414 1462 aaKnown RBP6.71□□□□□ -1.34
MSL1-201ENST00000339569 SEMA3EO15041 775 aa6.71□□□□□ -1.34
MSL1-201ENST00000339569 PPM1GO15355 546 aaPredicted RBP6.71□□□□□ -1.34
MSL1-201ENST00000339569 TULP4Q9NRJ4 1543 aa6.71□□□□□ -1.34
MSL1-201ENST00000339569 DISP3Q9P2K9 1392 aa6.71□□□□□ -1.34
MSL1-201ENST00000339569 KCNH8Q96L42 1107 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 CAMTA1Q9Y6Y1 1673 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 ANKARQ7Z5J8 1434 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 EIF4G2P78344 907 aaKnown RBP eCLIP6.7□□□□□ -1.34
MSL1-201ENST00000339569 FAM117AQ9C073 453 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 ZMYM3Q14202 1370 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 TNRQ92752 1358 aa6.7□□□□□ -1.34
MSL1-201ENST00000339569 LTBP4Q8N2S1 1624 aa6.69□□□□□ -1.34
MSL1-201ENST00000339569 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
MSL1-201ENST00000339569 MARF1Q9Y4F3 1742 aaKnown RBP6.69□□□□□ -1.34
MSL1-201ENST00000339569 ZNF777Q9ULD5 760 aaPredicted RBP6.69□□□□□ -1.34
MSL1-201ENST00000339569 SHPRHQ149N8 1683 aa6.69□□□□□ -1.34
MSL1-201ENST00000339569 NBPF8Q3BBV2 869 aa6.69□□□□□ -1.34
MSL1-201ENST00000339569 CHIC2Q9UKJ5 165 aa6.69□□□□□ -1.34
MSL1-201ENST00000339569 DCCP43146 1447 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 PARD3Q8TEW0 1356 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 WDR70Q9NW82 654 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 RIMS2Q9UQ26 1411 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 TMEM2Q9UHN6 1383 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 CARNS1A5YM72 827 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
MSL1-201ENST00000339569 ADAMTS13Q76LX8 1427 aa6.68□□□□□ -1.34
MSL1-201ENST00000339569 VGFO15240 615 aaPredicted RBP6.67□□□□□ -1.34
MSL1-201ENST00000339569 KDM4AO75164 1064 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 TESK2Q96S53 571 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 CRYBG1Q9Y4K1 1723 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 KIF3BO15066 747 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 TRAIPQ9BWF2 469 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 RNF39Q9H2S5 420 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 STRCQ7RTU9 1775 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
MSL1-201ENST00000339569 TRIM52Q96A61 297 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
MSL1-201ENST00000339569 FAM208AQ9UK61 1670 aaKnown RBP6.66□□□□□ -1.34
MSL1-201ENST00000339569 ZMYND10O75800 440 aa6.66□□□□□ -1.34
MSL1-201ENST00000339569 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.66□□□□□ -1.34
MSL1-201ENST00000339569 SIN3AQ96ST3 1273 aa6.66□□□□□ -1.34
MSL1-201ENST00000339569 RGPD1P0DJD0 1748 aa6.66□□□□□ -1.34
MSL1-201ENST00000339569 YTHDC2Q9H6S0 1430 aaKnown RBP6.66□□□□□ -1.34
MSL1-201ENST00000339569 E9PSI1 815 aa6.66□□□□□ -1.34
MSL1-201ENST00000339569 ONECUT3O60422 494 aaPredicted RBP6.66□□□□□ -1.34
MSL1-201ENST00000339569 NGEFQ8N5V2 710 aa6.66□□□□□ -1.34
MSL1-201ENST00000339569 TRPM3Q9HCF6 1732 aaPredicted RBP6.64□□□□□ -1.35
MSL1-201ENST00000339569 CIZ1Q9ULV3 898 aaPredicted RBP6.64□□□□□ -1.35
MSL1-201ENST00000339569 BLMP54132 1417 aaPredicted RBP6.64□□□□□ -1.35
MSL1-201ENST00000339569 CERKQ8TCT0 537 aa6.64□□□□□ -1.35
MSL1-201ENST00000339569 PRDM16Q9HAZ2 1276 aa6.64□□□□□ -1.35
MSL1-201ENST00000339569 CPSF1Q10570 1443 aaKnown RBP6.63□□□□□ -1.35
MSL1-201ENST00000339569 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
MSL1-201ENST00000339569 CD163L1Q9NR16 1453 aa6.63□□□□□ -1.35
MSL1-201ENST00000339569 XIRP1Q702N8 1843 aaKnown RBP6.63□□□□□ -1.35
MSL1-201ENST00000339569 ATAD2Q6PL18 1390 aa6.63□□□□□ -1.35
MSL1-201ENST00000339569 HSPA5P11021 654 aaKnown RBP6.63□□□□□ -1.35
MSL1-201ENST00000339569 RALBP1Q15311 655 aa6.63□□□□□ -1.35
MSL1-201ENST00000339569 TRAK2O60296 914 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 RAPGEF3O95398 923 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 CDK12Q9NYV4 1490 aaPredicted RBP6.62□□□□□ -1.35
MSL1-201ENST00000339569 LMO7Q8WWI1 1683 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 SSH2Q76I76 1423 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 ALS2Q96Q42 1657 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 KIF7Q2M1P5 1343 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 TBX22Q9Y458 520 aa6.62□□□□□ -1.35
MSL1-201ENST00000339569 ADAMTS7Q9UKP4 1686 aa6.61□□□□□ -1.35
MSL1-201ENST00000339569 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
MSL1-201ENST00000339569 ANKRD36BQ8N2N9 1353 aa6.61□□□□□ -1.35
MSL1-201ENST00000339569 SMARCA5O60264 1052 aaPredicted RBP6.61□□□□□ -1.35
MSL1-201ENST00000339569 ZNF219Q9P2Y4 722 aaPredicted RBP6.61□□□□□ -1.35
MSL1-201ENST00000339569 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
MSL1-201ENST00000339569 COL22A1Q8NFW1 1626 aaPredicted RBP6.61□□□□□ -1.35
MSL1-201ENST00000339569 PER1O15534 1290 aaPredicted RBP6.6□□□□□ -1.35
MSL1-201ENST00000339569 N4BP2Q86UW6 1770 aaPredicted RBP6.6□□□□□ -1.35
MSL1-201ENST00000339569 ITGAEP38570 1179 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 FGD1P98174 961 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 FBXW7Q969H0 707 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 COL3A1P02461 1466 aaPredicted RBP6.6□□□□□ -1.35
MSL1-201ENST00000339569 PIK3C2AO00443 1686 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 AATKQ6ZMQ8 1374 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 PLEKHG3A1L390 1219 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 SLIT3O75094 1523 aa6.6□□□□□ -1.35
MSL1-201ENST00000339569 POLR3AO14802 1390 aaPredicted RBP6.59□□□□□ -1.35
MSL1-201ENST00000339569 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
MSL1-201ENST00000339569 NHSL1Q5SYE7 1610 aa6.59□□□□□ -1.35
MSL1-201ENST00000339569 PTPRUQ92729 1446 aa6.59□□□□□ -1.35
MSL1-201ENST00000339569 CACNB1Q02641 598 aaPredicted RBP6.59□□□□□ -1.35
MSL1-201ENST00000339569 NCAPD2Q15021 1401 aa6.59□□□□□ -1.35
MSL1-201ENST00000339569 TMF1P82094 1093 aa6.59□□□□□ -1.36
MSL1-201ENST00000339569 IDI1Q13907 227 aa6.59□□□□□ -1.36
MSL1-201ENST00000339569 PKNOX2Q96KN3 472 aa6.59□□□□□ -1.36
MSL1-201ENST00000339569 PRDM10Q9NQV6 1147 aa6.59□□□□□ -1.36
MSL1-201ENST00000339569 LRRC37A3O60309 1634 aa6.58□□□□□ -1.36
MSL1-201ENST00000339569 PNPLA6Q8IY17 1366 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms