RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
RUNX3-202ENST00000338888 PTMSP20962 102 aa25.43■■□□□ 1.66
RUNX3-202ENST00000338888 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
RUNX3-202ENST00000338888 CLTCL1P53675 1640 aa25.42■■□□□ 1.66
RUNX3-202ENST00000338888 SSFA2P28290 1259 aa25.42■■□□□ 1.66
RUNX3-202ENST00000338888 ATF7IPQ6VMQ6 1270 aa25.42■■□□□ 1.66
RUNX3-202ENST00000338888 CFAP53Q96M91 514 aa25.42■■□□□ 1.66
RUNX3-202ENST00000338888 KIF2CQ99661 725 aa25.42■■□□□ 1.66
RUNX3-202ENST00000338888 NOB1Q9ULX3 412 aaKnown RBP25.42■■□□□ 1.66
RUNX3-202ENST00000338888 TMEM57Q8N5G2 664 aa25.41■■□□□ 1.66
RUNX3-202ENST00000338888 ANP32BQ92688 251 aaKnown RBP25.41■■□□□ 1.66
RUNX3-202ENST00000338888 OFD1O75665 1012 aa25.4■■□□□ 1.66
RUNX3-202ENST00000338888 RBM10P98175 930 aaKnown RBP25.4■■□□□ 1.66
RUNX3-202ENST00000338888 NEO1Q92859 1461 aa25.4■■□□□ 1.66
RUNX3-202ENST00000338888 MSNP26038 577 aaKnown RBP25.4■■□□□ 1.66
RUNX3-202ENST00000338888 NUCB1Q02818 461 aa25.4■■□□□ 1.66
RUNX3-202ENST00000338888 RBM42Q9BTD8 480 aaKnown RBP25.39■■□□□ 1.66
RUNX3-202ENST00000338888 MLH3Q9UHC1 1453 aa25.39■■□□□ 1.65
RUNX3-202ENST00000338888 PTPRTO14522 1441 aa25.39■■□□□ 1.65
RUNX3-202ENST00000338888 DDX49Q9Y6V7 483 aaKnown RBP25.39■■□□□ 1.65
RUNX3-202ENST00000338888 ZBTB40Q9NUA8 1239 aa25.38■■□□□ 1.65
RUNX3-202ENST00000338888 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
RUNX3-202ENST00000338888 K7ELQ4 463 aaPredicted RBP25.38■■□□□ 1.65
RUNX3-202ENST00000338888 TET3O43151 1660 aa25.38■■□□□ 1.65
RUNX3-202ENST00000338888 HECW2Q9P2P5 1572 aa25.38■■□□□ 1.65
RUNX3-202ENST00000338888 GOLGA6L22H0YM25 854 aa25.37■■□□□ 1.65
RUNX3-202ENST00000338888 CT47B1P0C2W7 299 aaPredicted RBP25.37■■□□□ 1.65
RUNX3-202ENST00000338888 CHD1LQ86WJ1 897 aa25.36■■□□□ 1.65
RUNX3-202ENST00000338888 VWDEQ8N2E2 1590 aa25.36■■□□□ 1.65
RUNX3-202ENST00000338888 GAS2L2Q8NHY3 880 aa25.36■■□□□ 1.65
RUNX3-202ENST00000338888 RIPK4P57078 832 aa25.35■■□□□ 1.65
RUNX3-202ENST00000338888 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.34■■□□□ 1.65
RUNX3-202ENST00000338888 KLHL40Q2TBA0 621 aa25.34■■□□□ 1.65
RUNX3-202ENST00000338888 MAP3K4Q9Y6R4 1608 aa25.33■■□□□ 1.65
RUNX3-202ENST00000338888 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
RUNX3-202ENST00000338888 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.65
RUNX3-202ENST00000338888 BAG4O95429 457 aaKnown RBP25.33■■□□□ 1.64
RUNX3-202ENST00000338888 BMP2KLQ5H9B9 411 aa25.33■■□□□ 1.64
RUNX3-202ENST00000338888 TRAK1Q9UPV9 953 aa25.32■■□□□ 1.64
RUNX3-202ENST00000338888 R3HCC1Q9Y3T6 440 aaKnown RBP25.32■■□□□ 1.64
RUNX3-202ENST00000338888 ABCA6Q8N139 1617 aa25.32■■□□□ 1.64
RUNX3-202ENST00000338888 UGGT1Q9NYU2 1555 aa25.32■■□□□ 1.64
RUNX3-202ENST00000338888 ANKRD45Q5TZF3 282 aa25.31■■□□□ 1.64
RUNX3-202ENST00000338888 FAM13BQ9NYF5 915 aa25.31■■□□□ 1.64
RUNX3-202ENST00000338888 NCLP19338 710 aaKnown RBP25.3■■□□□ 1.64
RUNX3-202ENST00000338888 CHGAP10645 457 aaKnown RBP25.3■■□□□ 1.64
RUNX3-202ENST00000338888 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
RUNX3-202ENST00000338888 TBC1D9Q6ZT07 1266 aa25.29■■□□□ 1.64
RUNX3-202ENST00000338888 TSPOAP1O95153 1857 aa25.28■■□□□ 1.64
RUNX3-202ENST00000338888 U2SURPO15042 1029 aaKnown RBP25.28■■□□□ 1.64
RUNX3-202ENST00000338888 TRIM35Q9UPQ4 493 aa25.28■■□□□ 1.64
RUNX3-202ENST00000338888 IBTKQ9P2D0 1353 aaPredicted RBP25.28■■□□□ 1.64
RUNX3-202ENST00000338888 YEATS2Q9ULM3 1422 aa25.28■■□□□ 1.64
RUNX3-202ENST00000338888 TMPOP42166 694 aaKnown RBP25.27■■□□□ 1.64
RUNX3-202ENST00000338888 MCTP1Q6DN14 999 aa25.27■■□□□ 1.64
RUNX3-202ENST00000338888 CLEC17AQ6ZS10 378 aa25.27■■□□□ 1.64
RUNX3-202ENST00000338888 SBNO2Q9Y2G9 1366 aa25.27■■□□□ 1.64
RUNX3-202ENST00000338888 CAVIN1Q6NZI2 390 aaKnown RBP25.27■■□□□ 1.64
RUNX3-202ENST00000338888 CFAP65Q6ZU64 1925 aaKnown RBP25.27■■□□□ 1.64
RUNX3-202ENST00000338888 PPRC1Q5VV67 1664 aaKnown RBP25.26■■□□□ 1.63
RUNX3-202ENST00000338888 EFCAB6Q5THR3 1501 aa25.26■■□□□ 1.63
RUNX3-202ENST00000338888 CALD1Q05682 793 aaKnown RBP25.26■■□□□ 1.63
RUNX3-202ENST00000338888 TERF1P54274 439 aa25.26■■□□□ 1.63
RUNX3-202ENST00000338888 GLI2P10070 1586 aa25.26■■□□□ 1.63
RUNX3-202ENST00000338888 IPO8O15397 1037 aaKnown RBP25.25■■□□□ 1.63
RUNX3-202ENST00000338888 DIP2BQ9P265 1576 aa25.25■■□□□ 1.63
RUNX3-202ENST00000338888 ZNF445P59923 1031 aa25.24■■□□□ 1.63
RUNX3-202ENST00000338888 XPCQ01831 940 aaPredicted RBP25.24■■□□□ 1.63
RUNX3-202ENST00000338888 RBSNQ9H1K0 784 aa25.23■■□□□ 1.63
RUNX3-202ENST00000338888 NOS1P29475 1434 aa25.23■■□□□ 1.63
RUNX3-202ENST00000338888 ZSCAN23Q3MJ62 389 aa25.23■■□□□ 1.63
RUNX3-202ENST00000338888 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
RUNX3-202ENST00000338888 KIF16BQ96L93 1317 aa25.22■■□□□ 1.63
RUNX3-202ENST00000338888 C1orf115Q9H7X2 142 aa25.22■■□□□ 1.63
RUNX3-202ENST00000338888 NOL7Q9UMY1 257 aaKnown RBP25.22■■□□□ 1.63
RUNX3-202ENST00000338888 MYOM2P54296 1465 aa25.22■■□□□ 1.63
RUNX3-202ENST00000338888 DIP2CQ9Y2E4 1556 aa25.22■■□□□ 1.63
RUNX3-202ENST00000338888 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
RUNX3-202ENST00000338888 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.21■■□□□ 1.63
RUNX3-202ENST00000338888 NPATQ14207 1427 aa25.21■■□□□ 1.63
RUNX3-202ENST00000338888 ADGRB2O60241 1585 aa25.2■■□□□ 1.63
RUNX3-202ENST00000338888 AK9Q5TCS8 1911 aa25.2■■□□□ 1.62
RUNX3-202ENST00000338888 HS1BP3Q53T59 392 aa25.2■■□□□ 1.62
RUNX3-202ENST00000338888 ABCC11Q96J66 1382 aa25.19■■□□□ 1.62
RUNX3-202ENST00000338888 UQCRHLA0A096LP55 91 aa25.19■■□□□ 1.62
RUNX3-202ENST00000338888 UQCRHP07919 91 aa25.19■■□□□ 1.62
RUNX3-202ENST00000338888 LMBRD1Q9NUN5 540 aa25.19■■□□□ 1.62
RUNX3-202ENST00000338888 PRDM4Q9UKN5 801 aa25.19■■□□□ 1.62
RUNX3-202ENST00000338888 ZNF500O60304 480 aaPredicted RBP25.18■■□□□ 1.62
RUNX3-202ENST00000338888 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
RUNX3-202ENST00000338888 TMEM132EQ6IEE7 984 aa25.18■■□□□ 1.62
RUNX3-202ENST00000338888 LMTK2Q8IWU2 1503 aa25.18■■□□□ 1.62
RUNX3-202ENST00000338888 PKP1Q13835 747 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 GCC1Q96CN9 775 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 MAP7D2Q96T17 732 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 ARID3AQ99856 593 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 MYO3AQ8NEV4 1616 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 PPIP5K1Q6PFW1 1433 aa25.17■■□□□ 1.62
RUNX3-202ENST00000338888 PDLIM2Q96JY6 352 aa25.16■■□□□ 1.62
RUNX3-202ENST00000338888 ABCC3O15438 1527 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms