RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.75■■□□□ 1.07
PRKN-201ENST00000338468 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
PRKN-201ENST00000338468 GJD4Q96KN9 370 aaPredicted RBP21.75■■□□□ 1.07
PRKN-201ENST00000338468 SRPK2P78362 688 aaKnown RBP21.74■■□□□ 1.07
PRKN-201ENST00000338468 ACEP12821 1306 aa21.73■■□□□ 1.07
PRKN-201ENST00000338468 ARHGEF10O15013 1369 aa21.73■■□□□ 1.07
PRKN-201ENST00000338468 ABCA3Q99758 1704 aa21.72■■□□□ 1.07
PRKN-201ENST00000338468 CABLES1Q8TDN4 633 aa21.72■■□□□ 1.07
PRKN-201ENST00000338468 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
PRKN-201ENST00000338468 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
PRKN-201ENST00000338468 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
PRKN-201ENST00000338468 SBNO2Q9Y2G9 1366 aa21.7■■□□□ 1.06
PRKN-201ENST00000338468 BLMP54132 1417 aaPredicted RBP21.7■■□□□ 1.06
PRKN-201ENST00000338468 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
PRKN-201ENST00000338468 SLIT2O94813 1529 aa21.69■■□□□ 1.06
PRKN-201ENST00000338468 GLI3P10071 1580 aa21.69■■□□□ 1.06
PRKN-201ENST00000338468 CRYBG1Q9Y4K1 1723 aa21.67■■□□□ 1.06
PRKN-201ENST00000338468 CABP1Q9NZU7 370 aa21.67■■□□□ 1.06
PRKN-201ENST00000338468 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
PRKN-201ENST00000338468 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
PRKN-201ENST00000338468 PAK3O75914 559 aaPredicted RBP21.65■■□□□ 1.06
PRKN-201ENST00000338468 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
PRKN-201ENST00000338468 HAP1P54257 671 aaPredicted RBP21.62■■□□□ 1.05
PRKN-201ENST00000338468 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
PRKN-201ENST00000338468 TESK2Q96S53 571 aa21.62■■□□□ 1.05
PRKN-201ENST00000338468 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
PRKN-201ENST00000338468 USP6P35125 1406 aa21.61■■□□□ 1.05
PRKN-201ENST00000338468 SSH2Q76I76 1423 aa21.61■■□□□ 1.05
PRKN-201ENST00000338468 BRWD3Q6RI45 1802 aa21.6■■□□□ 1.05
PRKN-201ENST00000338468 NUTM2GQ5VZR2 741 aa21.59■■□□□ 1.05
PRKN-201ENST00000338468 PHRF1Q9P1Y6 1649 aaKnown RBP21.58■■□□□ 1.05
PRKN-201ENST00000338468 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
PRKN-201ENST00000338468 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
PRKN-201ENST00000338468 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
PRKN-201ENST00000338468 NWD2Q9ULI1 1742 aa21.58■■□□□ 1.04
PRKN-201ENST00000338468 CPSF1Q10570 1443 aaKnown RBP21.57■■□□□ 1.04
PRKN-201ENST00000338468 AKAP12Q02952 1782 aa21.57■■□□□ 1.04
PRKN-201ENST00000338468 VPS72Q15906 364 aa21.57■■□□□ 1.04
PRKN-201ENST00000338468 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
PRKN-201ENST00000338468 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
PRKN-201ENST00000338468 USP47Q96K76 1375 aa21.57■■□□□ 1.04
PRKN-201ENST00000338468 LRP5O75197 1615 aa21.55■■□□□ 1.04
PRKN-201ENST00000338468 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
PRKN-201ENST00000338468 CCDC9Q9Y3X0 531 aaKnown RBP21.55■■□□□ 1.04
PRKN-201ENST00000338468 USP19O94966 1318 aa21.55■■□□□ 1.04
PRKN-201ENST00000338468 CD163L1Q9NR16 1453 aa21.54■■□□□ 1.04
PRKN-201ENST00000338468 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
PRKN-201ENST00000338468 PUS7Q96PZ0 661 aaKnown RBP21.53■■□□□ 1.04
PRKN-201ENST00000338468 COL14A1Q05707 1796 aaKnown RBP21.53■■□□□ 1.04
PRKN-201ENST00000338468 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
PRKN-201ENST00000338468 NRAPQ86VF7 1730 aa21.52■■□□□ 1.04
PRKN-201ENST00000338468 KRT27Q7Z3Y8 459 aa21.52■■□□□ 1.04
PRKN-201ENST00000338468 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.04
PRKN-201ENST00000338468 MON2Q7Z3U7 1717 aa21.51■■□□□ 1.03
PRKN-201ENST00000338468 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
PRKN-201ENST00000338468 KIAA0232Q92628 1395 aa21.5■■□□□ 1.03
PRKN-201ENST00000338468 ONECUT3O60422 494 aaPredicted RBP21.5■■□□□ 1.03
PRKN-201ENST00000338468 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
PRKN-201ENST00000338468 A0A0G2JS52 829 aa21.49■■□□□ 1.03
PRKN-201ENST00000338468 MYT1Q01538 1121 aa21.49■■□□□ 1.03
PRKN-201ENST00000338468 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
PRKN-201ENST00000338468 ZC3H6P61129 1189 aaKnown RBP21.48■■□□□ 1.03
PRKN-201ENST00000338468 NLRP13Q86W25 1043 aa21.48■■□□□ 1.03
PRKN-201ENST00000338468 BTG4Q9NY30 223 aa21.48■■□□□ 1.03
PRKN-201ENST00000338468 SLIT3O75094 1523 aa21.48■■□□□ 1.03
PRKN-201ENST00000338468 BAG6P46379 1132 aa21.47■■□□□ 1.03
PRKN-201ENST00000338468 TMC1Q8TDI8 760 aa21.47■■□□□ 1.03
PRKN-201ENST00000338468 PRDM11Q9NQV5 511 aa21.47■■□□□ 1.03
PRKN-201ENST00000338468 GCP02774 474 aa21.46■■□□□ 1.03
PRKN-201ENST00000338468 NLRP6P59044 892 aa21.46■■□□□ 1.03
PRKN-201ENST00000338468 CHRNA2Q15822 529 aa21.46■■□□□ 1.03
PRKN-201ENST00000338468 CPDO75976 1380 aa21.46■■□□□ 1.03
PRKN-201ENST00000338468 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
PRKN-201ENST00000338468 TTC21AQ8NDW8 1320 aa21.45■■□□□ 1.02
PRKN-201ENST00000338468 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
PRKN-201ENST00000338468 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
PRKN-201ENST00000338468 PSDA5PKW4 1024 aaPredicted RBP21.42■■□□□ 1.02
PRKN-201ENST00000338468 TMF1P82094 1093 aa21.42■■□□□ 1.02
PRKN-201ENST00000338468 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
PRKN-201ENST00000338468 NINLQ9Y2I6 1382 aa21.42■■□□□ 1.02
PRKN-201ENST00000338468 CAMTA1Q9Y6Y1 1673 aa21.41■■□□□ 1.02
PRKN-201ENST00000338468 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
PRKN-201ENST00000338468 RGPD1P0DJD0 1748 aa21.41■■□□□ 1.02
PRKN-201ENST00000338468 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
PRKN-201ENST00000338468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
PRKN-201ENST00000338468 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
PRKN-201ENST00000338468 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
PRKN-201ENST00000338468 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
PRKN-201ENST00000338468 NME9Q86XW9 330 aa21.39■■□□□ 1.01
PRKN-201ENST00000338468 SPATA31A5Q5VU36 1347 aa21.38■■□□□ 1.01
PRKN-201ENST00000338468 SPATA31A7Q8IWB4 1347 aa21.38■■□□□ 1.01
PRKN-201ENST00000338468 NFAT5O94916 1531 aa21.38■■□□□ 1.01
PRKN-201ENST00000338468 COL18A1P39060 1754 aa21.37■■□□□ 1.01
PRKN-201ENST00000338468 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
PRKN-201ENST00000338468 MYOM1P52179 1685 aa21.35■■□□□ 1.01
PRKN-201ENST00000338468 AATKQ6ZMQ8 1374 aa21.35■■□□□ 1.01
PRKN-201ENST00000338468 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
PRKN-201ENST00000338468 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
PRKN-201ENST00000338468 EN1Q05925 392 aaPredicted RBP21.34■■□□□ 1.01
PRKN-201ENST00000338468 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms