RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
SNCA-201ENST00000336904 DIAPH1O60610 1272 aaKnown RBP11.44□□□□□ -0.58
SNCA-201ENST00000336904 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
SNCA-201ENST00000336904 PHACTR3Q96KR7 559 aa11.44□□□□□ -0.58
SNCA-201ENST00000336904 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
SNCA-201ENST00000336904 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
SNCA-201ENST00000336904 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
SNCA-201ENST00000336904 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
SNCA-201ENST00000336904 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
SNCA-201ENST00000336904 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SNCA-201ENST00000336904 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
SNCA-201ENST00000336904 LTKP29376 864 aa11.42□□□□□ -0.58
SNCA-201ENST00000336904 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
SNCA-201ENST00000336904 PLEKHF1Q96S99 279 aa11.42□□□□□ -0.58
SNCA-201ENST00000336904 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
SNCA-201ENST00000336904 FAM83GA6ND36 823 aa11.41□□□□□ -0.58
SNCA-201ENST00000336904 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
SNCA-201ENST00000336904 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
SNCA-201ENST00000336904 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
SNCA-201ENST00000336904 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
SNCA-201ENST00000336904 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
SNCA-201ENST00000336904 PPIP5K1Q6PFW1 1433 aa11.41□□□□□ -0.58
SNCA-201ENST00000336904 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
SNCA-201ENST00000336904 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.58
SNCA-201ENST00000336904 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
SNCA-201ENST00000336904 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
SNCA-201ENST00000336904 NLRP1Q9C000 1473 aa11.4□□□□□ -0.59
SNCA-201ENST00000336904 C8orf34Q49A92 452 aa11.39□□□□□ -0.59
SNCA-201ENST00000336904 SEC24BO95487 1268 aa11.39□□□□□ -0.59
SNCA-201ENST00000336904 ITPRIPQ8IWB1 547 aa11.39□□□□□ -0.59
SNCA-201ENST00000336904 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
SNCA-201ENST00000336904 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
SNCA-201ENST00000336904 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 WDR63Q8IWG1 891 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 TNRQ92752 1358 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 MYT1Q01538 1121 aa11.38□□□□□ -0.59
SNCA-201ENST00000336904 NOB1Q9ULX3 412 aaKnown RBP11.38□□□□□ -0.59
SNCA-201ENST00000336904 NSD2O96028 1365 aa11.37□□□□□ -0.59
SNCA-201ENST00000336904 MS4A1P11836 297 aa11.37□□□□□ -0.59
SNCA-201ENST00000336904 TRIM27P14373 513 aa11.37□□□□□ -0.59
SNCA-201ENST00000336904 TSPYL6Q8N831 410 aa11.37□□□□□ -0.59
SNCA-201ENST00000336904 COL3A1P02461 1466 aaPredicted RBP11.37□□□□□ -0.59
SNCA-201ENST00000336904 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 CPS1P31327 1500 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 USP32Q8NFA0 1604 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
SNCA-201ENST00000336904 COG3Q96JB2 828 aa11.35□□□□□ -0.59
SNCA-201ENST00000336904 FAM161AQ3B820 660 aa11.35□□□□□ -0.59
SNCA-201ENST00000336904 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
SNCA-201ENST00000336904 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
SNCA-201ENST00000336904 DZIP1LQ8IYY4 767 aaKnown RBP11.35□□□□□ -0.59
SNCA-201ENST00000336904 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
SNCA-201ENST00000336904 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
SNCA-201ENST00000336904 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
SNCA-201ENST00000336904 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
SNCA-201ENST00000336904 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
SNCA-201ENST00000336904 MAP2P11137 1827 aaKnown RBP11.34□□□□□ -0.59
SNCA-201ENST00000336904 ACEP12821 1306 aa11.34□□□□□ -0.59
SNCA-201ENST00000336904 NEFMP07197 916 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 MIS18AQ9NYP9 233 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 AGLP35573 1532 aa11.33□□□□□ -0.6
SNCA-201ENST00000336904 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
SNCA-201ENST00000336904 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNCA-201ENST00000336904 NINLQ9Y2I6 1382 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 SULT6B1Q6IMI4 303 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
SNCA-201ENST00000336904 IL13P35225 146 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 MCM10Q7L590 875 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
SNCA-201ENST00000336904 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
SNCA-201ENST00000336904 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
SNCA-201ENST00000336904 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
SNCA-201ENST00000336904 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
SNCA-201ENST00000336904 FOXO3O43524 673 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
SNCA-201ENST00000336904 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 FCHSD2O94868 740 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 PPP6R1Q9UPN7 881 aa11.3□□□□□ -0.6
SNCA-201ENST00000336904 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
SNCA-201ENST00000336904 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
SNCA-201ENST00000336904 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
SNCA-201ENST00000336904 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
SNCA-201ENST00000336904 NGDNQ8NEJ9 315 aaKnown RBP11.29□□□□□ -0.6
SNCA-201ENST00000336904 PNPLA6Q8IY17 1366 aa11.29□□□□□ -0.6
SNCA-201ENST00000336904 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
SNCA-201ENST00000336904 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
SNCA-201ENST00000336904 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms