RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
LCK-202ENST00000336890 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
LCK-202ENST00000336890 MED14O60244 1454 aa20.85■□□□□ 0.93
LCK-202ENST00000336890 VGFO15240 615 aaPredicted RBP20.84■□□□□ 0.93
LCK-202ENST00000336890 PNNQ9H307 717 aaKnown RBP20.84■□□□□ 0.93
LCK-202ENST00000336890 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
LCK-202ENST00000336890 NEXMIFQ5QGS0 1516 aa20.82■□□□□ 0.92
LCK-202ENST00000336890 ZFYVE9O95405 1425 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 KIF16BQ96L93 1317 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 BCL2L13Q9BXK5 485 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 POGKQ9P215 609 aa20.81■□□□□ 0.92
LCK-202ENST00000336890 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
LCK-202ENST00000336890 CHMP5Q9NZZ3 219 aa20.8■□□□□ 0.92
LCK-202ENST00000336890 CLTCQ00610 1675 aaKnown RBP20.79■□□□□ 0.92
LCK-202ENST00000336890 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
LCK-202ENST00000336890 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
LCK-202ENST00000336890 ATAD2Q6PL18 1390 aa20.79■□□□□ 0.92
LCK-202ENST00000336890 IDI1Q13907 227 aa20.78■□□□□ 0.92
LCK-202ENST00000336890 COL3A1P02461 1466 aaPredicted RBP20.78■□□□□ 0.92
LCK-202ENST00000336890 SPATA31D1Q6ZQQ2 1576 aa20.78■□□□□ 0.92
LCK-202ENST00000336890 ATF7IPQ6VMQ6 1270 aa20.78■□□□□ 0.92
LCK-202ENST00000336890 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.92
LCK-202ENST00000336890 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.91
LCK-202ENST00000336890 SMC5Q8IY18 1101 aa20.77■□□□□ 0.91
LCK-202ENST00000336890 ZNF428Q96B54 188 aa20.77■□□□□ 0.91
LCK-202ENST00000336890 TNNQ9UQP3 1299 aa20.77■□□□□ 0.91
LCK-202ENST00000336890 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
LCK-202ENST00000336890 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
LCK-202ENST00000336890 TRIM27P14373 513 aa20.75■□□□□ 0.91
LCK-202ENST00000336890 HSCBQ8IWL3 235 aa20.75■□□□□ 0.91
LCK-202ENST00000336890 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
LCK-202ENST00000336890 TERF2IPQ9NYB0 399 aa20.75■□□□□ 0.91
LCK-202ENST00000336890 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
LCK-202ENST00000336890 MCM4P33991 863 aa20.74■□□□□ 0.91
LCK-202ENST00000336890 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
LCK-202ENST00000336890 EXOSC9Q06265 439 aaKnown RBP20.74■□□□□ 0.91
LCK-202ENST00000336890 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
LCK-202ENST00000336890 ITPRIPQ8IWB1 547 aa20.74■□□□□ 0.91
LCK-202ENST00000336890 CDC42BPGQ6DT37 1551 aa20.74■□□□□ 0.91
LCK-202ENST00000336890 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
LCK-202ENST00000336890 DDX11L8A8MPP1 907 aa20.73■□□□□ 0.91
LCK-202ENST00000336890 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
LCK-202ENST00000336890 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
LCK-202ENST00000336890 PTMSP20962 102 aa20.71■□□□□ 0.91
LCK-202ENST00000336890 MFAP1P55081 439 aaKnown RBP20.71■□□□□ 0.91
LCK-202ENST00000336890 SSH1Q8WYL5 1049 aa20.71■□□□□ 0.91
LCK-202ENST00000336890 KIF20BQ96Q89 1820 aa20.7■□□□□ 0.9
LCK-202ENST00000336890 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
LCK-202ENST00000336890 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
LCK-202ENST00000336890 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
LCK-202ENST00000336890 TRIM35Q9UPQ4 493 aa20.7■□□□□ 0.9
LCK-202ENST00000336890 MLECQ14165 292 aa20.69■□□□□ 0.9
LCK-202ENST00000336890 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
LCK-202ENST00000336890 FSD2A1L4K1 749 aa20.69■□□□□ 0.9
LCK-202ENST00000336890 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
LCK-202ENST00000336890 SNX21Q969T3 373 aa20.69■□□□□ 0.9
LCK-202ENST00000336890 ZBTB40Q9NUA8 1239 aa20.69■□□□□ 0.9
LCK-202ENST00000336890 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
LCK-202ENST00000336890 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
LCK-202ENST00000336890 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
LCK-202ENST00000336890 CIZ1Q9ULV3 898 aaPredicted RBP20.68■□□□□ 0.9
LCK-202ENST00000336890 PNPLA6Q8IY17 1366 aa20.67■□□□□ 0.9
LCK-202ENST00000336890 NOB1Q9ULX3 412 aaKnown RBP20.67■□□□□ 0.9
LCK-202ENST00000336890 MYO5BQ9ULV0 1848 aa20.67■□□□□ 0.9
LCK-202ENST00000336890 DIAPH1O60610 1272 aaKnown RBP20.66■□□□□ 0.9
LCK-202ENST00000336890 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
LCK-202ENST00000336890 NUCB1Q02818 461 aa20.66■□□□□ 0.9
LCK-202ENST00000336890 CALD1Q05682 793 aaKnown RBP20.66■□□□□ 0.9
LCK-202ENST00000336890 PTPRMP28827 1452 aa20.66■□□□□ 0.9
LCK-202ENST00000336890 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
LCK-202ENST00000336890 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
LCK-202ENST00000336890 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
LCK-202ENST00000336890 MRE11P49959 708 aa20.65■□□□□ 0.9
LCK-202ENST00000336890 RIPK4P57078 832 aa20.65■□□□□ 0.9
LCK-202ENST00000336890 FCHSD2O94868 740 aa20.64■□□□□ 0.89
LCK-202ENST00000336890 TMEM57Q8N5G2 664 aa20.64■□□□□ 0.89
LCK-202ENST00000336890 TRAK2O60296 914 aa20.63■□□□□ 0.89
LCK-202ENST00000336890 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
LCK-202ENST00000336890 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
LCK-202ENST00000336890 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
LCK-202ENST00000336890 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
LCK-202ENST00000336890 ARHGAP45Q92619 1136 aa20.62■□□□□ 0.89
LCK-202ENST00000336890 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
LCK-202ENST00000336890 CD163L1Q9NR16 1453 aa20.61■□□□□ 0.89
LCK-202ENST00000336890 FYB1O15117 783 aa20.61■□□□□ 0.89
LCK-202ENST00000336890 CHD1LQ86WJ1 897 aa20.61■□□□□ 0.89
LCK-202ENST00000336890 GBP4Q96PP9 640 aa20.61■□□□□ 0.89
LCK-202ENST00000336890 LRRC7Q96NW7 1537 aa20.61■□□□□ 0.89
LCK-202ENST00000336890 PRKCSHP14314 528 aaPredicted RBP20.6■□□□□ 0.89
LCK-202ENST00000336890 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
LCK-202ENST00000336890 FAM135BQ49AJ0 1406 aa20.6■□□□□ 0.89
LCK-202ENST00000336890 XRCC6P12956 609 aaKnown RBP eCLIP20.6■□□□□ 0.89
LCK-202ENST00000336890 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
LCK-202ENST00000336890 YTHDC2Q9H6S0 1430 aaKnown RBP20.59■□□□□ 0.89
LCK-202ENST00000336890 PTCH1Q13635 1447 aa20.59■□□□□ 0.89
LCK-202ENST00000336890 DDIT3P35638 169 aa20.58■□□□□ 0.89
LCK-202ENST00000336890 ATP7BP35670 1465 aa20.57■□□□□ 0.88
LCK-202ENST00000336890 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms