RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 DNAI2Q9GZS0 605 aa8.99□□□□□ -0.97
EPHA3-201ENST00000336596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.99□□□□□ -0.97
EPHA3-201ENST00000336596 IFIT2P09913 472 aaKnown RBP8.99□□□□□ -0.97
EPHA3-201ENST00000336596 MYO5CQ9NQX4 1742 aa8.99□□□□□ -0.97
EPHA3-201ENST00000336596 RIPK4P57078 832 aa8.99□□□□□ -0.97
EPHA3-201ENST00000336596 BRMS1Q9HCU9 246 aa8.99□□□□□ -0.97
EPHA3-201ENST00000336596 ZMYM3Q14202 1370 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 C14orf93Q9H972 538 aaKnown RBP8.98□□□□□ -0.97
EPHA3-201ENST00000336596 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
EPHA3-201ENST00000336596 CFAP74Q9C0B2 1584 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
EPHA3-201ENST00000336596 CCDC30Q5VVM6 783 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 ERC1Q8IUD2 1116 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 RBM42Q9BTD8 480 aaKnown RBP8.98□□□□□ -0.97
EPHA3-201ENST00000336596 XPCQ01831 940 aaPredicted RBP8.98□□□□□ -0.97
EPHA3-201ENST00000336596 MAGI3Q5TCQ9 1506 aa8.98□□□□□ -0.97
EPHA3-201ENST00000336596 ERCC6L2Q5T890 1561 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
EPHA3-201ENST00000336596 XBP1P17861 261 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 C16orf71Q8IYS4 520 aaPredicted RBP8.97□□□□□ -0.97
EPHA3-201ENST00000336596 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 STARD3NLO95772 234 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 DIAPH3Q9NSV4 1193 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 ZCCHC11Q5TAX3 1644 aaKnown RBP8.97□□□□□ -0.97
EPHA3-201ENST00000336596 ATP6V1DQ9Y5K8 247 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 PPP2R1AP30153 589 aa8.97□□□□□ -0.97
EPHA3-201ENST00000336596 ST18O60284 1047 aa8.96□□□□□ -0.97
EPHA3-201ENST00000336596 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.97
EPHA3-201ENST00000336596 ZKSCAN2Q63HK3 967 aa8.96□□□□□ -0.97
EPHA3-201ENST00000336596 CLUAP1Q96AJ1 413 aa8.96□□□□□ -0.97
EPHA3-201ENST00000336596 RIMS2Q9UQ26 1411 aa8.96□□□□□ -0.98
EPHA3-201ENST00000336596 HIP1O00291 1037 aa8.96□□□□□ -0.98
EPHA3-201ENST00000336596 EIF2S2P20042 333 aaKnown RBP8.96□□□□□ -0.98
EPHA3-201ENST00000336596 BRD4O60885 1362 aaPredicted RBP8.96□□□□□ -0.98
EPHA3-201ENST00000336596 POLD1P28340 1107 aa8.96□□□□□ -0.98
EPHA3-201ENST00000336596 SART3Q15020 963 aaKnown RBP8.96□□□□□ -0.98
EPHA3-201ENST00000336596 HSP90AB3PQ58FF7 597 aa8.96□□□□□ -0.98
EPHA3-201ENST00000336596 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
EPHA3-201ENST00000336596 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
EPHA3-201ENST00000336596 GLIPR1L2Q4G1C9 344 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 TEX13AQ9BXU3 409 aaPredicted RBP8.95□□□□□ -0.98
EPHA3-201ENST00000336596 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
EPHA3-201ENST00000336596 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 UBAP1LF5GYI3 381 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 APBB1O00213 710 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 ZPR1O75312 459 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
EPHA3-201ENST00000336596 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 TSPOAP1O95153 1857 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.95□□□□□ -0.98
EPHA3-201ENST00000336596 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
EPHA3-201ENST00000336596 RAD21O60216 631 aa8.94□□□□□ -0.98
EPHA3-201ENST00000336596 PHF14O94880 888 aa8.94□□□□□ -0.98
EPHA3-201ENST00000336596 TRIM21P19474 475 aaKnown RBP8.94□□□□□ -0.98
EPHA3-201ENST00000336596 NOC3LQ8WTT2 800 aaKnown RBP8.94□□□□□ -0.98
EPHA3-201ENST00000336596 NCBP3Q53F19 620 aaKnown RBP8.94□□□□□ -0.98
EPHA3-201ENST00000336596 ZBED9Q6R2W3 1325 aa8.94□□□□□ -0.98
EPHA3-201ENST00000336596 NSD3Q9BZ95 1437 aa8.94□□□□□ -0.98
EPHA3-201ENST00000336596 TSR1Q2NL82 804 aaKnown RBP8.94□□□□□ -0.98
EPHA3-201ENST00000336596 DDX19BQ9UMR2 479 aa8.94□□□□□ -0.98
EPHA3-201ENST00000336596 AMOTQ4VCS5 1084 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 FAM184AQ8NB25 1140 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 ANKRD20A12PQ8NF67 263 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.93□□□□□ -0.98
EPHA3-201ENST00000336596 TPM1P09493 284 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 SAFBQ15424 915 aaKnown RBP eCLIP8.93□□□□□ -0.98
EPHA3-201ENST00000336596 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 FOXO3O43524 673 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 HSPA2P54652 639 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 SF3A1Q15459 793 aaKnown RBP8.93□□□□□ -0.98
EPHA3-201ENST00000336596 ZNF287Q9HBT7 754 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 ADAMTS8Q9UP79 889 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 H3BQV1 296 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 APPP05067 770 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
EPHA3-201ENST00000336596 GNAI3P08754 354 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 PRKAR2BP31323 418 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 DRC7Q8IY82 874 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 DNTTIP2Q5QJE6 756 aaKnown RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 MPHOSPH6Q99547 160 aaKnown RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 TTC37Q6PGP7 1564 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 ARHGEF5Q12774 1597 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
EPHA3-201ENST00000336596 TMOD3Q9NYL9 352 aa8.92□□□□□ -0.98
EPHA3-201ENST00000336596 TPM3P06753 285 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 CCDC158Q5M9N0 1113 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
EPHA3-201ENST00000336596 UHRF1BP1Q6BDS2 1440 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 YEATS2Q9ULM3 1422 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 MAST1Q9Y2H9 1570 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 SULT6B1Q6IMI4 303 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 CDCA7Q9BWT1 371 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms