RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.69■■□□□ 1.06
TMEM39B-201ENST00000336294 NUDT16Q96DE0 195 aaKnown RBP21.69■■□□□ 1.06
TMEM39B-201ENST00000336294 FER1L4A9Z1Z3 1794 aa21.68■■□□□ 1.06
TMEM39B-201ENST00000336294 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
TMEM39B-201ENST00000336294 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
TMEM39B-201ENST00000336294 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
TMEM39B-201ENST00000336294 MSH5O43196 834 aa21.67■■□□□ 1.06
TMEM39B-201ENST00000336294 BCAR3O75815 825 aa21.67■■□□□ 1.06
TMEM39B-201ENST00000336294 CCDC61Q9Y6R9 512 aa21.67■■□□□ 1.06
TMEM39B-201ENST00000336294 LTKP29376 864 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 PNNQ9H307 717 aaKnown RBP21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 ROBO2Q9HCK4 1378 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 MAPK8IP3Q9UPT6 1336 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 SLIT1O75093 1534 aa21.66■■□□□ 1.06
TMEM39B-201ENST00000336294 MYH16Q9H6N6 1097 aa21.65■■□□□ 1.06
TMEM39B-201ENST00000336294 ARHGAP23Q9P227 1491 aa21.65■■□□□ 1.06
TMEM39B-201ENST00000336294 ITSN1Q15811 1721 aa21.64■■□□□ 1.05
TMEM39B-201ENST00000336294 AKAP12Q02952 1782 aa21.64■■□□□ 1.05
TMEM39B-201ENST00000336294 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
TMEM39B-201ENST00000336294 TMPOP42166 694 aaKnown RBP21.62■■□□□ 1.05
TMEM39B-201ENST00000336294 ZNF692Q9BU19 519 aaPredicted RBP21.62■■□□□ 1.05
TMEM39B-201ENST00000336294 POLKQ9UBT6 870 aa21.62■■□□□ 1.05
TMEM39B-201ENST00000336294 MS4A1P11836 297 aa21.61■■□□□ 1.05
TMEM39B-201ENST00000336294 CENPQQ7L2Z9 268 aaPredicted RBP21.61■■□□□ 1.05
TMEM39B-201ENST00000336294 KDM2BQ8NHM5 1336 aa21.61■■□□□ 1.05
TMEM39B-201ENST00000336294 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
TMEM39B-201ENST00000336294 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
TMEM39B-201ENST00000336294 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
TMEM39B-201ENST00000336294 AATKQ6ZMQ8 1374 aa21.6■■□□□ 1.05
TMEM39B-201ENST00000336294 NME9Q86XW9 330 aa21.59■■□□□ 1.05
TMEM39B-201ENST00000336294 PRR36Q9H6K5 1346 aa21.59■■□□□ 1.05
TMEM39B-201ENST00000336294 FCHSD2O94868 740 aa21.59■■□□□ 1.05
TMEM39B-201ENST00000336294 RARSP54136 660 aaKnown RBP21.59■■□□□ 1.05
TMEM39B-201ENST00000336294 MAP2P11137 1827 aaKnown RBP21.58■■□□□ 1.05
TMEM39B-201ENST00000336294 COG3Q96JB2 828 aa21.58■■□□□ 1.05
TMEM39B-201ENST00000336294 TOPAZ1Q8N9V7 1692 aa21.58■■□□□ 1.05
TMEM39B-201ENST00000336294 NCKAP5LQ9HCH0 1330 aa21.58■■□□□ 1.05
TMEM39B-201ENST00000336294 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.04
TMEM39B-201ENST00000336294 DIP2AQ14689 1571 aa21.58■■□□□ 1.04
TMEM39B-201ENST00000336294 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 PTPRUQ92729 1446 aa21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 TBX22Q9Y458 520 aa21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 IL16Q14005 1332 aa21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
TMEM39B-201ENST00000336294 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
TMEM39B-201ENST00000336294 TRIM35Q9UPQ4 493 aa21.56■■□□□ 1.04
TMEM39B-201ENST00000336294 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
TMEM39B-201ENST00000336294 PTCH1Q13635 1447 aa21.54■■□□□ 1.04
TMEM39B-201ENST00000336294 NEFMP07197 916 aa21.54■■□□□ 1.04
TMEM39B-201ENST00000336294 RIPK4P57078 832 aa21.54■■□□□ 1.04
TMEM39B-201ENST00000336294 FBLN1P23142 703 aa21.53■■□□□ 1.04
TMEM39B-201ENST00000336294 RSPH6AQ9H0K4 717 aa21.53■■□□□ 1.04
TMEM39B-201ENST00000336294 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
TMEM39B-201ENST00000336294 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
TMEM39B-201ENST00000336294 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
TMEM39B-201ENST00000336294 PLEKHG3A1L390 1219 aa21.52■■□□□ 1.04
TMEM39B-201ENST00000336294 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
TMEM39B-201ENST00000336294 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
TMEM39B-201ENST00000336294 PRKAR2BP31323 418 aa21.5■■□□□ 1.03
TMEM39B-201ENST00000336294 PDE4AP27815 886 aa21.5■■□□□ 1.03
TMEM39B-201ENST00000336294 IL13P35225 146 aa21.5■■□□□ 1.03
TMEM39B-201ENST00000336294 AAMPQ13685 434 aa21.5■■□□□ 1.03
TMEM39B-201ENST00000336294 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
TMEM39B-201ENST00000336294 ACEP12821 1306 aa21.49■■□□□ 1.03
TMEM39B-201ENST00000336294 TTC21BQ7Z4L5 1316 aa21.49■■□□□ 1.03
TMEM39B-201ENST00000336294 TSR2Q969E8 191 aaKnown RBP21.49■■□□□ 1.03
TMEM39B-201ENST00000336294 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
TMEM39B-201ENST00000336294 COG6Q9Y2V7 657 aa21.48■■□□□ 1.03
TMEM39B-201ENST00000336294 USP6P35125 1406 aa21.48■■□□□ 1.03
TMEM39B-201ENST00000336294 CLUAP1Q96AJ1 413 aa21.48■■□□□ 1.03
TMEM39B-201ENST00000336294 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
TMEM39B-201ENST00000336294 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
TMEM39B-201ENST00000336294 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
TMEM39B-201ENST00000336294 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
TMEM39B-201ENST00000336294 NFE2L2Q16236 605 aa21.45■■□□□ 1.03
TMEM39B-201ENST00000336294 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.03
TMEM39B-201ENST00000336294 OVOS2A0A0J9YW53 1432 aa21.45■■□□□ 1.02
TMEM39B-201ENST00000336294 OVOS2Q6IE36 1432 aa21.45■■□□□ 1.02
TMEM39B-201ENST00000336294 HMOX1P09601 288 aa21.45■■□□□ 1.02
TMEM39B-201ENST00000336294 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
TMEM39B-201ENST00000336294 NUTM2FA1L443 756 aa21.44■■□□□ 1.02
TMEM39B-201ENST00000336294 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 PIK3R4Q99570 1358 aa21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 SKAP1Q86WV1 359 aa21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 RIMS1Q86UR5 1692 aaKnown RBP21.43■■□□□ 1.02
TMEM39B-201ENST00000336294 NALCNQ8IZF0 1738 aa21.42■■□□□ 1.02
TMEM39B-201ENST00000336294 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
TMEM39B-201ENST00000336294 SMC4Q9NTJ3 1288 aa21.41■■□□□ 1.02
TMEM39B-201ENST00000336294 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
TMEM39B-201ENST00000336294 RLBP1P12271 317 aa21.41■■□□□ 1.02
TMEM39B-201ENST00000336294 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
TMEM39B-201ENST00000336294 KDM4FA0A1W2PPD8 638 aa21.39■■□□□ 1.02
TMEM39B-201ENST00000336294 TNNQ9UQP3 1299 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms