RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 ALS2Q96Q42 1657 aa20.81■□□□□ 0.92
CMC1-201ENST00000334841 PER1O15534 1290 aaPredicted RBP20.81■□□□□ 0.92
CMC1-201ENST00000334841 PSME1Q06323 249 aa20.81■□□□□ 0.92
CMC1-201ENST00000334841 BRD4O60885 1362 aaPredicted RBP20.81■□□□□ 0.92
CMC1-201ENST00000334841 PHLPP1O60346 1717 aa20.81■□□□□ 0.92
CMC1-201ENST00000334841 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
CMC1-201ENST00000334841 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
CMC1-201ENST00000334841 TTC21BQ7Z4L5 1316 aa20.79■□□□□ 0.92
CMC1-201ENST00000334841 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
CMC1-201ENST00000334841 SBNO1A3KN83 1393 aa20.78■□□□□ 0.92
CMC1-201ENST00000334841 USP54Q70EL1 1684 aa20.77■□□□□ 0.92
CMC1-201ENST00000334841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.927e-7■■□□□ 12.2
CMC1-201ENST00000334841 MARF1Q9Y4F3 1742 aaKnown RBP20.77■□□□□ 0.92
CMC1-201ENST00000334841 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.91
CMC1-201ENST00000334841 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
CMC1-201ENST00000334841 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
CMC1-201ENST00000334841 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
CMC1-201ENST00000334841 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
CMC1-201ENST00000334841 OVOS2A0A0J9YW53 1432 aa20.74■□□□□ 0.91
CMC1-201ENST00000334841 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
CMC1-201ENST00000334841 OVOS2Q6IE36 1432 aa20.74■□□□□ 0.91
CMC1-201ENST00000334841 NME9Q86XW9 330 aa20.74■□□□□ 0.91
CMC1-201ENST00000334841 MED1Q15648 1581 aaPredicted RBP20.73■□□□□ 0.91
CMC1-201ENST00000334841 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
CMC1-201ENST00000334841 NSD2O96028 1365 aa20.72■□□□□ 0.91
CMC1-201ENST00000334841 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
CMC1-201ENST00000334841 FYB1O15117 783 aa20.72■□□□□ 0.91
CMC1-201ENST00000334841 CRYBG1Q9Y4K1 1723 aa20.72■□□□□ 0.91
CMC1-201ENST00000334841 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
CMC1-201ENST00000334841 USP31Q70CQ4 1352 aa20.71■□□□□ 0.91
CMC1-201ENST00000334841 GGNBP2Q9H3C7 697 aa20.7■□□□□ 0.9
CMC1-201ENST00000334841 ARHGEF10O15013 1369 aa20.7■□□□□ 0.9
CMC1-201ENST00000334841 ABCA3Q99758 1704 aa20.7■□□□□ 0.9
CMC1-201ENST00000334841 COL22A1Q8NFW1 1626 aaPredicted RBP20.69■□□□□ 0.9
CMC1-201ENST00000334841 PHRF1Q9P1Y6 1649 aaKnown RBP20.69■□□□□ 0.9
CMC1-201ENST00000334841 ABTB2Q8N961 1025 aa20.69■□□□□ 0.9
CMC1-201ENST00000334841 SLIT3O75094 1523 aa20.68■□□□□ 0.9
CMC1-201ENST00000334841 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
CMC1-201ENST00000334841 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
CMC1-201ENST00000334841 PNPLA6Q8IY17 1366 aa20.67■□□□□ 0.9
CMC1-201ENST00000334841 SHPRHQ149N8 1683 aa20.67■□□□□ 0.9
CMC1-201ENST00000334841 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
CMC1-201ENST00000334841 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
CMC1-201ENST00000334841 LRRC59Q96AG4 307 aaKnown RBP20.66■□□□□ 0.9
CMC1-201ENST00000334841 USP19O94966 1318 aa20.66■□□□□ 0.9
CMC1-201ENST00000334841 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
CMC1-201ENST00000334841 HSPA1LP34931 641 aa20.65■□□□□ 0.9
CMC1-201ENST00000334841 NLRP6P59044 892 aa20.65■□□□□ 0.9
CMC1-201ENST00000334841 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
CMC1-201ENST00000334841 FBXO41Q8TF61 875 aa20.64■□□□□ 0.89
CMC1-201ENST00000334841 COG3Q96JB2 828 aa20.64■□□□□ 0.89
CMC1-201ENST00000334841 NFAT5O94916 1531 aa20.63■□□□□ 0.89
CMC1-201ENST00000334841 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
CMC1-201ENST00000334841 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
CMC1-201ENST00000334841 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
CMC1-201ENST00000334841 JCADQ9P266 1359 aa20.59■□□□□ 0.89
CMC1-201ENST00000334841 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
CMC1-201ENST00000334841 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
CMC1-201ENST00000334841 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
CMC1-201ENST00000334841 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
CMC1-201ENST00000334841 SOX12O15370 315 aa20.56■□□□□ 0.88
CMC1-201ENST00000334841 ANP32CO43423 234 aa20.56■□□□□ 0.88
CMC1-201ENST00000334841 FBLN1P23142 703 aa20.56■□□□□ 0.88
CMC1-201ENST00000334841 RALBP1Q15311 655 aa20.56■□□□□ 0.88
CMC1-201ENST00000334841 SMG6Q86US8 1419 aaKnown RBP20.55■□□□□ 0.88
CMC1-201ENST00000334841 LTN1O94822 1766 aa20.55■□□□□ 0.88
CMC1-201ENST00000334841 GCP02774 474 aa20.55■□□□□ 0.88
CMC1-201ENST00000334841 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
CMC1-201ENST00000334841 KCNH5Q8NCM2 988 aa20.53■□□□□ 0.88
CMC1-201ENST00000334841 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
CMC1-201ENST00000334841 LRP6O75581 1613 aa20.52■□□□□ 0.88
CMC1-201ENST00000334841 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.87
CMC1-201ENST00000334841 RRS1Q15050 365 aaKnown RBP20.51■□□□□ 0.87
CMC1-201ENST00000334841 MAP3K19Q56UN5 1328 aa20.51■□□□□ 0.87
CMC1-201ENST00000334841 CPDO75976 1380 aa20.5■□□□□ 0.87
CMC1-201ENST00000334841 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
CMC1-201ENST00000334841 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
CMC1-201ENST00000334841 CDK12Q9NYV4 1490 aaPredicted RBP20.5■□□□□ 0.87
CMC1-201ENST00000334841 KIAA0232Q92628 1395 aa20.49■□□□□ 0.87
CMC1-201ENST00000334841 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
CMC1-201ENST00000334841 POLKQ9UBT6 870 aa20.49■□□□□ 0.87
CMC1-201ENST00000334841 SPATA31A6Q5VVP1 1343 aa20.49■□□□□ 0.87
CMC1-201ENST00000334841 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
CMC1-201ENST00000334841 ABCC6O95255 1503 aa20.48■□□□□ 0.87
CMC1-201ENST00000334841 ZC3H6P61129 1189 aaKnown RBP20.48■□□□□ 0.87
CMC1-201ENST00000334841 ARHGEF25Q86VW2 580 aa20.48■□□□□ 0.87
CMC1-201ENST00000334841 COL18A1P39060 1754 aa20.48■□□□□ 0.87
CMC1-201ENST00000334841 RTL1A6NKG5 1358 aa20.47■□□□□ 0.87
CMC1-201ENST00000334841 COL3A1P02461 1466 aaPredicted RBP20.46■□□□□ 0.87
CMC1-201ENST00000334841 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
CMC1-201ENST00000334841 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
CMC1-201ENST00000334841 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
CMC1-201ENST00000334841 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
CMC1-201ENST00000334841 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
CMC1-201ENST00000334841 MTHFSP49914 203 aa20.45■□□□□ 0.86
CMC1-201ENST00000334841 MIER1Q8N108 512 aa20.45■□□□□ 0.86
CMC1-201ENST00000334841 FLT4P35916 1363 aa20.45■□□□□ 0.86
CMC1-201ENST00000334841 PLCH1Q4KWH8 1693 aa20.45■□□□□ 0.86
CMC1-201ENST00000334841 ZBTB7CA1YPR0 619 aa20.44■□□□□ 0.86
CMC1-201ENST00000334841 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms