RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 RGS12O14924 1447 aa16.14■□□□□ 0.17
C9orf85-201ENST00000334731 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
C9orf85-201ENST00000334731 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
C9orf85-201ENST00000334731 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
C9orf85-201ENST00000334731 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
C9orf85-201ENST00000334731 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
C9orf85-201ENST00000334731 ATP7BP35670 1465 aa16.12■□□□□ 0.17
C9orf85-201ENST00000334731 CCDC61Q9Y6R9 512 aa16.12■□□□□ 0.17
C9orf85-201ENST00000334731 SLIT2O94813 1529 aa16.12■□□□□ 0.17
C9orf85-201ENST00000334731 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
C9orf85-201ENST00000334731 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
C9orf85-201ENST00000334731 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
C9orf85-201ENST00000334731 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
C9orf85-201ENST00000334731 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
C9orf85-201ENST00000334731 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
C9orf85-201ENST00000334731 NBPF8Q3BBV2 869 aa16.09■□□□□ 0.17
C9orf85-201ENST00000334731 ACEP12821 1306 aa16.09■□□□□ 0.17
C9orf85-201ENST00000334731 SRPK2P78362 688 aaKnown RBP16.08■□□□□ 0.16
C9orf85-201ENST00000334731 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
C9orf85-201ENST00000334731 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.16
C9orf85-201ENST00000334731 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
C9orf85-201ENST00000334731 MARF1Q9Y4F3 1742 aaKnown RBP16.07■□□□□ 0.16
C9orf85-201ENST00000334731 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
C9orf85-201ENST00000334731 VPS72Q15906 364 aa16.06■□□□□ 0.16
C9orf85-201ENST00000334731 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
C9orf85-201ENST00000334731 ALS2Q96Q42 1657 aa16.04■□□□□ 0.16
C9orf85-201ENST00000334731 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
C9orf85-201ENST00000334731 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
C9orf85-201ENST00000334731 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
C9orf85-201ENST00000334731 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.16
C9orf85-201ENST00000334731 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
C9orf85-201ENST00000334731 ABCB7O75027 752 aa16.02■□□□□ 0.16
C9orf85-201ENST00000334731 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.16
C9orf85-201ENST00000334731 CABP1Q9NZU7 370 aa16.02■□□□□ 0.16
C9orf85-201ENST00000334731 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
C9orf85-201ENST00000334731 ONECUT3O60422 494 aaPredicted RBP16.01■□□□□ 0.15
C9orf85-201ENST00000334731 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
C9orf85-201ENST00000334731 GLI3P10071 1580 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 ITSN1Q15811 1721 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 ABCA3Q99758 1704 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
C9orf85-201ENST00000334731 SEPT12Q8IYM1 358 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 ABTB2Q8N961 1025 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 PRDM11Q9NQV5 511 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 TONSLQ96HA7 1378 aa16■□□□□ 0.15
C9orf85-201ENST00000334731 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
C9orf85-201ENST00000334731 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
C9orf85-201ENST00000334731 CARD11Q9BXL7 1154 aa15.98■□□□□ 0.15
C9orf85-201ENST00000334731 KIAA0232Q92628 1395 aa15.98■□□□□ 0.15
C9orf85-201ENST00000334731 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
C9orf85-201ENST00000334731 QRICH2Q9H0J4 1663 aa15.97■□□□□ 0.15
C9orf85-201ENST00000334731 BRD4O60885 1362 aaPredicted RBP15.97■□□□□ 0.15
C9orf85-201ENST00000334731 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
C9orf85-201ENST00000334731 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
C9orf85-201ENST00000334731 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
C9orf85-201ENST00000334731 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
C9orf85-201ENST00000334731 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
C9orf85-201ENST00000334731 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
C9orf85-201ENST00000334731 USP19O94966 1318 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 SPATA31A5Q5VU36 1347 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 SPATA31A7Q8IWB4 1347 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 GCP02774 474 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 USP6P35125 1406 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
C9orf85-201ENST00000334731 KRT27Q7Z3Y8 459 aa15.93■□□□□ 0.14
C9orf85-201ENST00000334731 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
C9orf85-201ENST00000334731 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
C9orf85-201ENST00000334731 NLRP6P59044 892 aa15.92■□□□□ 0.14
C9orf85-201ENST00000334731 CPDO75976 1380 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 A0A0G2JS52 829 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 ZBTB22O15209 634 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 MYT1Q01538 1121 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 NRAPQ86VF7 1730 aa15.91■□□□□ 0.14
C9orf85-201ENST00000334731 EVA1CP58658 441 aa15.9■□□□□ 0.14
C9orf85-201ENST00000334731 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
C9orf85-201ENST00000334731 TTC21BQ7Z4L5 1316 aa15.9■□□□□ 0.14
C9orf85-201ENST00000334731 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
C9orf85-201ENST00000334731 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
C9orf85-201ENST00000334731 BLMP54132 1417 aaPredicted RBP15.87■□□□□ 0.13
C9orf85-201ENST00000334731 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
C9orf85-201ENST00000334731 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
C9orf85-201ENST00000334731 CAMTA1Q9Y6Y1 1673 aa15.86■□□□□ 0.13
C9orf85-201ENST00000334731 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
C9orf85-201ENST00000334731 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
C9orf85-201ENST00000334731 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
C9orf85-201ENST00000334731 ST20-MTHFSA0A0A6YYL1 179 aa15.85■□□□□ 0.13
C9orf85-201ENST00000334731 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
C9orf85-201ENST00000334731 PUS7Q96PZ0 661 aaKnown RBP15.85■□□□□ 0.13
C9orf85-201ENST00000334731 TESK2Q96S53 571 aa15.85■□□□□ 0.13
C9orf85-201ENST00000334731 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
C9orf85-201ENST00000334731 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 BARGINQ6ZT62 677 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 EP400Q96L91 3159 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 SLIT3O75094 1523 aa15.84■□□□□ 0.13
C9orf85-201ENST00000334731 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
C9orf85-201ENST00000334731 DEFB132Q7Z7B7 95 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms