RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
CHGA-202ENST00000334654 NSD3Q9BZ95 1437 aa24.11■■□□□ 1.45
CHGA-202ENST00000334654 TTC21BQ7Z4L5 1316 aa24.11■■□□□ 1.45
CHGA-202ENST00000334654 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
CHGA-202ENST00000334654 COL16A1Q07092 1604 aaPredicted RBP24.09■■□□□ 1.45
CHGA-202ENST00000334654 SBNO1A3KN83 1393 aa24.09■■□□□ 1.45
CHGA-202ENST00000334654 ALS2Q96Q42 1657 aa24.08■■□□□ 1.45
CHGA-202ENST00000334654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
CHGA-202ENST00000334654 SPATA31A3Q5VYP0 1347 aa24.06■■□□□ 1.44
CHGA-202ENST00000334654 TTC21AQ8NDW8 1320 aa24.06■■□□□ 1.44
CHGA-202ENST00000334654 PIK3C2AO00443 1686 aa24.05■■□□□ 1.44
CHGA-202ENST00000334654 FBXO41Q8TF61 875 aa24.05■■□□□ 1.44
CHGA-202ENST00000334654 FYB1O15117 783 aa24.04■■□□□ 1.44
CHGA-202ENST00000334654 PAK3O75914 559 aaPredicted RBP24.04■■□□□ 1.44
CHGA-202ENST00000334654 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
CHGA-202ENST00000334654 TNS3Q68CZ2 1445 aa24.04■■□□□ 1.44
CHGA-202ENST00000334654 NME9Q86XW9 330 aa24.03■■□□□ 1.44
CHGA-202ENST00000334654 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
CHGA-202ENST00000334654 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
CHGA-202ENST00000334654 ZRANB1Q9UGI0 708 aa24.02■■□□□ 1.44
CHGA-202ENST00000334654 KIF20BQ96Q89 1820 aa24.02■■□□□ 1.44
CHGA-202ENST00000334654 HSPA1LP34931 641 aa24.01■■□□□ 1.43
CHGA-202ENST00000334654 LRRC59Q96AG4 307 aaKnown RBP24.01■■□□□ 1.43
CHGA-202ENST00000334654 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
CHGA-202ENST00000334654 USP31Q70CQ4 1352 aa24■■□□□ 1.43
CHGA-202ENST00000334654 USP54Q70EL1 1684 aa24■■□□□ 1.43
CHGA-202ENST00000334654 ABTB2Q8N961 1025 aa24■■□□□ 1.43
CHGA-202ENST00000334654 NPC1L1Q9UHC9 1359 aa23.98■■□□□ 1.43
CHGA-202ENST00000334654 NUTM2GQ5VZR2 741 aa23.98■■□□□ 1.43
CHGA-202ENST00000334654 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
CHGA-202ENST00000334654 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
CHGA-202ENST00000334654 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
CHGA-202ENST00000334654 ARHGEF10O15013 1369 aa23.97■■□□□ 1.43
CHGA-202ENST00000334654 LMOD2Q6P5Q4 547 aa23.96■■□□□ 1.43
CHGA-202ENST00000334654 ANKRD26Q9UPS8 1709 aa23.96■■□□□ 1.43
CHGA-202ENST00000334654 PNPLA6Q8IY17 1366 aa23.96■■□□□ 1.43
CHGA-202ENST00000334654 NLRP6P59044 892 aa23.95■■□□□ 1.42
CHGA-202ENST00000334654 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.42
CHGA-202ENST00000334654 CRYBG1Q9Y4K1 1723 aa23.95■■□□□ 1.42
CHGA-202ENST00000334654 NSD2O96028 1365 aa23.94■■□□□ 1.42
CHGA-202ENST00000334654 COL22A1Q8NFW1 1626 aaPredicted RBP23.94■■□□□ 1.42
CHGA-202ENST00000334654 USP19O94966 1318 aa23.94■■□□□ 1.42
CHGA-202ENST00000334654 NLRP13Q86W25 1043 aa23.94■■□□□ 1.42
CHGA-202ENST00000334654 SHPRHQ149N8 1683 aa23.92■■□□□ 1.42
CHGA-202ENST00000334654 CC2D1BQ5T0F9 858 aaKnown RBP23.92■■□□□ 1.42
CHGA-202ENST00000334654 SLIT3O75094 1523 aa23.91■■□□□ 1.42
CHGA-202ENST00000334654 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
CHGA-202ENST00000334654 COG3Q96JB2 828 aa23.9■■□□□ 1.42
CHGA-202ENST00000334654 ABCA3Q99758 1704 aa23.9■■□□□ 1.42
CHGA-202ENST00000334654 JCADQ9P266 1359 aa23.89■■□□□ 1.42
CHGA-202ENST00000334654 PHRF1Q9P1Y6 1649 aaKnown RBP23.89■■□□□ 1.41
CHGA-202ENST00000334654 CNGB1Q14028 1251 aaPredicted RBP23.87■■□□□ 1.41
CHGA-202ENST00000334654 FBLN1P23142 703 aa23.87■■□□□ 1.41
CHGA-202ENST00000334654 GCP02774 474 aa23.86■■□□□ 1.41
CHGA-202ENST00000334654 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
CHGA-202ENST00000334654 NFAT5O94916 1531 aa23.86■■□□□ 1.41
CHGA-202ENST00000334654 PARD3Q8TEW0 1356 aa23.85■■□□□ 1.41
CHGA-202ENST00000334654 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
CHGA-202ENST00000334654 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.41
CHGA-202ENST00000334654 MAP2P11137 1827 aaKnown RBP23.82■■□□□ 1.4
CHGA-202ENST00000334654 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
CHGA-202ENST00000334654 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
CHGA-202ENST00000334654 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
CHGA-202ENST00000334654 AATKQ6ZMQ8 1374 aa23.81■■□□□ 1.4
CHGA-202ENST00000334654 SOX12O15370 315 aa23.8■■□□□ 1.4
CHGA-202ENST00000334654 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
CHGA-202ENST00000334654 RALBP1Q15311 655 aa23.79■■□□□ 1.4
CHGA-202ENST00000334654 ARHGEF25Q86VW2 580 aa23.78■■□□□ 1.4
CHGA-202ENST00000334654 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
CHGA-202ENST00000334654 POLKQ9UBT6 870 aa23.77■■□□□ 1.4
CHGA-202ENST00000334654 LTN1O94822 1766 aa23.77■■□□□ 1.4
CHGA-202ENST00000334654 CPDO75976 1380 aa23.77■■□□□ 1.4
CHGA-202ENST00000334654 LRP6O75581 1613 aa23.77■■□□□ 1.39
CHGA-202ENST00000334654 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
CHGA-202ENST00000334654 MAP3K19Q56UN5 1328 aa23.76■■□□□ 1.39
CHGA-202ENST00000334654 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
CHGA-202ENST00000334654 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
CHGA-202ENST00000334654 PPP2R1AP30153 589 aa23.75■■□□□ 1.39
CHGA-202ENST00000334654 ILDR1Q86SU0 546 aaPredicted RBP23.75■■□□□ 1.39
CHGA-202ENST00000334654 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
CHGA-202ENST00000334654 COL18A1P39060 1754 aa23.75■■□□□ 1.39
CHGA-202ENST00000334654 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
CHGA-202ENST00000334654 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
CHGA-202ENST00000334654 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
CHGA-202ENST00000334654 ANP32CO43423 234 aa23.74■■□□□ 1.39
CHGA-202ENST00000334654 SMG6Q86US8 1419 aaKnown RBP23.73■■□□□ 1.39
CHGA-202ENST00000334654 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
CHGA-202ENST00000334654 FAM83GA6ND36 823 aa23.71■■□□□ 1.39
CHGA-202ENST00000334654 ADAMTS2O95450 1211 aa23.7■■□□□ 1.38
CHGA-202ENST00000334654 MTHFSP49914 203 aa23.7■■□□□ 1.38
CHGA-202ENST00000334654 MYBBP1AQ9BQG0 1328 aaKnown RBP23.7■■□□□ 1.38
CHGA-202ENST00000334654 RGPD5Q99666 1765 aa23.69■■□□□ 1.38
CHGA-202ENST00000334654 LMO7Q8WWI1 1683 aa23.69■■□□□ 1.38
CHGA-202ENST00000334654 CHRNA2Q15822 529 aa23.69■■□□□ 1.38
CHGA-202ENST00000334654 AXIN2Q9Y2T1 843 aa23.68■■□□□ 1.38
CHGA-202ENST00000334654 KIF24Q5T7B8 1368 aa23.68■■□□□ 1.38
CHGA-202ENST00000334654 IP6K1Q92551 441 aa23.68■■□□□ 1.38
CHGA-202ENST00000334654 PRDM11Q9NQV5 511 aa23.68■■□□□ 1.38
CHGA-202ENST00000334654 COL14A1Q05707 1796 aaKnown RBP23.67■■□□□ 1.38
CHGA-202ENST00000334654 HOXC9P31274 260 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms