RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 H3BQV1 296 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 TNRQ92752 1358 aa18.36■□□□□ 0.53
C9orf47-201ENST00000334490 CLASRPQ8N2M8 674 aaKnown RBP18.36■□□□□ 0.53
C9orf47-201ENST00000334490 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
C9orf47-201ENST00000334490 TRDNQ13061 729 aa18.36■□□□□ 0.53
C9orf47-201ENST00000334490 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
C9orf47-201ENST00000334490 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
C9orf47-201ENST00000334490 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
C9orf47-201ENST00000334490 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
C9orf47-201ENST00000334490 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
C9orf47-201ENST00000334490 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
C9orf47-201ENST00000334490 KDM5BQ9UGL1 1544 aa18.34■□□□□ 0.53
C9orf47-201ENST00000334490 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
C9orf47-201ENST00000334490 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
C9orf47-201ENST00000334490 WASHC4Q2M389 1173 aa18.34■□□□□ 0.53
C9orf47-201ENST00000334490 ADAMTS2O95450 1211 aa18.33■□□□□ 0.53
C9orf47-201ENST00000334490 MYL6BP14649 208 aa18.33■□□□□ 0.53
C9orf47-201ENST00000334490 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
C9orf47-201ENST00000334490 NOB1Q9ULX3 412 aaKnown RBP18.33■□□□□ 0.52
C9orf47-201ENST00000334490 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
C9orf47-201ENST00000334490 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
C9orf47-201ENST00000334490 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
C9orf47-201ENST00000334490 BCAR3O75815 825 aa18.31■□□□□ 0.52
C9orf47-201ENST00000334490 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
C9orf47-201ENST00000334490 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
C9orf47-201ENST00000334490 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
C9orf47-201ENST00000334490 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
C9orf47-201ENST00000334490 CPLX1O14810 134 aa18.31■□□□□ 0.52
C9orf47-201ENST00000334490 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
C9orf47-201ENST00000334490 DHX16O60231 1041 aaKnown RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 GNAI2P04899 355 aa18.3■□□□□ 0.52
C9orf47-201ENST00000334490 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
C9orf47-201ENST00000334490 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 FOXD4L6Q3SYB3 417 aaPredicted RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 FOXD4L3Q6VB84 417 aaPredicted RBP18.3■□□□□ 0.52
C9orf47-201ENST00000334490 A2MP01023 1474 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 MCTP1Q6DN14 999 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
C9orf47-201ENST00000334490 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
C9orf47-201ENST00000334490 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
C9orf47-201ENST00000334490 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
C9orf47-201ENST00000334490 USHBP1Q8N6Y0 703 aa18.28■□□□□ 0.52
C9orf47-201ENST00000334490 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
C9orf47-201ENST00000334490 FYB1O15117 783 aa18.28■□□□□ 0.52
C9orf47-201ENST00000334490 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
C9orf47-201ENST00000334490 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
C9orf47-201ENST00000334490 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
C9orf47-201ENST00000334490 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
C9orf47-201ENST00000334490 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
C9orf47-201ENST00000334490 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.51
C9orf47-201ENST00000334490 PTCD1O75127 700 aaKnown RBP18.26■□□□□ 0.51
C9orf47-201ENST00000334490 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
C9orf47-201ENST00000334490 MSNP26038 577 aaKnown RBP18.26■□□□□ 0.51
C9orf47-201ENST00000334490 NFXL1Q6ZNB6 911 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 ATP6V1DQ9Y5K8 247 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 TPM4P67936 248 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 MCM10Q7L590 875 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
C9orf47-201ENST00000334490 ERICH2A1L162 156 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 RALYLQ86SE5 291 aaKnown RBP18.25■□□□□ 0.51
C9orf47-201ENST00000334490 UGGT2Q9NYU1 1516 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 RPRD2Q5VT52 1461 aaKnown RBP18.25■□□□□ 0.51
C9orf47-201ENST00000334490 TRIM29Q14134 588 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 CREBRFQ8IUR6 639 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
C9orf47-201ENST00000334490 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
C9orf47-201ENST00000334490 SCAF11Q99590 1463 aaKnown RBP18.24■□□□□ 0.51
C9orf47-201ENST00000334490 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
C9orf47-201ENST00000334490 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
C9orf47-201ENST00000334490 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
C9orf47-201ENST00000334490 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
C9orf47-201ENST00000334490 ERC1Q8IUD2 1116 aa18.23■□□□□ 0.51
C9orf47-201ENST00000334490 SIL1Q9H173 461 aa18.23■□□□□ 0.51
C9orf47-201ENST00000334490 ACEP12821 1306 aa18.22■□□□□ 0.51
C9orf47-201ENST00000334490 CDC45O75419 566 aa18.22■□□□□ 0.51
C9orf47-201ENST00000334490 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
C9orf47-201ENST00000334490 LRPPRCP42704 1394 aaKnown RBP18.22■□□□□ 0.51
C9orf47-201ENST00000334490 AMOTQ4VCS5 1084 aa18.22■□□□□ 0.51
C9orf47-201ENST00000334490 RTN4Q9NQC3 1192 aaKnown RBP18.22■□□□□ 0.51
C9orf47-201ENST00000334490 STARD3NLO95772 234 aa18.21■□□□□ 0.51
C9orf47-201ENST00000334490 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
C9orf47-201ENST00000334490 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
C9orf47-201ENST00000334490 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
C9orf47-201ENST00000334490 KIAA0556O60303 1618 aa18.21■□□□□ 0.51
C9orf47-201ENST00000334490 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.51
C9orf47-201ENST00000334490 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 379.9 ms