RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 PLXNC1O60486 1568 aa16.48■□□□□ 0.23
C12orf56-201ENST00000333722 RIMS2Q9UQ26 1411 aa16.48■□□□□ 0.23
C12orf56-201ENST00000333722 ATF7IPQ6VMQ6 1270 aa16.48■□□□□ 0.23
C12orf56-201ENST00000333722 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
C12orf56-201ENST00000333722 FCHSD2O94868 740 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 GNAI1P63096 354 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 ACEP12821 1306 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 TRIM27P14373 513 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
C12orf56-201ENST00000333722 SHROOM2Q13796 1616 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
C12orf56-201ENST00000333722 TRPM1Q7Z4N2 1603 aa16.46■□□□□ 0.23
C12orf56-201ENST00000333722 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
C12orf56-201ENST00000333722 UNC13BO14795 1591 aa16.46■□□□□ 0.23
C12orf56-201ENST00000333722 PIK3C2GO75747 1445 aa16.46■□□□□ 0.22
C12orf56-201ENST00000333722 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
C12orf56-201ENST00000333722 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
C12orf56-201ENST00000333722 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
C12orf56-201ENST00000333722 LTKP29376 864 aa16.45■□□□□ 0.22
C12orf56-201ENST00000333722 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
C12orf56-201ENST00000333722 E9PCH4 1651 aa16.45■□□□□ 0.22
C12orf56-201ENST00000333722 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
C12orf56-201ENST00000333722 TNRQ92752 1358 aa16.43■□□□□ 0.22
C12orf56-201ENST00000333722 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
C12orf56-201ENST00000333722 GZF1Q9H116 711 aaPredicted RBP16.43■□□□□ 0.22
C12orf56-201ENST00000333722 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
C12orf56-201ENST00000333722 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
C12orf56-201ENST00000333722 FOXO3O43524 673 aa16.41■□□□□ 0.22
C12orf56-201ENST00000333722 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
C12orf56-201ENST00000333722 BLMP54132 1417 aaPredicted RBP16.41■□□□□ 0.22
C12orf56-201ENST00000333722 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
C12orf56-201ENST00000333722 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
C12orf56-201ENST00000333722 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
C12orf56-201ENST00000333722 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
C12orf56-201ENST00000333722 METP08581 1390 aa16.4■□□□□ 0.22
C12orf56-201ENST00000333722 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
C12orf56-201ENST00000333722 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.22
C12orf56-201ENST00000333722 NEO1Q92859 1461 aa16.39■□□□□ 0.21
C12orf56-201ENST00000333722 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
C12orf56-201ENST00000333722 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
C12orf56-201ENST00000333722 F6X3S4 739 aa16.38■□□□□ 0.21
C12orf56-201ENST00000333722 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
C12orf56-201ENST00000333722 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
C12orf56-201ENST00000333722 ZNF521Q96K83 1311 aa16.37■□□□□ 0.21
C12orf56-201ENST00000333722 KCNA6P17658 529 aa16.37■□□□□ 0.21
C12orf56-201ENST00000333722 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
C12orf56-201ENST00000333722 ABCC3O15438 1527 aa16.37■□□□□ 0.21
C12orf56-201ENST00000333722 SEC24BO95487 1268 aa16.36■□□□□ 0.21
C12orf56-201ENST00000333722 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
C12orf56-201ENST00000333722 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
C12orf56-201ENST00000333722 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
C12orf56-201ENST00000333722 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
C12orf56-201ENST00000333722 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
C12orf56-201ENST00000333722 TEFQ10587 303 aa16.36■□□□□ 0.21
C12orf56-201ENST00000333722 TET3O43151 1660 aa16.35■□□□□ 0.21
C12orf56-201ENST00000333722 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
C12orf56-201ENST00000333722 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
C12orf56-201ENST00000333722 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
C12orf56-201ENST00000333722 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
C12orf56-201ENST00000333722 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
C12orf56-201ENST00000333722 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
C12orf56-201ENST00000333722 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
C12orf56-201ENST00000333722 MADDQ8WXG6 1647 aa16.34■□□□□ 0.21
C12orf56-201ENST00000333722 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
C12orf56-201ENST00000333722 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
C12orf56-201ENST00000333722 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.21
C12orf56-201ENST00000333722 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
C12orf56-201ENST00000333722 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
C12orf56-201ENST00000333722 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
C12orf56-201ENST00000333722 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
C12orf56-201ENST00000333722 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
C12orf56-201ENST00000333722 NSD2O96028 1365 aa16.32■□□□□ 0.2
C12orf56-201ENST00000333722 MYOM2P54296 1465 aa16.32■□□□□ 0.2
C12orf56-201ENST00000333722 FRAT2O75474 233 aaPredicted RBP16.31■□□□□ 0.2
C12orf56-201ENST00000333722 CEP152O94986 1710 aa16.31■□□□□ 0.2
C12orf56-201ENST00000333722 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
C12orf56-201ENST00000333722 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
C12orf56-201ENST00000333722 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
C12orf56-201ENST00000333722 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
C12orf56-201ENST00000333722 FOXD4L5Q5VV16 416 aaPredicted RBP16.31■□□□□ 0.2
C12orf56-201ENST00000333722 FOXD4L4Q8WXT5 416 aaPredicted RBP16.31■□□□□ 0.2
C12orf56-201ENST00000333722 SBNO2Q9Y2G9 1366 aa16.3■□□□□ 0.2
C12orf56-201ENST00000333722 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
C12orf56-201ENST00000333722 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
C12orf56-201ENST00000333722 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
C12orf56-201ENST00000333722 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
C12orf56-201ENST00000333722 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
C12orf56-201ENST00000333722 ANXA1P04083 346 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 CASC1Q6TDU7 716 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
C12orf56-201ENST00000333722 KDM5AP29375 1690 aaKnown RBP16.29■□□□□ 0.2
C12orf56-201ENST00000333722 KIF1BO60333 1816 aa16.29■□□□□ 0.2
C12orf56-201ENST00000333722 IL13P35225 146 aa16.28■□□□□ 0.2
C12orf56-201ENST00000333722 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms