RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 POGKQ9P215 609 aa13.86□□□□□ -0.19
CCDC172-201ENST00000333254 C8orf34Q49A92 452 aa13.85□□□□□ -0.19
CCDC172-201ENST00000333254 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
CCDC172-201ENST00000333254 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
CCDC172-201ENST00000333254 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC172-201ENST00000333254 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
CCDC172-201ENST00000333254 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
CCDC172-201ENST00000333254 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
CCDC172-201ENST00000333254 C3P01024 1663 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 EDC4Q6P2E9 1401 aaKnown RBP13.84□□□□□ -0.19
CCDC172-201ENST00000333254 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC172-201ENST00000333254 USP35Q9P2H5 1018 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 MINK1Q8N4C8 1332 aaPredicted RBP13.84□□□□□ -0.19
CCDC172-201ENST00000333254 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
CCDC172-201ENST00000333254 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
CCDC172-201ENST00000333254 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
CCDC172-201ENST00000333254 STK26Q9P289 416 aa13.83□□□□□ -0.2
CCDC172-201ENST00000333254 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.2
CCDC172-201ENST00000333254 PPM1GO15355 546 aaPredicted RBP13.82□□□□□ -0.2
CCDC172-201ENST00000333254 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
CCDC172-201ENST00000333254 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
CCDC172-201ENST00000333254 RRP7AQ9Y3A4 280 aaKnown RBP13.82□□□□□ -0.2
CCDC172-201ENST00000333254 AATKQ6ZMQ8 1374 aa13.81□□□□□ -0.2
CCDC172-201ENST00000333254 NRKQ7Z2Y5 1582 aa13.81□□□□□ -0.2
CCDC172-201ENST00000333254 GGNBP2Q9H3C7 697 aa13.81□□□□□ -0.2
CCDC172-201ENST00000333254 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
CCDC172-201ENST00000333254 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
CCDC172-201ENST00000333254 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
CCDC172-201ENST00000333254 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
CCDC172-201ENST00000333254 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
CCDC172-201ENST00000333254 FCHSD2O94868 740 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 IGHDP01880 384 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC172-201ENST00000333254 NEUROD2Q15784 382 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
CCDC172-201ENST00000333254 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
CCDC172-201ENST00000333254 DLG5Q8TDM6 1919 aa13.78□□□□□ -0.2
CCDC172-201ENST00000333254 NALCNQ8IZF0 1738 aa13.78□□□□□ -0.2
CCDC172-201ENST00000333254 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
CCDC172-201ENST00000333254 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
CCDC172-201ENST00000333254 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
CCDC172-201ENST00000333254 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
CCDC172-201ENST00000333254 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
CCDC172-201ENST00000333254 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
CCDC172-201ENST00000333254 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
CCDC172-201ENST00000333254 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
CCDC172-201ENST00000333254 RLBP1P12271 317 aa13.75□□□□□ -0.21
CCDC172-201ENST00000333254 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
CCDC172-201ENST00000333254 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
CCDC172-201ENST00000333254 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
CCDC172-201ENST00000333254 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
CCDC172-201ENST00000333254 RGS3P49796 1198 aa13.75□□□□□ -0.21
CCDC172-201ENST00000333254 DZIP1LQ8IYY4 767 aaKnown RBP13.75□□□□□ -0.21
CCDC172-201ENST00000333254 TNRQ92752 1358 aa13.74□□□□□ -0.21
CCDC172-201ENST00000333254 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
CCDC172-201ENST00000333254 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
CCDC172-201ENST00000333254 METP08581 1390 aa13.74□□□□□ -0.21
CCDC172-201ENST00000333254 DEKP35659 375 aaKnown RBP13.73□□□□□ -0.21
CCDC172-201ENST00000333254 POLKQ9UBT6 870 aa13.73□□□□□ -0.21
CCDC172-201ENST00000333254 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
CCDC172-201ENST00000333254 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
CCDC172-201ENST00000333254 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
CCDC172-201ENST00000333254 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
CCDC172-201ENST00000333254 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
CCDC172-201ENST00000333254 NBR1Q14596 966 aa13.72□□□□□ -0.21
CCDC172-201ENST00000333254 NEFMP07197 916 aa13.72□□□□□ -0.21
CCDC172-201ENST00000333254 RIPK4P57078 832 aa13.72□□□□□ -0.21
CCDC172-201ENST00000333254 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
CCDC172-201ENST00000333254 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
CCDC172-201ENST00000333254 RGPD1P0DJD0 1748 aa13.71□□□□□ -0.21
CCDC172-201ENST00000333254 ADAMTS13Q76LX8 1427 aa13.71□□□□□ -0.21
CCDC172-201ENST00000333254 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
CCDC172-201ENST00000333254 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.21
CCDC172-201ENST00000333254 SMC4Q9NTJ3 1288 aa13.71□□□□□ -0.21
CCDC172-201ENST00000333254 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.22
CCDC172-201ENST00000333254 USP19O94966 1318 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 DIP2AQ14689 1571 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 WAPLQ7Z5K2 1190 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
CCDC172-201ENST00000333254 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
CCDC172-201ENST00000333254 TRIM27P14373 513 aa13.69□□□□□ -0.22
CCDC172-201ENST00000333254 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
CCDC172-201ENST00000333254 SLIT1O75093 1534 aa13.69□□□□□ -0.22
CCDC172-201ENST00000333254 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
CCDC172-201ENST00000333254 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CCDC172-201ENST00000333254 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
CCDC172-201ENST00000333254 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
CCDC172-201ENST00000333254 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
CCDC172-201ENST00000333254 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
CCDC172-201ENST00000333254 IL13P35225 146 aa13.68□□□□□ -0.22
CCDC172-201ENST00000333254 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms