RNA–Protein interactions for RNA: ENST00000333167.12

ACAA1-202, Transcript of acetyl-CoA acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACAA1, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-202ENST00000333167 NUDCQ9Y266 331 aa28.45■■■□□ 2.14
ACAA1-202ENST00000333167 ADGRL3Q9HAR2 1447 aa28.44■■■□□ 2.14
ACAA1-202ENST00000333167 CCDC146Q8IYE0 955 aa28.44■■■□□ 2.14
ACAA1-202ENST00000333167 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
ACAA1-202ENST00000333167 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
ACAA1-202ENST00000333167 HSPA2P54652 639 aa28.43■■■□□ 2.14
ACAA1-202ENST00000333167 PMFBP1Q8TBY8 1022 aa28.42■■■□□ 2.14
ACAA1-202ENST00000333167 SUPT16HQ9Y5B9 1047 aaKnown RBP28.42■■■□□ 2.14
ACAA1-202ENST00000333167 FBLN1P23142 703 aa28.39■■■□□ 2.14
ACAA1-202ENST00000333167 PNPLA6Q8IY17 1366 aa28.39■■■□□ 2.13
ACAA1-202ENST00000333167 PDE3BQ13370 1112 aa28.39■■■□□ 2.13
ACAA1-202ENST00000333167 COG3Q96JB2 828 aa28.38■■■□□ 2.13
ACAA1-202ENST00000333167 POLKQ9UBT6 870 aa28.38■■■□□ 2.13
ACAA1-202ENST00000333167 LMTK3Q96Q04 1460 aa28.38■■■□□ 2.13
ACAA1-202ENST00000333167 AATKQ6ZMQ8 1374 aa28.36■■■□□ 2.13
ACAA1-202ENST00000333167 NGDNQ8NEJ9 315 aaKnown RBP28.36■■■□□ 2.13
ACAA1-202ENST00000333167 APAF1O14727 1248 aa28.35■■■□□ 2.13
ACAA1-202ENST00000333167 FKBP8Q14318 412 aa28.34■■■□□ 2.13
ACAA1-202ENST00000333167 OVOS2A0A0J9YW53 1432 aa28.34■■■□□ 2.13
ACAA1-202ENST00000333167 OVOS2Q6IE36 1432 aa28.34■■■□□ 2.13
ACAA1-202ENST00000333167 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
ACAA1-202ENST00000333167 CDCA7LQ96GN5 454 aa28.34■■■□□ 2.13
ACAA1-202ENST00000333167 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
ACAA1-202ENST00000333167 TTC21AQ8NDW8 1320 aa28.32■■■□□ 2.12
ACAA1-202ENST00000333167 NEFLP07196 543 aa28.32■■■□□ 2.12
ACAA1-202ENST00000333167 RUNDC1Q96C34 613 aa28.3■■■□□ 2.12
ACAA1-202ENST00000333167 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
ACAA1-202ENST00000333167 IQSEC2Q5JU85 1478 aa28.3■■■□□ 2.12
ACAA1-202ENST00000333167 U2AF1L5P0DN76 240 aaPredicted RBP28.29■■■□□ 2.12
ACAA1-202ENST00000333167 U2AF1Q01081 240 aaKnown RBP eCLIP28.29■■■□□ 2.124e-6■□□□□ 8.3
ACAA1-202ENST00000333167 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
ACAA1-202ENST00000333167 MAP2P11137 1827 aaKnown RBP28.29■■■□□ 2.12
ACAA1-202ENST00000333167 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
ACAA1-202ENST00000333167 DIAPH1O60610 1272 aaKnown RBP28.28■■■□□ 2.12
ACAA1-202ENST00000333167 PHF8Q9UPP1 1060 aa28.28■■■□□ 2.12
ACAA1-202ENST00000333167 CDK12Q9NYV4 1490 aaPredicted RBP28.28■■■□□ 2.12
ACAA1-202ENST00000333167 USP31Q70CQ4 1352 aa28.26■■■□□ 2.11
ACAA1-202ENST00000333167 PPM1GO15355 546 aaPredicted RBP28.26■■■□□ 2.11
ACAA1-202ENST00000333167 U2SURPO15042 1029 aaKnown RBP28.25■■■□□ 2.11
ACAA1-202ENST00000333167 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
ACAA1-202ENST00000333167 RRS1Q15050 365 aaKnown RBP28.24■■■□□ 2.11
ACAA1-202ENST00000333167 NGEFQ8N5V2 710 aa28.24■■■□□ 2.11
ACAA1-202ENST00000333167 PIK3C2AO00443 1686 aa28.24■■■□□ 2.11
ACAA1-202ENST00000333167 TCP11L2Q8N4U5 519 aa28.22■■■□□ 2.11
ACAA1-202ENST00000333167 RNF123Q5XPI4 1314 aa28.21■■■□□ 2.11
ACAA1-202ENST00000333167 TMEM94Q12767 1356 aa28.2■■■□□ 2.11
ACAA1-202ENST00000333167 GOLGA2Q08379 1002 aa28.2■■■□□ 2.11
ACAA1-202ENST00000333167 ESCO1Q5FWF5 840 aa28.2■■■□□ 2.11
ACAA1-202ENST00000333167 PLEKHF1Q96S99 279 aa28.2■■■□□ 2.11
ACAA1-202ENST00000333167 IL13P35225 146 aa28.19■■■□□ 2.1
ACAA1-202ENST00000333167 IRX6P78412 446 aaPredicted RBP28.19■■■□□ 2.1
ACAA1-202ENST00000333167 C19orf44Q9H6X5 657 aa28.19■■■□□ 2.1
ACAA1-202ENST00000333167 RRP7AQ9Y3A4 280 aaKnown RBP28.18■■■□□ 2.1
ACAA1-202ENST00000333167 SLFN5Q08AF3 891 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 ORAI2Q96SN7 254 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 PHF23Q9BUL5 403 aaPredicted RBP28.16■■■□□ 2.1
ACAA1-202ENST00000333167 NCOA3Q9Y6Q9 1424 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 MARF1Q9Y4F3 1742 aaKnown RBP28.16■■■□□ 2.1
ACAA1-202ENST00000333167 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 DUSP27Q5VZP5 1158 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 WWC1Q8IX03 1113 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 DMRT2Q9Y5R5 561 aa28.16■■■□□ 2.1
ACAA1-202ENST00000333167 TRMT2AQ8IZ69 625 aaKnown RBP28.15■■■□□ 2.1
ACAA1-202ENST00000333167 PEAK1Q9H792 1746 aa28.15■■■□□ 2.1
ACAA1-202ENST00000333167 C1orf167Q5SNV9 1468 aa28.15■■■□□ 2.1
ACAA1-202ENST00000333167 SPINK5Q9NQ38 1064 aaPredicted RBP28.14■■■□□ 2.1
ACAA1-202ENST00000333167 RCAN3Q9UKA8 241 aa28.14■■■□□ 2.09
ACAA1-202ENST00000333167 NLRP6P59044 892 aa28.13■■■□□ 2.09
ACAA1-202ENST00000333167 NCBP3Q53F19 620 aaKnown RBP28.13■■■□□ 2.09
ACAA1-202ENST00000333167 NEUROD2Q15784 382 aa28.12■■■□□ 2.09
ACAA1-202ENST00000333167 LRRC7Q96NW7 1537 aa28.12■■■□□ 2.09
ACAA1-202ENST00000333167 SOX12O15370 315 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 PAK3O75914 559 aaPredicted RBP28.11■■■□□ 2.09
ACAA1-202ENST00000333167 FCHSD2O94868 740 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 NUTM2GQ5VZR2 741 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 DCCP43146 1447 aa28.11■■■□□ 2.09
ACAA1-202ENST00000333167 ABTB2Q8N961 1025 aa28.1■■■□□ 2.09
ACAA1-202ENST00000333167 MST1RQ04912 1400 aa28.1■■■□□ 2.09
ACAA1-202ENST00000333167 MAP3K19Q56UN5 1328 aa28.1■■■□□ 2.09
ACAA1-202ENST00000333167 PSME1Q06323 249 aa28.09■■■□□ 2.09
ACAA1-202ENST00000333167 E9PSI1 815 aa28.07■■■□□ 2.08
ACAA1-202ENST00000333167 TMPOP42166 694 aaKnown RBP28.07■■■□□ 2.08
ACAA1-202ENST00000333167 EIF4A2Q14240 407 aaKnown RBP28.07■■■□□ 2.08
ACAA1-202ENST00000333167 PNNQ9H307 717 aaKnown RBP28.07■■■□□ 2.08
ACAA1-202ENST00000333167 MAPK8IP3Q9UPT6 1336 aa28.07■■■□□ 2.08
ACAA1-202ENST00000333167 ATF3P18847 181 aa28.06■■■□□ 2.08
ACAA1-202ENST00000333167 KIF1AQ12756 1690 aa28.06■■■□□ 2.08
ACAA1-202ENST00000333167 FOXO3O43524 673 aa28.06■■■□□ 2.08
ACAA1-202ENST00000333167 HMOX1P09601 288 aa28.06■■■□□ 2.08
ACAA1-202ENST00000333167 PRKAR2BP31323 418 aa28.06■■■□□ 2.08
ACAA1-202ENST00000333167 HSP90AB2PQ58FF8 381 aa28.05■■■□□ 2.08
ACAA1-202ENST00000333167 SBNO1A3KN83 1393 aa28.05■■■□□ 2.08
ACAA1-202ENST00000333167 WDR63Q8IWG1 891 aa28.04■■■□□ 2.08
ACAA1-202ENST00000333167 XIRP1Q702N8 1843 aaKnown RBP28.04■■■□□ 2.08
ACAA1-202ENST00000333167 ERICH6BQ5W0A0 696 aa28.04■■■□□ 2.08
ACAA1-202ENST00000333167 ZNF335Q9H4Z2 1342 aaPredicted RBP28.03■■■□□ 2.08
ACAA1-202ENST00000333167 RRP1P56182 461 aaKnown RBP28.02■■■□□ 2.08
ACAA1-202ENST00000333167 XPCQ01831 940 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms