RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 THEMISQ8N1K5 641 aaPredicted RBP21.43■■□□□ 1.02
LCK-201ENST00000333070 RSPH6AQ9H0K4 717 aa21.43■■□□□ 1.02
LCK-201ENST00000333070 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
LCK-201ENST00000333070 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
LCK-201ENST00000333070 DAXXQ9UER7 740 aaPredicted RBP21.41■■□□□ 1.02
LCK-201ENST00000333070 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
LCK-201ENST00000333070 APAF1O14727 1248 aa21.4■■□□□ 1.02
LCK-201ENST00000333070 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
LCK-201ENST00000333070 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.02
LCK-201ENST00000333070 CPSF1Q10570 1443 aaKnown RBP21.39■■□□□ 1.02
LCK-201ENST00000333070 PTPRUQ92729 1446 aa21.39■■□□□ 1.02
LCK-201ENST00000333070 FAM43AQ8N2R8 423 aa21.39■■□□□ 1.01
LCK-201ENST00000333070 NGEFQ8N5V2 710 aa21.39■■□□□ 1.01
LCK-201ENST00000333070 TBX22Q9Y458 520 aa21.39■■□□□ 1.01
LCK-201ENST00000333070 NUDT16Q96DE0 195 aaKnown RBP21.38■■□□□ 1.01
LCK-201ENST00000333070 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
LCK-201ENST00000333070 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
LCK-201ENST00000333070 ADGRB2O60241 1585 aa21.38■■□□□ 1.01
LCK-201ENST00000333070 RIMS1Q86UR5 1692 aaKnown RBP21.38■■□□□ 1.01
LCK-201ENST00000333070 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.37■■□□□ 1.01
LCK-201ENST00000333070 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
LCK-201ENST00000333070 CCDC61Q9Y6R9 512 aa21.36■■□□□ 1.01
LCK-201ENST00000333070 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
LCK-201ENST00000333070 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
LCK-201ENST00000333070 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
LCK-201ENST00000333070 ADAMTSL3P82987 1691 aa21.35■■□□□ 1.01
LCK-201ENST00000333070 CDC42BPGQ6DT37 1551 aa21.35■■□□□ 1.01
LCK-201ENST00000333070 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
LCK-201ENST00000333070 PRR36Q9H6K5 1346 aa21.33■■□□□ 1.01
LCK-201ENST00000333070 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1.01
LCK-201ENST00000333070 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
LCK-201ENST00000333070 SLFN5Q08AF3 891 aa21.33■■□□□ 1
LCK-201ENST00000333070 RUNDC1Q96C34 613 aa21.33■■□□□ 1
LCK-201ENST00000333070 CRBNQ96SW2 442 aa21.33■■□□□ 1
LCK-201ENST00000333070 SLC4A3P48751 1232 aa21.32■■□□□ 1
LCK-201ENST00000333070 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
LCK-201ENST00000333070 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
LCK-201ENST00000333070 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
LCK-201ENST00000333070 IQSEC2Q5JU85 1478 aa21.31■■□□□ 1
LCK-201ENST00000333070 AKAP12Q02952 1782 aa21.31■■□□□ 1
LCK-201ENST00000333070 PTCH1Q13635 1447 aa21.31■■□□□ 1
LCK-201ENST00000333070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.3■■□□□ 1
LCK-201ENST00000333070 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
LCK-201ENST00000333070 PLIN1O60240 522 aa21.3■■□□□ 1
LCK-201ENST00000333070 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
LCK-201ENST00000333070 FAM161AQ3B820 660 aa21.29■■□□□ 1
LCK-201ENST00000333070 CENPQQ7L2Z9 268 aaPredicted RBP21.28■■□□□ 1
LCK-201ENST00000333070 SKAP1Q86WV1 359 aa21.28■■□□□ 1
LCK-201ENST00000333070 TOPAZ1Q8N9V7 1692 aa21.28■■□□□ 1
LCK-201ENST00000333070 ITSN1Q15811 1721 aa21.27■■□□□ 1
LCK-201ENST00000333070 SPINK5Q9NQ38 1064 aaPredicted RBP21.27■■□□□ 1
LCK-201ENST00000333070 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
LCK-201ENST00000333070 ZNF692Q9BU19 519 aaPredicted RBP21.27■■□□□ 1
LCK-201ENST00000333070 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
LCK-201ENST00000333070 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
LCK-201ENST00000333070 FRAT2O75474 233 aaPredicted RBP21.26■□□□□ 0.99
LCK-201ENST00000333070 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
LCK-201ENST00000333070 WWC1Q8IX03 1113 aa21.26■□□□□ 0.99
LCK-201ENST00000333070 TCP11L2Q8N4U5 519 aa21.26■□□□□ 0.99
LCK-201ENST00000333070 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
LCK-201ENST00000333070 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
LCK-201ENST00000333070 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
LCK-201ENST00000333070 E9PSI1 815 aa21.25■□□□□ 0.99
LCK-201ENST00000333070 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
LCK-201ENST00000333070 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
LCK-201ENST00000333070 DMRT2Q9Y5R5 561 aa21.24■□□□□ 0.99
LCK-201ENST00000333070 C8orf34Q49A92 452 aa21.24■□□□□ 0.99
LCK-201ENST00000333070 NME9Q86XW9 330 aa21.24■□□□□ 0.99
LCK-201ENST00000333070 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
LCK-201ENST00000333070 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
LCK-201ENST00000333070 CCDC27Q2M243 656 aa21.22■□□□□ 0.99
LCK-201ENST00000333070 NKTRP30414 1462 aaKnown RBP21.21■□□□□ 0.99
LCK-201ENST00000333070 DIAPH1O60610 1272 aaKnown RBP21.21■□□□□ 0.99
LCK-201ENST00000333070 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.99
LCK-201ENST00000333070 PLEKHF1Q96S99 279 aa21.2■□□□□ 0.98
LCK-201ENST00000333070 ZRANB1Q9UGI0 708 aa21.2■□□□□ 0.98
LCK-201ENST00000333070 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
LCK-201ENST00000333070 RRP7AQ9Y3A4 280 aaKnown RBP21.2■□□□□ 0.98
LCK-201ENST00000333070 NRKQ7Z2Y5 1582 aa21.19■□□□□ 0.98
LCK-201ENST00000333070 ACEP12821 1306 aa21.19■□□□□ 0.98
LCK-201ENST00000333070 FBLN1P23142 703 aa21.19■□□□□ 0.98
LCK-201ENST00000333070 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
LCK-201ENST00000333070 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
LCK-201ENST00000333070 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
LCK-201ENST00000333070 KCNA6P17658 529 aa21.17■□□□□ 0.98
LCK-201ENST00000333070 COG3Q96JB2 828 aa21.17■□□□□ 0.98
LCK-201ENST00000333070 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
LCK-201ENST00000333070 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
LCK-201ENST00000333070 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
LCK-201ENST00000333070 USP6P35125 1406 aa21.16■□□□□ 0.98
LCK-201ENST00000333070 CHD2O14647 1828 aaKnown RBP21.15■□□□□ 0.98
LCK-201ENST00000333070 SSH2Q76I76 1423 aa21.15■□□□□ 0.98
LCK-201ENST00000333070 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
LCK-201ENST00000333070 EMILIN1Q9Y6C2 1016 aa21.14■□□□□ 0.97
LCK-201ENST00000333070 RGPD8O14715 1765 aaPredicted RBP21.13■□□□□ 0.97
LCK-201ENST00000333070 PNNQ9H307 717 aaKnown RBP21.12■□□□□ 0.97
LCK-201ENST00000333070 FCHSD2O94868 740 aa21.12■□□□□ 0.97
LCK-201ENST00000333070 TMPOP42166 694 aaKnown RBP21.12■□□□□ 0.97
LCK-201ENST00000333070 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
LCK-201ENST00000333070 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms