RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
SYN3-201ENST00000332840 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
SYN3-201ENST00000332840 ATP7BP35670 1465 aa13.72□□□□□ -0.21
SYN3-201ENST00000332840 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
SYN3-201ENST00000332840 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
SYN3-201ENST00000332840 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
SYN3-201ENST00000332840 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
SYN3-201ENST00000332840 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
SYN3-201ENST00000332840 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
SYN3-201ENST00000332840 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
SYN3-201ENST00000332840 HAP1P54257 671 aaPredicted RBP13.69□□□□□ -0.22
SYN3-201ENST00000332840 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
SYN3-201ENST00000332840 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
SYN3-201ENST00000332840 ATRNO75882 1429 aa13.68□□□□□ -0.22
SYN3-201ENST00000332840 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
SYN3-201ENST00000332840 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
SYN3-201ENST00000332840 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
SYN3-201ENST00000332840 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
SYN3-201ENST00000332840 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
SYN3-201ENST00000332840 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
SYN3-201ENST00000332840 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
SYN3-201ENST00000332840 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
SYN3-201ENST00000332840 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
SYN3-201ENST00000332840 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
SYN3-201ENST00000332840 GLI3P10071 1580 aa13.65□□□□□ -0.22
SYN3-201ENST00000332840 ACEP12821 1306 aa13.64□□□□□ -0.23
SYN3-201ENST00000332840 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
SYN3-201ENST00000332840 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
SYN3-201ENST00000332840 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
SYN3-201ENST00000332840 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
SYN3-201ENST00000332840 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
SYN3-201ENST00000332840 BCL9LQ86UU0 1499 aa13.63□□□□□ -0.23
SYN3-201ENST00000332840 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
SYN3-201ENST00000332840 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
SYN3-201ENST00000332840 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
SYN3-201ENST00000332840 TOPAZ1Q8N9V7 1692 aa13.6□□□□□ -0.23
SYN3-201ENST00000332840 CABLES1Q8TDN4 633 aa13.6□□□□□ -0.23
SYN3-201ENST00000332840 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
SYN3-201ENST00000332840 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
SYN3-201ENST00000332840 CABP1Q9NZU7 370 aa13.6□□□□□ -0.23
SYN3-201ENST00000332840 SLIT2O94813 1529 aa13.59□□□□□ -0.23
SYN3-201ENST00000332840 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
SYN3-201ENST00000332840 UNC5CLQ8IV45 518 aa13.59□□□□□ -0.23
SYN3-201ENST00000332840 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
SYN3-201ENST00000332840 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
SYN3-201ENST00000332840 USP6P35125 1406 aa13.57□□□□□ -0.24
SYN3-201ENST00000332840 NLRP13Q86W25 1043 aa13.57□□□□□ -0.24
SYN3-201ENST00000332840 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
SYN3-201ENST00000332840 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
SYN3-201ENST00000332840 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
SYN3-201ENST00000332840 LRP5O75197 1615 aa13.56□□□□□ -0.24
SYN3-201ENST00000332840 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
SYN3-201ENST00000332840 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
SYN3-201ENST00000332840 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
SYN3-201ENST00000332840 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
SYN3-201ENST00000332840 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
SYN3-201ENST00000332840 USP19O94966 1318 aa13.55□□□□□ -0.24
SYN3-201ENST00000332840 USP47Q96K76 1375 aa13.55□□□□□ -0.24
SYN3-201ENST00000332840 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
SYN3-201ENST00000332840 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
SYN3-201ENST00000332840 VPS72Q15906 364 aa13.54□□□□□ -0.24
SYN3-201ENST00000332840 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
SYN3-201ENST00000332840 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
SYN3-201ENST00000332840 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
SYN3-201ENST00000332840 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYN3-201ENST00000332840 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
SYN3-201ENST00000332840 TESK2Q96S53 571 aa13.53□□□□□ -0.24
SYN3-201ENST00000332840 TERF2IPQ9NYB0 399 aa13.53□□□□□ -0.24
SYN3-201ENST00000332840 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
SYN3-201ENST00000332840 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
SYN3-201ENST00000332840 A0A0G2JS52 829 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 TMF1P82094 1093 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 MYT1Q01538 1121 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
SYN3-201ENST00000332840 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 BTG4Q9NY30 223 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 CPDO75976 1380 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 KTN1Q86UP2 1357 aaKnown RBP13.52□□□□□ -0.25
SYN3-201ENST00000332840 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.25
SYN3-201ENST00000332840 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
SYN3-201ENST00000332840 TTC21BQ7Z4L5 1316 aa13.51□□□□□ -0.25
SYN3-201ENST00000332840 NLRP6P59044 892 aa13.51□□□□□ -0.25
SYN3-201ENST00000332840 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
SYN3-201ENST00000332840 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
SYN3-201ENST00000332840 GCP02774 474 aa13.5□□□□□ -0.25
SYN3-201ENST00000332840 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
SYN3-201ENST00000332840 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
SYN3-201ENST00000332840 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
SYN3-201ENST00000332840 TNS1Q9HBL0 1735 aaKnown RBP13.49□□□□□ -0.25
SYN3-201ENST00000332840 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
SYN3-201ENST00000332840 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
SYN3-201ENST00000332840 EDC4Q6P2E9 1401 aaKnown RBP13.47□□□□□ -0.25
SYN3-201ENST00000332840 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
SYN3-201ENST00000332840 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
SYN3-201ENST00000332840 SLIT3O75094 1523 aa13.46□□□□□ -0.25
SYN3-201ENST00000332840 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
SYN3-201ENST00000332840 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
SYN3-201ENST00000332840 CRYBG1Q9Y4K1 1723 aa13.46□□□□□ -0.25
SYN3-201ENST00000332840 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms