RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ZNF142P52746 1687 aaPredicted RBP18.33■□□□□ 0.53
TRAIP-201ENST00000331456 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
TRAIP-201ENST00000331456 AKAP12Q02952 1782 aa18.33■□□□□ 0.52
TRAIP-201ENST00000331456 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
TRAIP-201ENST00000331456 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.52
TRAIP-201ENST00000331456 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.52
TRAIP-201ENST00000331456 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
TRAIP-201ENST00000331456 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
TRAIP-201ENST00000331456 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
TRAIP-201ENST00000331456 WWC1Q8IX03 1113 aa18.32■□□□□ 0.52
TRAIP-201ENST00000331456 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
TRAIP-201ENST00000331456 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
TRAIP-201ENST00000331456 PNPLA6Q8IY17 1366 aa18.31■□□□□ 0.52
TRAIP-201ENST00000331456 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
TRAIP-201ENST00000331456 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
TRAIP-201ENST00000331456 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
TRAIP-201ENST00000331456 COG3Q96JB2 828 aa18.3■□□□□ 0.52
TRAIP-201ENST00000331456 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
TRAIP-201ENST00000331456 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
TRAIP-201ENST00000331456 NME9Q86XW9 330 aa18.3■□□□□ 0.52
TRAIP-201ENST00000331456 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
TRAIP-201ENST00000331456 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
TRAIP-201ENST00000331456 TSHZ2Q9NRE2 1034 aa18.29■□□□□ 0.52
TRAIP-201ENST00000331456 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
TRAIP-201ENST00000331456 WDR63Q8IWG1 891 aa18.28■□□□□ 0.52
TRAIP-201ENST00000331456 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
TRAIP-201ENST00000331456 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
TRAIP-201ENST00000331456 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.52
TRAIP-201ENST00000331456 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
TRAIP-201ENST00000331456 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.52
TRAIP-201ENST00000331456 ACEP12821 1306 aa18.27■□□□□ 0.51
TRAIP-201ENST00000331456 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.51
TRAIP-201ENST00000331456 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.51
TRAIP-201ENST00000331456 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.51
TRAIP-201ENST00000331456 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
TRAIP-201ENST00000331456 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
TRAIP-201ENST00000331456 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
TRAIP-201ENST00000331456 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
TRAIP-201ENST00000331456 KCNA6P17658 529 aa18.24■□□□□ 0.51
TRAIP-201ENST00000331456 EXOC6Q8TAG9 804 aa18.24■□□□□ 0.51
TRAIP-201ENST00000331456 USP6P35125 1406 aa18.24■□□□□ 0.51
TRAIP-201ENST00000331456 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
TRAIP-201ENST00000331456 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
TRAIP-201ENST00000331456 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
TRAIP-201ENST00000331456 NRKQ7Z2Y5 1582 aa18.23■□□□□ 0.51
TRAIP-201ENST00000331456 PLIN1O60240 522 aa18.23■□□□□ 0.51
TRAIP-201ENST00000331456 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
TRAIP-201ENST00000331456 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
TRAIP-201ENST00000331456 FCHSD2O94868 740 aa18.22■□□□□ 0.51
TRAIP-201ENST00000331456 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
TRAIP-201ENST00000331456 NEFMP07197 916 aa18.22■□□□□ 0.51
TRAIP-201ENST00000331456 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
TRAIP-201ENST00000331456 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
TRAIP-201ENST00000331456 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
TRAIP-201ENST00000331456 FBLN1P23142 703 aa18.2■□□□□ 0.5
TRAIP-201ENST00000331456 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
TRAIP-201ENST00000331456 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
TRAIP-201ENST00000331456 CHD2O14647 1828 aaKnown RBP18.19■□□□□ 0.5
TRAIP-201ENST00000331456 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
TRAIP-201ENST00000331456 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
TRAIP-201ENST00000331456 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
TRAIP-201ENST00000331456 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
TRAIP-201ENST00000331456 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
TRAIP-201ENST00000331456 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
TRAIP-201ENST00000331456 IL13P35225 146 aa18.16■□□□□ 0.5
TRAIP-201ENST00000331456 FMN2Q9NZ56 1722 aa18.16■□□□□ 0.5
TRAIP-201ENST00000331456 RRS1Q15050 365 aaKnown RBP18.16■□□□□ 0.5
TRAIP-201ENST00000331456 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
TRAIP-201ENST00000331456 LRRC7Q96NW7 1537 aa18.16■□□□□ 0.5
TRAIP-201ENST00000331456 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
TRAIP-201ENST00000331456 RIPK4P57078 832 aa18.15■□□□□ 0.5
TRAIP-201ENST00000331456 RGPD8O14715 1765 aaPredicted RBP18.14■□□□□ 0.49
TRAIP-201ENST00000331456 IL16Q14005 1332 aa18.14■□□□□ 0.49
TRAIP-201ENST00000331456 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
TRAIP-201ENST00000331456 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
TRAIP-201ENST00000331456 NALCNQ8IZF0 1738 aa18.13■□□□□ 0.49
TRAIP-201ENST00000331456 BCAR3O75815 825 aa18.12■□□□□ 0.49
TRAIP-201ENST00000331456 C20orf194Q5TEA3 1177 aa18.12■□□□□ 0.49
TRAIP-201ENST00000331456 HMOX1P09601 288 aa18.11■□□□□ 0.49
TRAIP-201ENST00000331456 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
TRAIP-201ENST00000331456 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
TRAIP-201ENST00000331456 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
TRAIP-201ENST00000331456 ADGRL3Q9HAR2 1447 aa18.09■□□□□ 0.49
TRAIP-201ENST00000331456 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.49
TRAIP-201ENST00000331456 PDE3AQ14432 1141 aa18.08■□□□□ 0.49
TRAIP-201ENST00000331456 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.48
TRAIP-201ENST00000331456 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
TRAIP-201ENST00000331456 PHF8Q9UPP1 1060 aa18.07■□□□□ 0.48
TRAIP-201ENST00000331456 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
TRAIP-201ENST00000331456 EIF4A2Q14240 407 aaKnown RBP18.06■□□□□ 0.48
TRAIP-201ENST00000331456 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
TRAIP-201ENST00000331456 C14orf37Q86TY3 774 aa18.06■□□□□ 0.48
TRAIP-201ENST00000331456 PIK3C2AO00443 1686 aa18.05■□□□□ 0.48
TRAIP-201ENST00000331456 NLRP6P59044 892 aa18.05■□□□□ 0.48
TRAIP-201ENST00000331456 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
TRAIP-201ENST00000331456 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
TRAIP-201ENST00000331456 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
TRAIP-201ENST00000331456 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
TRAIP-201ENST00000331456 SOX12O15370 315 aa18.04■□□□□ 0.48
TRAIP-201ENST00000331456 FLT4P35916 1363 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms