RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TRAK1Q9UPV9 953 aa25.27■■□□□ 1.64
CMTM4-201ENST00000330687 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
CMTM4-201ENST00000330687 SAFB2Q14151 953 aaKnown RBP eCLIP25.26■■□□□ 1.63
CMTM4-201ENST00000330687 ZNF771Q7L3S4 317 aaPredicted RBP25.26■■□□□ 1.63
CMTM4-201ENST00000330687 CGNQ9P2M7 1197 aaKnown RBP25.26■■□□□ 1.63
CMTM4-201ENST00000330687 HS1BP3Q53T59 392 aa25.25■■□□□ 1.63
CMTM4-201ENST00000330687 BMP2KLQ5H9B9 411 aa25.25■■□□□ 1.63
CMTM4-201ENST00000330687 CEP170Q5SW79 1584 aa25.25■■□□□ 1.63
CMTM4-201ENST00000330687 ATP2B3Q16720 1220 aa25.25■■□□□ 1.63
CMTM4-201ENST00000330687 USP25Q9UHP3 1055 aa25.25■■□□□ 1.63
CMTM4-201ENST00000330687 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
CMTM4-201ENST00000330687 LRSAM1Q6UWE0 723 aa25.24■■□□□ 1.63
CMTM4-201ENST00000330687 ZBTB40Q9NUA8 1239 aa25.24■■□□□ 1.63
CMTM4-201ENST00000330687 IPO8O15397 1037 aaKnown RBP25.23■■□□□ 1.63
CMTM4-201ENST00000330687 PDLIM2Q96JY6 352 aa25.23■■□□□ 1.63
CMTM4-201ENST00000330687 CDC45O75419 566 aa25.22■■□□□ 1.63
CMTM4-201ENST00000330687 PLA2R1Q13018 1463 aa25.22■■□□□ 1.63
CMTM4-201ENST00000330687 CHMP4BQ9H444 224 aaKnown RBP25.22■■□□□ 1.63
CMTM4-201ENST00000330687 ZBTB22O15209 634 aa25.21■■□□□ 1.63
CMTM4-201ENST00000330687 KIF3AQ9Y496 699 aa25.21■■□□□ 1.63
CMTM4-201ENST00000330687 CDK11BP21127 795 aaKnown RBP25.2■■□□□ 1.62
CMTM4-201ENST00000330687 U2AF2P26368 475 aaKnown RBP eCLIP25.2■■□□□ 1.62
CMTM4-201ENST00000330687 TSPY26PQ9H489 355 aa25.2■■□□□ 1.62
CMTM4-201ENST00000330687 C16orf71Q8IYS4 520 aaPredicted RBP25.19■■□□□ 1.62
CMTM4-201ENST00000330687 PRDM15P57071 1507 aaPredicted RBP25.19■■□□□ 1.62
CMTM4-201ENST00000330687 ST18O60284 1047 aa25.19■■□□□ 1.62
CMTM4-201ENST00000330687 RABEP1Q15276 862 aa25.19■■□□□ 1.62
CMTM4-201ENST00000330687 PDCL2Q8N4E4 241 aa25.19■■□□□ 1.62
CMTM4-201ENST00000330687 MYRIPQ8NFW9 859 aa25.19■■□□□ 1.62
CMTM4-201ENST00000330687 PLCD3Q8N3E9 789 aa25.18■■□□□ 1.62
CMTM4-201ENST00000330687 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
CMTM4-201ENST00000330687 NOLC1Q14978 699 aaKnown RBP eCLIP25.18■■□□□ 1.62
CMTM4-201ENST00000330687 ZNF710Q8N1W2 664 aa25.18■■□□□ 1.62
CMTM4-201ENST00000330687 ADGBQ8N7X0 1667 aa25.17■■□□□ 1.62
CMTM4-201ENST00000330687 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
CMTM4-201ENST00000330687 SPC24Q8NBT2 197 aa25.17■■□□□ 1.62
CMTM4-201ENST00000330687 NSD3Q9BZ95 1437 aa25.16■■□□□ 1.62
CMTM4-201ENST00000330687 MCM5P33992 734 aa25.14■■□□□ 1.62
CMTM4-201ENST00000330687 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.62
CMTM4-201ENST00000330687 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
CMTM4-201ENST00000330687 NEK4P51957 841 aa25.14■■□□□ 1.61
CMTM4-201ENST00000330687 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.61
CMTM4-201ENST00000330687 DTNBO60941 627 aa25.13■■□□□ 1.61
CMTM4-201ENST00000330687 BCL2L12Q9HB09 334 aa25.13■■□□□ 1.61
CMTM4-201ENST00000330687 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
CMTM4-201ENST00000330687 ATAD2Q6PL18 1390 aa25.12■■□□□ 1.61
CMTM4-201ENST00000330687 IBTKQ9P2D0 1353 aaPredicted RBP25.12■■□□□ 1.61
CMTM4-201ENST00000330687 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 OTUD7AQ8TE49 926 aaPredicted RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 RAPGEF6Q8TEU7 1601 aa25.11■■□□□ 1.61
CMTM4-201ENST00000330687 HMGN5P82970 282 aaKnown RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 UTP14CQ5TAP6 766 aaKnown RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 NUTM2DQ5VT03 806 aaPredicted RBP25.11■■□□□ 1.61
CMTM4-201ENST00000330687 TMEM132EQ6IEE7 984 aa25.11■■□□□ 1.61
CMTM4-201ENST00000330687 POLR3AO14802 1390 aaPredicted RBP25.1■■□□□ 1.61
CMTM4-201ENST00000330687 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
CMTM4-201ENST00000330687 ZDHHC9Q9Y397 364 aa25.1■■□□□ 1.61
CMTM4-201ENST00000330687 ADCY5O95622 1261 aa25.09■■□□□ 1.61
CMTM4-201ENST00000330687 GTF2E1P29083 439 aaPredicted RBP25.09■■□□□ 1.61
CMTM4-201ENST00000330687 HCLS1P14317 486 aaPredicted RBP25.09■■□□□ 1.61
CMTM4-201ENST00000330687 GSPT1P15170 499 aaKnown RBP25.09■■□□□ 1.61
CMTM4-201ENST00000330687 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
CMTM4-201ENST00000330687 DISP1Q96F81 1524 aa25.09■■□□□ 1.61
CMTM4-201ENST00000330687 PTPRGP23470 1445 aa25.07■■□□□ 1.6
CMTM4-201ENST00000330687 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
CMTM4-201ENST00000330687 GADD45BO75293 160 aaPredicted RBP25.07■■□□□ 1.6
CMTM4-201ENST00000330687 CASC1Q6TDU7 716 aa25.07■■□□□ 1.6
CMTM4-201ENST00000330687 CHMP3Q9Y3E7 222 aa25.06■■□□□ 1.6
CMTM4-201ENST00000330687 SYAP1Q96A49 352 aaPredicted RBP25.06■■□□□ 1.6
CMTM4-201ENST00000330687 GCC1Q96CN9 775 aa25.06■■□□□ 1.6
CMTM4-201ENST00000330687 STAC3Q96MF2 364 aa25.06■■□□□ 1.6
CMTM4-201ENST00000330687 GTPBP4Q9BZE4 634 aaKnown RBP25.06■■□□□ 1.6
CMTM4-201ENST00000330687 NAP1L2Q9ULW6 460 aaPredicted RBP25.06■■□□□ 1.6
CMTM4-201ENST00000330687 MBD3O95983 291 aa25.06■■□□□ 1.6
CMTM4-201ENST00000330687 TRERF1Q96PN7 1200 aa25.05■■□□□ 1.6
CMTM4-201ENST00000330687 ADGRF5Q8IZF2 1346 aa25.04■■□□□ 1.6
CMTM4-201ENST00000330687 CWC22Q9HCG8 908 aaKnown RBP25.04■■□□□ 1.6
CMTM4-201ENST00000330687 PRIMPOLQ96LW4 560 aa25.04■■□□□ 1.6
CMTM4-201ENST00000330687 ITSN2Q9NZM3 1697 aa25.04■■□□□ 1.6
CMTM4-201ENST00000330687 INTS3Q68E01 1043 aaKnown RBP25.03■■□□□ 1.6
CMTM4-201ENST00000330687 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
CMTM4-201ENST00000330687 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
CMTM4-201ENST00000330687 RIOK3O14730 519 aaKnown RBP25.03■■□□□ 1.6
CMTM4-201ENST00000330687 LETM1O95202 739 aaPredicted RBP25.03■■□□□ 1.6
CMTM4-201ENST00000330687 USP26Q9BXU7 913 aa25.03■■□□□ 1.6
CMTM4-201ENST00000330687 PIBF1Q8WXW3 757 aa25.02■■□□□ 1.6
CMTM4-201ENST00000330687 KIF20AO95235 890 aa25.02■■□□□ 1.6
CMTM4-201ENST00000330687 TSHZ3Q63HK5 1081 aa25.02■■□□□ 1.6
CMTM4-201ENST00000330687 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
CMTM4-201ENST00000330687 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
CMTM4-201ENST00000330687 NPC1L1Q9UHC9 1359 aa25.02■■□□□ 1.6
CMTM4-201ENST00000330687 ERICH4A6NGS2 130 aa25.01■■□□□ 1.59
CMTM4-201ENST00000330687 CCDC27Q2M243 656 aa25.01■■□□□ 1.59
CMTM4-201ENST00000330687 CLEC17AQ6ZS10 378 aa25.01■■□□□ 1.59
CMTM4-201ENST00000330687 LARP6Q9BRS8 491 aaKnown RBP25.01■■□□□ 1.59
CMTM4-201ENST00000330687 UPF3BQ9BZI7 483 aaKnown RBP25.01■■□□□ 1.59
CMTM4-201ENST00000330687 ZNF592Q92610 1267 aa25.01■■□□□ 1.59
CMTM4-201ENST00000330687 SIRT2Q8IXJ6 389 aa25■■□□□ 1.59
CMTM4-201ENST00000330687 PLEKHM2Q8IWE5 1019 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms