RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
SKA2-201ENST00000330137 BAG4O95429 457 aaKnown RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
SKA2-201ENST00000330137 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 PPRC1Q5VV67 1664 aaKnown RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 KIAA2012Q0VF49 1180 aa10.37□□□□□ -0.75
SKA2-201ENST00000330137 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 MYOM1P52179 1685 aa10.37□□□□□ -0.75
SKA2-201ENST00000330137 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
SKA2-201ENST00000330137 ZSCAN23Q3MJ62 389 aa10.37□□□□□ -0.75
SKA2-201ENST00000330137 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
SKA2-201ENST00000330137 XPCQ01831 940 aaPredicted RBP10.36□□□□□ -0.75
SKA2-201ENST00000330137 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
SKA2-201ENST00000330137 FEZ1Q99689 392 aa10.36□□□□□ -0.75
SKA2-201ENST00000330137 ABCA9Q8IUA7 1624 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
SKA2-201ENST00000330137 FAM193AP78312 1265 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 BMP2KLQ5H9B9 411 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 ADGRL1O94910 1474 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 CYP2E1P05181 493 aaPredicted RBP10.35□□□□□ -0.75
SKA2-201ENST00000330137 SLC20A2Q08357 652 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 NBPF1Q3BBV0 1214 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
SKA2-201ENST00000330137 KDM5AP29375 1690 aaKnown RBP10.35□□□□□ -0.75
SKA2-201ENST00000330137 CFAP74Q9C0B2 1584 aa10.34□□□□□ -0.75
SKA2-201ENST00000330137 IQGAP3Q86VI3 1631 aa10.34□□□□□ -0.75
SKA2-201ENST00000330137 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
SKA2-201ENST00000330137 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
SKA2-201ENST00000330137 RBSNQ9H1K0 784 aa10.34□□□□□ -0.75
SKA2-201ENST00000330137 KIAA1210Q9ULL0 1709 aa10.34□□□□□ -0.75
SKA2-201ENST00000330137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
SKA2-201ENST00000330137 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 TAF7LQ5H9L4 462 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 KIF2CQ99661 725 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 LMBRD1Q9NUN5 540 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 MAST1Q9Y2H9 1570 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 MBD3O95983 291 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 SYCP1Q15431 976 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
SKA2-201ENST00000330137 PIBF1Q8WXW3 757 aa10.32□□□□□ -0.76
SKA2-201ENST00000330137 PLA2R1Q13018 1463 aa10.32□□□□□ -0.76
SKA2-201ENST00000330137 GABPB1Q06547 395 aaPredicted RBP10.32□□□□□ -0.76
SKA2-201ENST00000330137 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
SKA2-201ENST00000330137 FAM184AQ8NB25 1140 aa10.32□□□□□ -0.76
SKA2-201ENST00000330137 RUNDC1Q96C34 613 aa10.32□□□□□ -0.76
SKA2-201ENST00000330137 CHMP4BQ9H444 224 aaKnown RBP10.32□□□□□ -0.76
SKA2-201ENST00000330137 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
SKA2-201ENST00000330137 TSPY4P0CV99 314 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 TSPY10P0CW01 314 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 RLBP1P12271 317 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 NUCB1Q02818 461 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 SPTLC3Q9NUV7 552 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 SHPRHQ149N8 1683 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 SSFA2P28290 1259 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 RABEP1Q15276 862 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 PDCL2Q8N4E4 241 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 TMEM51Q9NW97 253 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
SKA2-201ENST00000330137 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 CCDC146Q8IYE0 955 aa10.31□□□□□ -0.76
SKA2-201ENST00000330137 FANCAO15360 1455 aa10.3□□□□□ -0.76
SKA2-201ENST00000330137 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
SKA2-201ENST00000330137 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
SKA2-201ENST00000330137 TPM3P06753 285 aa10.3□□□□□ -0.76
SKA2-201ENST00000330137 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
SKA2-201ENST00000330137 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
SKA2-201ENST00000330137 PRDM10Q9NQV6 1147 aa10.3□□□□□ -0.76
SKA2-201ENST00000330137 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
SKA2-201ENST00000330137 CEP152O94986 1710 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 SYAP1Q96A49 352 aaPredicted RBP10.29□□□□□ -0.76
SKA2-201ENST00000330137 PHF14O94880 888 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
SKA2-201ENST00000330137 FTSJ3Q8IY81 847 aaKnown RBP10.29□□□□□ -0.76
SKA2-201ENST00000330137 ANKRD7Q92527 254 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 DMRT2Q9Y5R5 561 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
SKA2-201ENST00000330137 OGFRQ9NZT2 677 aa10.28□□□□□ -0.76
SKA2-201ENST00000330137 USP32Q8NFA0 1604 aa10.28□□□□□ -0.76
SKA2-201ENST00000330137 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
SKA2-201ENST00000330137 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
SKA2-201ENST00000330137 SPHKAPQ2M3C7 1700 aa10.28□□□□□ -0.76
SKA2-201ENST00000330137 CCDC66A2RUB6 948 aa10.27□□□□□ -0.76
SKA2-201ENST00000330137 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.76
SKA2-201ENST00000330137 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.76
SKA2-201ENST00000330137 NEO1Q92859 1461 aa10.27□□□□□ -0.77
SKA2-201ENST00000330137 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.77
SKA2-201ENST00000330137 MCTP1Q6DN14 999 aa10.27□□□□□ -0.77
SKA2-201ENST00000330137 PLCH2O75038 1416 aa10.27□□□□□ -0.77
SKA2-201ENST00000330137 CTIFO43310 598 aaKnown RBP10.26□□□□□ -0.77
SKA2-201ENST00000330137 TSPYL1Q9H0U9 437 aa10.26□□□□□ -0.77
SKA2-201ENST00000330137 CHD1LQ86WJ1 897 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms