RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
BRCC3-201ENST00000330045 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
BRCC3-201ENST00000330045 PTPRMP28827 1452 aa19.69■□□□□ 0.74
BRCC3-201ENST00000330045 PCDHB15Q9Y5E8 787 aa19.68■□□□□ 0.74
BRCC3-201ENST00000330045 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
BRCC3-201ENST00000330045 GSE1Q14687 1217 aa19.67■□□□□ 0.74
BRCC3-201ENST00000330045 YTHDC2Q9H6S0 1430 aaKnown RBP19.66■□□□□ 0.74
BRCC3-201ENST00000330045 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
BRCC3-201ENST00000330045 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
BRCC3-201ENST00000330045 SEC24BO95487 1268 aa19.66■□□□□ 0.74
BRCC3-201ENST00000330045 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
BRCC3-201ENST00000330045 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.73
BRCC3-201ENST00000330045 RWDD1Q9H446 243 aaPredicted RBP19.64■□□□□ 0.73
BRCC3-201ENST00000330045 SRPK2P78362 688 aaKnown RBP19.63■□□□□ 0.73
BRCC3-201ENST00000330045 ANKRD26Q9UPS8 1709 aa19.62■□□□□ 0.73
BRCC3-201ENST00000330045 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
BRCC3-201ENST00000330045 PDZRN3Q9UPQ7 1066 aa19.62■□□□□ 0.73
BRCC3-201ENST00000330045 COL3A1P02461 1466 aaPredicted RBP19.62■□□□□ 0.73
BRCC3-201ENST00000330045 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
BRCC3-201ENST00000330045 METP08581 1390 aa19.62■□□□□ 0.73
BRCC3-201ENST00000330045 MVPQ14764 893 aaKnown RBP19.62■□□□□ 0.73
BRCC3-201ENST00000330045 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
BRCC3-201ENST00000330045 GGNBP2Q9H3C7 697 aa19.61■□□□□ 0.73
BRCC3-201ENST00000330045 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
BRCC3-201ENST00000330045 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
BRCC3-201ENST00000330045 POGKQ9P215 609 aa19.61■□□□□ 0.73
BRCC3-201ENST00000330045 C3P01024 1663 aa19.6■□□□□ 0.73
BRCC3-201ENST00000330045 MED14O60244 1454 aa19.6■□□□□ 0.73
BRCC3-201ENST00000330045 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
BRCC3-201ENST00000330045 UBR1Q8IWV7 1749 aa19.6■□□□□ 0.73
BRCC3-201ENST00000330045 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
BRCC3-201ENST00000330045 LTKP29376 864 aa19.6■□□□□ 0.73
BRCC3-201ENST00000330045 TSR2Q969E8 191 aaKnown RBP19.6■□□□□ 0.73
BRCC3-201ENST00000330045 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
BRCC3-201ENST00000330045 BECN1Q14457 450 aa19.59■□□□□ 0.73
BRCC3-201ENST00000330045 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
BRCC3-201ENST00000330045 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
BRCC3-201ENST00000330045 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
BRCC3-201ENST00000330045 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
BRCC3-201ENST00000330045 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.73
BRCC3-201ENST00000330045 FER1L4A9Z1Z3 1794 aa19.58■□□□□ 0.73
BRCC3-201ENST00000330045 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.73
BRCC3-201ENST00000330045 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.73
BRCC3-201ENST00000330045 NLRP1Q9C000 1473 aa19.58■□□□□ 0.72
BRCC3-201ENST00000330045 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.72
BRCC3-201ENST00000330045 EXOSC9Q06265 439 aaKnown RBP19.57■□□□□ 0.72
BRCC3-201ENST00000330045 FYB1O15117 783 aa19.57■□□□□ 0.72
BRCC3-201ENST00000330045 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
BRCC3-201ENST00000330045 TRIM35Q9UPQ4 493 aa19.57■□□□□ 0.72
BRCC3-201ENST00000330045 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
BRCC3-201ENST00000330045 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.53■□□□□ 0.72
BRCC3-201ENST00000330045 TBC1D32Q96NH3 1257 aa19.53■□□□□ 0.72
BRCC3-201ENST00000330045 IL16Q14005 1332 aa19.53■□□□□ 0.72
BRCC3-201ENST00000330045 TRIM27P14373 513 aa19.53■□□□□ 0.72
BRCC3-201ENST00000330045 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
BRCC3-201ENST00000330045 SLC26A8Q96RN1 970 aa19.52■□□□□ 0.72
BRCC3-201ENST00000330045 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
BRCC3-201ENST00000330045 RIPK4P57078 832 aa19.51■□□□□ 0.71
BRCC3-201ENST00000330045 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
BRCC3-201ENST00000330045 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
BRCC3-201ENST00000330045 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
BRCC3-201ENST00000330045 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
BRCC3-201ENST00000330045 PNPLA6Q8IY17 1366 aa19.51■□□□□ 0.71
BRCC3-201ENST00000330045 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
BRCC3-201ENST00000330045 KIF20BQ96Q89 1820 aa19.5■□□□□ 0.71
BRCC3-201ENST00000330045 ADAMTS13Q76LX8 1427 aa19.5■□□□□ 0.71
BRCC3-201ENST00000330045 HDAC1Q13547 482 aaPredicted RBP19.49■□□□□ 0.71
BRCC3-201ENST00000330045 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
BRCC3-201ENST00000330045 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
BRCC3-201ENST00000330045 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
BRCC3-201ENST00000330045 SLKQ9H2G2 1235 aaPredicted RBP19.48■□□□□ 0.71
BRCC3-201ENST00000330045 NCKAP5LQ9HCH0 1330 aa19.48■□□□□ 0.71
BRCC3-201ENST00000330045 CABP1Q9NZU7 370 aa19.47■□□□□ 0.71
BRCC3-201ENST00000330045 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
BRCC3-201ENST00000330045 RTN4Q9NQC3 1192 aaKnown RBP19.46■□□□□ 0.71
BRCC3-201ENST00000330045 BRPF3Q9ULD4 1205 aa19.46■□□□□ 0.71
BRCC3-201ENST00000330045 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
BRCC3-201ENST00000330045 TBC1D2Q9BYX2 928 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
BRCC3-201ENST00000330045 FCHSD2O94868 740 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 TMEM57Q8N5G2 664 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 KIF16BQ96L93 1317 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 DLC1Q96QB1 1528 aa19.45■□□□□ 0.7
BRCC3-201ENST00000330045 ZBTB40Q9NUA8 1239 aa19.43■□□□□ 0.7
BRCC3-201ENST00000330045 LRRC7Q96NW7 1537 aa19.43■□□□□ 0.7
BRCC3-201ENST00000330045 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
BRCC3-201ENST00000330045 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
BRCC3-201ENST00000330045 PLEKHG1Q9ULL1 1385 aa19.42■□□□□ 0.7
BRCC3-201ENST00000330045 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
BRCC3-201ENST00000330045 ATP7BP35670 1465 aa19.41■□□□□ 0.7
BRCC3-201ENST00000330045 C22orf23Q9BZE7 217 aa19.41■□□□□ 0.7
BRCC3-201ENST00000330045 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
BRCC3-201ENST00000330045 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
BRCC3-201ENST00000330045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
BRCC3-201ENST00000330045 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
BRCC3-201ENST00000330045 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
BRCC3-201ENST00000330045 PRKAR2BP31323 418 aa19.4■□□□□ 0.7
BRCC3-201ENST00000330045 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms