RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
CNOT10-201ENST00000328834 PPLO60437 1756 aa18.78■□□□□ 0.6
CNOT10-201ENST00000328834 VGFO15240 615 aaPredicted RBP18.78■□□□□ 0.6
CNOT10-201ENST00000328834 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
CNOT10-201ENST00000328834 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
CNOT10-201ENST00000328834 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
CNOT10-201ENST00000328834 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
CNOT10-201ENST00000328834 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.6
CNOT10-201ENST00000328834 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
CNOT10-201ENST00000328834 SIGLEC1Q9BZZ2 1709 aa18.76■□□□□ 0.59
CNOT10-201ENST00000328834 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
CNOT10-201ENST00000328834 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
CNOT10-201ENST00000328834 ATAD2Q6PL18 1390 aa18.75■□□□□ 0.59
CNOT10-201ENST00000328834 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
CNOT10-201ENST00000328834 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
CNOT10-201ENST00000328834 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
CNOT10-201ENST00000328834 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
CNOT10-201ENST00000328834 RBM42Q9BTD8 480 aaKnown RBP18.73■□□□□ 0.59
CNOT10-201ENST00000328834 EMILIN1Q9Y6C2 1016 aa18.73■□□□□ 0.59
CNOT10-201ENST00000328834 SETBP1Q9Y6X0 1596 aa18.73■□□□□ 0.59
CNOT10-201ENST00000328834 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
CNOT10-201ENST00000328834 ANKRD45Q5TZF3 282 aa18.72■□□□□ 0.59
CNOT10-201ENST00000328834 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
CNOT10-201ENST00000328834 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
CNOT10-201ENST00000328834 ABCC3O15438 1527 aa18.72■□□□□ 0.59
CNOT10-201ENST00000328834 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
CNOT10-201ENST00000328834 CD2BP2O95400 341 aaKnown RBP18.71■□□□□ 0.59
CNOT10-201ENST00000328834 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
CNOT10-201ENST00000328834 MCM4P33991 863 aa18.7■□□□□ 0.58
CNOT10-201ENST00000328834 MLECQ14165 292 aa18.7■□□□□ 0.58
CNOT10-201ENST00000328834 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
CNOT10-201ENST00000328834 ABCC11Q96J66 1382 aa18.69■□□□□ 0.58
CNOT10-201ENST00000328834 APBB1O00213 710 aa18.69■□□□□ 0.58
CNOT10-201ENST00000328834 XRCC6P12956 609 aaKnown RBP eCLIP18.69■□□□□ 0.58
CNOT10-201ENST00000328834 RRS1Q15050 365 aaKnown RBP18.69■□□□□ 0.58
CNOT10-201ENST00000328834 YEATS2Q9ULM3 1422 aa18.68■□□□□ 0.58
CNOT10-201ENST00000328834 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
CNOT10-201ENST00000328834 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
CNOT10-201ENST00000328834 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
CNOT10-201ENST00000328834 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 SOX12O15370 315 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
CNOT10-201ENST00000328834 HDAC1Q13547 482 aaPredicted RBP18.67■□□□□ 0.58
CNOT10-201ENST00000328834 NME9Q86XW9 330 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
CNOT10-201ENST00000328834 MYO5BQ9ULV0 1848 aa18.66■□□□□ 0.58
CNOT10-201ENST00000328834 NEURL4Q96JN8 1562 aa18.66■□□□□ 0.58
CNOT10-201ENST00000328834 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
CNOT10-201ENST00000328834 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
CNOT10-201ENST00000328834 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
CNOT10-201ENST00000328834 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
CNOT10-201ENST00000328834 TRAK2O60296 914 aa18.65■□□□□ 0.58
CNOT10-201ENST00000328834 HSCBQ8IWL3 235 aa18.65■□□□□ 0.58
CNOT10-201ENST00000328834 ADGRB2O60241 1585 aa18.64■□□□□ 0.58
CNOT10-201ENST00000328834 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.58
CNOT10-201ENST00000328834 NUCB1Q02818 461 aa18.64■□□□□ 0.57
CNOT10-201ENST00000328834 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
CNOT10-201ENST00000328834 SIRT2Q8IXJ6 389 aa18.64■□□□□ 0.57
CNOT10-201ENST00000328834 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
CNOT10-201ENST00000328834 C8orf58Q8NAV2 365 aa18.63■□□□□ 0.57
CNOT10-201ENST00000328834 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
CNOT10-201ENST00000328834 GOLGA6L3A6NEY3 463 aa18.62■□□□□ 0.57
CNOT10-201ENST00000328834 MBIPQ9NS73 344 aa18.62■□□□□ 0.57
CNOT10-201ENST00000328834 CHMP5Q9NZZ3 219 aa18.62■□□□□ 0.57
CNOT10-201ENST00000328834 NSD2O96028 1365 aa18.61■□□□□ 0.57
CNOT10-201ENST00000328834 VAMP4O75379 141 aa18.61■□□□□ 0.57
CNOT10-201ENST00000328834 ZNF692Q9BU19 519 aaPredicted RBP18.61■□□□□ 0.57
CNOT10-201ENST00000328834 PIK3C2BO00750 1634 aa18.61■□□□□ 0.57
CNOT10-201ENST00000328834 PPIP5K1Q6PFW1 1433 aa18.6■□□□□ 0.57
CNOT10-201ENST00000328834 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
CNOT10-201ENST00000328834 PTPRMP28827 1452 aa18.6■□□□□ 0.57
CNOT10-201ENST00000328834 YTHDC2Q9H6S0 1430 aaKnown RBP18.6■□□□□ 0.57
CNOT10-201ENST00000328834 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
CNOT10-201ENST00000328834 AAMPQ13685 434 aa18.6■□□□□ 0.57
CNOT10-201ENST00000328834 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
CNOT10-201ENST00000328834 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
CNOT10-201ENST00000328834 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
CNOT10-201ENST00000328834 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
CNOT10-201ENST00000328834 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
CNOT10-201ENST00000328834 USP32Q8NFA0 1604 aa18.59■□□□□ 0.57
CNOT10-201ENST00000328834 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
CNOT10-201ENST00000328834 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
CNOT10-201ENST00000328834 MRPL50Q8N5N7 158 aaKnown RBP18.59■□□□□ 0.57
CNOT10-201ENST00000328834 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
CNOT10-201ENST00000328834 KIF2CQ99661 725 aa18.59■□□□□ 0.57
CNOT10-201ENST00000328834 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.57
CNOT10-201ENST00000328834 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.57
CNOT10-201ENST00000328834 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.57
CNOT10-201ENST00000328834 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
CNOT10-201ENST00000328834 MIS18AQ9NYP9 233 aa18.56■□□□□ 0.56
CNOT10-201ENST00000328834 FCHSD2O94868 740 aa18.56■□□□□ 0.56
CNOT10-201ENST00000328834 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
CNOT10-201ENST00000328834 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
CNOT10-201ENST00000328834 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
CNOT10-201ENST00000328834 GAS2L3Q86XJ1 694 aa18.55■□□□□ 0.56
CNOT10-201ENST00000328834 CHAMP1Q96JM3 812 aa18.55■□□□□ 0.56
CNOT10-201ENST00000328834 SSFA2P28290 1259 aa18.54■□□□□ 0.56
CNOT10-201ENST00000328834 L1TD1Q5T7N2 865 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms