RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 HMMRO75330 724 aa19.97■□□□□ 0.79
SYNM-201ENST00000328642 ATF3P18847 181 aa19.97■□□□□ 0.79
SYNM-201ENST00000328642 API5Q9BZZ5 524 aaKnown RBP19.97■□□□□ 0.79
SYNM-201ENST00000328642 ACEP12821 1306 aa19.97■□□□□ 0.79
SYNM-201ENST00000328642 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
SYNM-201ENST00000328642 KRT24Q2M2I5 525 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 PHACTR3Q96KR7 559 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 FGD1P98174 961 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
SYNM-201ENST00000328642 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
SYNM-201ENST00000328642 SYTL4Q96C24 671 aaPredicted RBP19.96■□□□□ 0.79
SYNM-201ENST00000328642 F6X3S4 739 aa19.95■□□□□ 0.78
SYNM-201ENST00000328642 RLBP1P12271 317 aa19.95■□□□□ 0.78
SYNM-201ENST00000328642 GOLGA6L22H0YM25 854 aa19.94■□□□□ 0.78
SYNM-201ENST00000328642 TRIM27P14373 513 aa19.93■□□□□ 0.78
SYNM-201ENST00000328642 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
SYNM-201ENST00000328642 POLKQ9UBT6 870 aa19.93■□□□□ 0.78
SYNM-201ENST00000328642 PLCB2Q00722 1185 aa19.93■□□□□ 0.78
SYNM-201ENST00000328642 NPATQ14207 1427 aa19.93■□□□□ 0.78
SYNM-201ENST00000328642 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
SYNM-201ENST00000328642 EVA1CP58658 441 aa19.92■□□□□ 0.78
SYNM-201ENST00000328642 NPHP1O15259 732 aa19.92■□□□□ 0.78
SYNM-201ENST00000328642 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
SYNM-201ENST00000328642 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
SYNM-201ENST00000328642 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
SYNM-201ENST00000328642 STRN4Q9NRL3 753 aa19.9■□□□□ 0.78
SYNM-201ENST00000328642 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
SYNM-201ENST00000328642 ATP10AO60312 1499 aa19.89■□□□□ 0.77
SYNM-201ENST00000328642 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.77
SYNM-201ENST00000328642 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
SYNM-201ENST00000328642 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.77
SYNM-201ENST00000328642 ANXA1P04083 346 aa19.88■□□□□ 0.77
SYNM-201ENST00000328642 ZNF530Q6P9A1 599 aaPredicted RBP19.88■□□□□ 0.77
SYNM-201ENST00000328642 HDGFL1Q5TGJ6 251 aa19.88■□□□□ 0.77
SYNM-201ENST00000328642 KIAA1211Q6ZU35 1233 aa19.88■□□□□ 0.77
SYNM-201ENST00000328642 NKTRP30414 1462 aaKnown RBP19.88■□□□□ 0.77
SYNM-201ENST00000328642 MAGI2Q86UL8 1455 aa19.87■□□□□ 0.77
SYNM-201ENST00000328642 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
SYNM-201ENST00000328642 MAST1Q9Y2H9 1570 aa19.86■□□□□ 0.77
SYNM-201ENST00000328642 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
SYNM-201ENST00000328642 TNRQ92752 1358 aa19.86■□□□□ 0.77
SYNM-201ENST00000328642 RIMS2Q9UQ26 1411 aa19.85■□□□□ 0.77
SYNM-201ENST00000328642 ANKRD36BQ8N2N9 1353 aa19.85■□□□□ 0.77
SYNM-201ENST00000328642 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
SYNM-201ENST00000328642 TTC5Q8N0Z6 440 aa19.85■□□□□ 0.77
SYNM-201ENST00000328642 MBIPQ9NS73 344 aa19.85■□□□□ 0.77
SYNM-201ENST00000328642 FRAT2O75474 233 aaPredicted RBP19.84■□□□□ 0.77
SYNM-201ENST00000328642 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
SYNM-201ENST00000328642 EXOC6BQ9Y2D4 811 aa19.84■□□□□ 0.77
SYNM-201ENST00000328642 MAP4K4O95819 1239 aaPredicted RBP19.84■□□□□ 0.77
SYNM-201ENST00000328642 KCNA6P17658 529 aa19.84■□□□□ 0.77
SYNM-201ENST00000328642 GAS2L2Q8NHY3 880 aa19.84■□□□□ 0.77
SYNM-201ENST00000328642 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
SYNM-201ENST00000328642 NFKBIBQ15653 356 aa19.83■□□□□ 0.77
SYNM-201ENST00000328642 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.77
SYNM-201ENST00000328642 PHF8Q9UPP1 1060 aa19.83■□□□□ 0.77
SYNM-201ENST00000328642 MYO5CQ9NQX4 1742 aa19.83■□□□□ 0.76
SYNM-201ENST00000328642 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.76
SYNM-201ENST00000328642 MYL6BP14649 208 aa19.83■□□□□ 0.76
SYNM-201ENST00000328642 C8orf58Q8NAV2 365 aa19.83■□□□□ 0.76
SYNM-201ENST00000328642 DDX54Q8TDD1 881 aaKnown RBP19.83■□□□□ 0.76
SYNM-201ENST00000328642 IL1RAPL2Q9NP60 686 aa19.83■□□□□ 0.76
SYNM-201ENST00000328642 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
SYNM-201ENST00000328642 LTKP29376 864 aa19.82■□□□□ 0.76
SYNM-201ENST00000328642 MCCP23508 829 aa19.81■□□□□ 0.76
SYNM-201ENST00000328642 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
SYNM-201ENST00000328642 ARHGEF5Q12774 1597 aa19.81■□□□□ 0.76
SYNM-201ENST00000328642 UBTFL1P0CB47 393 aaPredicted RBP19.81■□□□□ 0.76
SYNM-201ENST00000328642 TRIM44Q96DX7 344 aaPredicted RBP19.81■□□□□ 0.76
SYNM-201ENST00000328642 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
SYNM-201ENST00000328642 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 HSPA2P54652 639 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 CHRNA2Q15822 529 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 GORABQ5T7V8 394 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
SYNM-201ENST00000328642 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
SYNM-201ENST00000328642 TAF7LQ5H9L4 462 aa19.79■□□□□ 0.76
SYNM-201ENST00000328642 FAM177BA6PVY3 158 aa19.79■□□□□ 0.76
SYNM-201ENST00000328642 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
SYNM-201ENST00000328642 TSHZ3Q63HK5 1081 aa19.78■□□□□ 0.76
SYNM-201ENST00000328642 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
SYNM-201ENST00000328642 SIL1Q9H173 461 aa19.78■□□□□ 0.76
SYNM-201ENST00000328642 CCDC30Q5VVM6 783 aa19.77■□□□□ 0.76
SYNM-201ENST00000328642 CHD1LQ86WJ1 897 aa19.77■□□□□ 0.76
SYNM-201ENST00000328642 LRRC59Q96AG4 307 aaKnown RBP19.77■□□□□ 0.76
SYNM-201ENST00000328642 BCORL1Q5H9F3 1711 aa19.76■□□□□ 0.75
SYNM-201ENST00000328642 KDM5CP41229 1560 aa19.76■□□□□ 0.75
SYNM-201ENST00000328642 PTPRTO14522 1441 aa19.76■□□□□ 0.75
SYNM-201ENST00000328642 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
SYNM-201ENST00000328642 ABCC1P33527 1531 aa19.75■□□□□ 0.75
SYNM-201ENST00000328642 NEXNQ0ZGT2 675 aa19.74■□□□□ 0.75
SYNM-201ENST00000328642 PLEKHO1Q53GL0 409 aaPredicted RBP19.74■□□□□ 0.75
SYNM-201ENST00000328642 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
SYNM-201ENST00000328642 GNAT3A8MTJ3 354 aa19.73■□□□□ 0.75
SYNM-201ENST00000328642 PTCD1O75127 700 aaKnown RBP19.73■□□□□ 0.75
SYNM-201ENST00000328642 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms