RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 SH3BP2P78314 561 aa8.27□□□□□ -1.09
SKP1-201ENST00000328392 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
SKP1-201ENST00000328392 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
SKP1-201ENST00000328392 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
SKP1-201ENST00000328392 WNT7BP56706 349 aa8.25□□□□□ -1.09
SKP1-201ENST00000328392 TMEM132AQ24JP5 1023 aa8.25□□□□□ -1.09
SKP1-201ENST00000328392 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
SKP1-201ENST00000328392 HELBQ8NG08 1087 aaPredicted RBP8.25□□□□□ -1.09
SKP1-201ENST00000328392 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
SKP1-201ENST00000328392 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
SKP1-201ENST00000328392 PCMTD1Q96MG8 357 aaPredicted RBP8.24□□□□□ -1.09
SKP1-201ENST00000328392 AP1G2O75843 785 aa8.23□□□□□ -1.09
SKP1-201ENST00000328392 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
SKP1-201ENST00000328392 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
SKP1-201ENST00000328392 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
SKP1-201ENST00000328392 TTC24A2A3L6 582 aaPredicted RBP8.22□□□□□ -1.09
SKP1-201ENST00000328392 J3QL48 77 aa8.22□□□□□ -1.09
SKP1-201ENST00000328392 DGAT1O75907 488 aa8.22□□□□□ -1.09
SKP1-201ENST00000328392 RFC5P40937 340 aa8.22□□□□□ -1.09
SKP1-201ENST00000328392 MYT1Q01538 1121 aa8.22□□□□□ -1.09
SKP1-201ENST00000328392 SIAH2O43255 324 aa8.21□□□□□ -1.1
SKP1-201ENST00000328392 SMPD1P17405 629 aa8.21□□□□□ -1.1
SKP1-201ENST00000328392 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
SKP1-201ENST00000328392 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
SKP1-201ENST00000328392 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
SKP1-201ENST00000328392 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
SKP1-201ENST00000328392 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
SKP1-201ENST00000328392 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
SKP1-201ENST00000328392 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
SKP1-201ENST00000328392 NR6A1Q15406 480 aa8.18□□□□□ -1.1
SKP1-201ENST00000328392 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SKP1-201ENST00000328392 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
SKP1-201ENST00000328392 ALDH1A1P00352 501 aa8.17□□□□□ -1.1
SKP1-201ENST00000328392 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
SKP1-201ENST00000328392 HPS1Q92902 700 aa8.16□□□□□ -1.1
SKP1-201ENST00000328392 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
SKP1-201ENST00000328392 AVPP01185 164 aa8.15□□□□□ -1.1
SKP1-201ENST00000328392 VARSP26640 1264 aaKnown RBP8.15□□□□□ -1.1
SKP1-201ENST00000328392 AGERQ15109 404 aa8.15□□□□□ -1.1
SKP1-201ENST00000328392 DACH1Q9UI36 760 aa8.15□□□□□ -1.1
SKP1-201ENST00000328392 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
SKP1-201ENST00000328392 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
SKP1-201ENST00000328392 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
SKP1-201ENST00000328392 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
SKP1-201ENST00000328392 POTECB2RU33 542 aa8.12□□□□□ -1.11
SKP1-201ENST00000328392 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
SKP1-201ENST00000328392 TRIM34Q9BYJ4 488 aa8.12□□□□□ -1.11
SKP1-201ENST00000328392 FKBPLQ9UIM3 349 aa8.12□□□□□ -1.11
SKP1-201ENST00000328392 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 NBPF14Q5TI25 921 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 WASF2Q9Y6W5 498 aa8.11□□□□□ -1.11
SKP1-201ENST00000328392 AXIN1O15169 862 aa8.1□□□□□ -1.11
SKP1-201ENST00000328392 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
SKP1-201ENST00000328392 TIMELESSQ9UNS1 1208 aa8.1□□□□□ -1.11
SKP1-201ENST00000328392 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
SKP1-201ENST00000328392 MPNDQ8N594 471 aa8.09□□□□□ -1.11
SKP1-201ENST00000328392 GJD4Q96KN9 370 aaPredicted RBP8.09□□□□□ -1.11
SKP1-201ENST00000328392 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
SKP1-201ENST00000328392 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
SKP1-201ENST00000328392 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
SKP1-201ENST00000328392 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
SKP1-201ENST00000328392 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
SKP1-201ENST00000328392 CDK15Q96Q40 435 aa8.08□□□□□ -1.12
SKP1-201ENST00000328392 GRM5P41594 1212 aa8.07□□□□□ -1.12
SKP1-201ENST00000328392 NNTQ13423 1086 aa8.07□□□□□ -1.12
SKP1-201ENST00000328392 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
SKP1-201ENST00000328392 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
SKP1-201ENST00000328392 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
SKP1-201ENST00000328392 ADH1CP00326 375 aa8.06□□□□□ -1.12
SKP1-201ENST00000328392 NR3C2P08235 984 aa8.06□□□□□ -1.12
SKP1-201ENST00000328392 MTMR14Q8NCE2 650 aa8.06□□□□□ -1.12
SKP1-201ENST00000328392 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
SKP1-201ENST00000328392 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
SKP1-201ENST00000328392 C14orf37Q86TY3 774 aa8.04□□□□□ -1.12
SKP1-201ENST00000328392 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
SKP1-201ENST00000328392 ADAM32Q8TC27 787 aa8.04□□□□□ -1.12
SKP1-201ENST00000328392 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
SKP1-201ENST00000328392 CAPN5O15484 640 aaPredicted RBP8.03□□□□□ -1.12
SKP1-201ENST00000328392 PTK2Q05397 1052 aa8.03□□□□□ -1.12
SKP1-201ENST00000328392 VASH1Q7L8A9 365 aaPredicted RBP8.03□□□□□ -1.12
SKP1-201ENST00000328392 ZBTB33Q86T24 672 aa8.03□□□□□ -1.12
SKP1-201ENST00000328392 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
SKP1-201ENST00000328392 ATP13A2Q9NQ11 1180 aa8.03□□□□□ -1.12
SKP1-201ENST00000328392 GPR37L1O60883 481 aa8.02□□□□□ -1.13
SKP1-201ENST00000328392 BMP1P13497 986 aa8.02□□□□□ -1.13
SKP1-201ENST00000328392 TIMP2P16035 220 aa8.02□□□□□ -1.13
SKP1-201ENST00000328392 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
SKP1-201ENST00000328392 FSHRP23945 695 aa8.01□□□□□ -1.13
SKP1-201ENST00000328392 NR5A1Q13285 461 aa8.01□□□□□ -1.13
SKP1-201ENST00000328392 ZFAND3Q9H8U3 227 aa8.01□□□□□ -1.13
SKP1-201ENST00000328392 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
SKP1-201ENST00000328392 MAP4K5Q9Y4K4 846 aa8.01□□□□□ -1.13
SKP1-201ENST00000328392 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
SKP1-201ENST00000328392 PNMA1Q8ND90 353 aa8□□□□□ -1.13
SKP1-201ENST00000328392 ITPKCQ96DU7 683 aa8□□□□□ -1.13
SKP1-201ENST00000328392 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms