RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 WWC1Q8IX03 1113 aa12□□□□□ -0.49
DDX53-201ENST00000327968 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
DDX53-201ENST00000327968 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
DDX53-201ENST00000327968 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
DDX53-201ENST00000327968 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
DDX53-201ENST00000327968 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
DDX53-201ENST00000327968 ZFYVE9O95405 1425 aa12□□□□□ -0.49
DDX53-201ENST00000327968 ELL2O00472 640 aaPredicted RBP11.99□□□□□ -0.49
DDX53-201ENST00000327968 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
DDX53-201ENST00000327968 RPGRIP1LQ68CZ1 1315 aa11.99□□□□□ -0.49
DDX53-201ENST00000327968 C1orf115Q9H7X2 142 aa11.99□□□□□ -0.49
DDX53-201ENST00000327968 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
DDX53-201ENST00000327968 MYO3AQ8NEV4 1616 aa11.99□□□□□ -0.49
DDX53-201ENST00000327968 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
DDX53-201ENST00000327968 RRP9O43818 475 aaKnown RBP11.98□□□□□ -0.49
DDX53-201ENST00000327968 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
DDX53-201ENST00000327968 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
DDX53-201ENST00000327968 RARSP54136 660 aaKnown RBP11.98□□□□□ -0.49
DDX53-201ENST00000327968 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
DDX53-201ENST00000327968 PDE3AQ14432 1141 aa11.96□□□□□ -0.49
DDX53-201ENST00000327968 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
DDX53-201ENST00000327968 BLMP54132 1417 aaPredicted RBP11.96□□□□□ -0.5
DDX53-201ENST00000327968 NOL8Q76FK4 1167 aaKnown RBP11.96□□□□□ -0.5
DDX53-201ENST00000327968 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.5
DDX53-201ENST00000327968 CFAP70Q5T0N1 1121 aa11.96□□□□□ -0.5
DDX53-201ENST00000327968 NASPP49321 788 aaPredicted RBP11.95□□□□□ -0.5
DDX53-201ENST00000327968 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
DDX53-201ENST00000327968 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
DDX53-201ENST00000327968 SSFA2P28290 1259 aa11.95□□□□□ -0.5
DDX53-201ENST00000327968 XPCQ01831 940 aaPredicted RBP11.95□□□□□ -0.5
DDX53-201ENST00000327968 DNTTIP2Q5QJE6 756 aaKnown RBP11.95□□□□□ -0.5
DDX53-201ENST00000327968 ANKRD45Q5TZF3 282 aa11.95□□□□□ -0.5
DDX53-201ENST00000327968 RNF214Q8ND24 703 aa11.95□□□□□ -0.5
DDX53-201ENST00000327968 DZIP1LQ8IYY4 767 aaKnown RBP11.94□□□□□ -0.5
DDX53-201ENST00000327968 GBP4Q96PP9 640 aa11.94□□□□□ -0.5
DDX53-201ENST00000327968 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
DDX53-201ENST00000327968 SLC52A1Q9NWF4 448 aa11.94□□□□□ -0.5
DDX53-201ENST00000327968 CAVIN1Q6NZI2 390 aaKnown RBP11.94□□□□□ -0.5
DDX53-201ENST00000327968 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
DDX53-201ENST00000327968 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
DDX53-201ENST00000327968 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
DDX53-201ENST00000327968 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
DDX53-201ENST00000327968 MTHFSP49914 203 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
DDX53-201ENST00000327968 ZNF521Q96K83 1311 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
DDX53-201ENST00000327968 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
DDX53-201ENST00000327968 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
DDX53-201ENST00000327968 PTMAP06454 111 aaKnown RBP11.92□□□□□ -0.5
DDX53-201ENST00000327968 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
DDX53-201ENST00000327968 MYO5BQ9ULV0 1848 aa11.91□□□□□ -0.5
DDX53-201ENST00000327968 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
DDX53-201ENST00000327968 GGT6Q6P531 493 aa11.91□□□□□ -0.5
DDX53-201ENST00000327968 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
DDX53-201ENST00000327968 ZHX1Q9UKY1 873 aaPredicted RBP11.91□□□□□ -0.5
DDX53-201ENST00000327968 C3P01024 1663 aa11.9□□□□□ -0.5
DDX53-201ENST00000327968 MVPQ14764 893 aaKnown RBP11.9□□□□□ -0.5
DDX53-201ENST00000327968 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.5
DDX53-201ENST00000327968 NOB1Q9ULX3 412 aaKnown RBP11.9□□□□□ -0.5
DDX53-201ENST00000327968 SCAF11Q99590 1463 aaKnown RBP11.9□□□□□ -0.5
DDX53-201ENST00000327968 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.51
DDX53-201ENST00000327968 ADAMTSL3P82987 1691 aa11.9□□□□□ -0.51
DDX53-201ENST00000327968 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
DDX53-201ENST00000327968 FAM177BA6PVY3 158 aa11.89□□□□□ -0.51
DDX53-201ENST00000327968 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
DDX53-201ENST00000327968 NLRP1Q9C000 1473 aa11.89□□□□□ -0.51
DDX53-201ENST00000327968 UBR1Q8IWV7 1749 aa11.89□□□□□ -0.51
DDX53-201ENST00000327968 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
DDX53-201ENST00000327968 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
DDX53-201ENST00000327968 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
DDX53-201ENST00000327968 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
DDX53-201ENST00000327968 TSC1Q92574 1164 aa11.88□□□□□ -0.51
DDX53-201ENST00000327968 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
DDX53-201ENST00000327968 TRIM27P14373 513 aa11.87□□□□□ -0.51
DDX53-201ENST00000327968 JARID2Q92833 1246 aaPredicted RBP11.87□□□□□ -0.51
DDX53-201ENST00000327968 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
DDX53-201ENST00000327968 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
DDX53-201ENST00000327968 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
DDX53-201ENST00000327968 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
DDX53-201ENST00000327968 SBNO2Q9Y2G9 1366 aa11.86□□□□□ -0.51
DDX53-201ENST00000327968 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
DDX53-201ENST00000327968 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
DDX53-201ENST00000327968 STK26Q9P289 416 aa11.86□□□□□ -0.51
DDX53-201ENST00000327968 ZMYM3Q14202 1370 aa11.86□□□□□ -0.51
DDX53-201ENST00000327968 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
DDX53-201ENST00000327968 UQCRHP07919 91 aa11.85□□□□□ -0.51
DDX53-201ENST00000327968 FBLN1P23142 703 aa11.85□□□□□ -0.51
DDX53-201ENST00000327968 KNDC1Q76NI1 1749 aa11.85□□□□□ -0.51
DDX53-201ENST00000327968 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
DDX53-201ENST00000327968 PKP1Q13835 747 aa11.85□□□□□ -0.51
DDX53-201ENST00000327968 DTNBO60941 627 aa11.84□□□□□ -0.51
DDX53-201ENST00000327968 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
DDX53-201ENST00000327968 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
DDX53-201ENST00000327968 ARHGEF28Q8N1W1 1705 aaKnown RBP11.84□□□□□ -0.51
DDX53-201ENST00000327968 GGNBP2Q9H3C7 697 aa11.84□□□□□ -0.51
DDX53-201ENST00000327968 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms