RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 TESK2Q96S53 571 aa9.42□□□□□ -0.9
CLRN1-202ENST00000327047 PROM2Q8N271 834 aa9.41□□□□□ -0.9
CLRN1-202ENST00000327047 MROH1Q8NDA8 1641 aa9.41□□□□□ -0.9
CLRN1-202ENST00000327047 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
CLRN1-202ENST00000327047 ADAMTS8Q9UP79 889 aa9.41□□□□□ -0.9
CLRN1-202ENST00000327047 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
CLRN1-202ENST00000327047 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
CLRN1-202ENST00000327047 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.9
CLRN1-202ENST00000327047 RGS12O14924 1447 aa9.4□□□□□ -0.91
CLRN1-202ENST00000327047 KIF3BO15066 747 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 YY1P25490 414 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 TRPM2O94759 1503 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 KIDINS220Q9ULH0 1771 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 ZMYM3Q14202 1370 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 PRDM15P57071 1507 aaPredicted RBP9.39□□□□□ -0.91
CLRN1-202ENST00000327047 IGHDP01880 384 aa9.39□□□□□ -0.91
CLRN1-202ENST00000327047 LAMC1P11047 1609 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 ABCC3O15438 1527 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 LRP6O75581 1613 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
CLRN1-202ENST00000327047 TET3O43151 1660 aa9.37□□□□□ -0.91
CLRN1-202ENST00000327047 FSD2A1L4K1 749 aa9.37□□□□□ -0.91
CLRN1-202ENST00000327047 CLTCL1P53675 1640 aa9.37□□□□□ -0.91
CLRN1-202ENST00000327047 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
CLRN1-202ENST00000327047 PANK3Q9H999 370 aa9.37□□□□□ -0.91
CLRN1-202ENST00000327047 EIF2AK4Q9P2K8 1649 aaKnown RBP9.36□□□□□ -0.91
CLRN1-202ENST00000327047 BCAR3O75815 825 aa9.36□□□□□ -0.91
CLRN1-202ENST00000327047 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
CLRN1-202ENST00000327047 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
CLRN1-202ENST00000327047 SPHKAPQ2M3C7 1700 aa9.35□□□□□ -0.91
CLRN1-202ENST00000327047 WDR43Q15061 677 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLRN1-202ENST00000327047 POTEHQ6S545 545 aa9.35□□□□□ -0.91
CLRN1-202ENST00000327047 MCM4P33991 863 aa9.35□□□□□ -0.91
CLRN1-202ENST00000327047 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
CLRN1-202ENST00000327047 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 UPF2Q9HAU5 1272 aaKnown RBP9.34□□□□□ -0.91
CLRN1-202ENST00000327047 LMTK2Q8IWU2 1503 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 KANK1Q14678 1352 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 ESPNB1AK53 854 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 TRAK2O60296 914 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
CLRN1-202ENST00000327047 ANKLE2Q86XL3 938 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 MYH16Q9H6N6 1097 aa9.34□□□□□ -0.91
CLRN1-202ENST00000327047 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
CLRN1-202ENST00000327047 CEP152O94986 1710 aa9.33□□□□□ -0.92
CLRN1-202ENST00000327047 CCDC146Q8IYE0 955 aa9.33□□□□□ -0.92
CLRN1-202ENST00000327047 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
CLRN1-202ENST00000327047 INSRP06213 1382 aa9.33□□□□□ -0.92
CLRN1-202ENST00000327047 EIF3AQ14152 1382 aaKnown RBP9.33□□□□□ -0.92
CLRN1-202ENST00000327047 EFCAB6Q5THR3 1501 aa9.33□□□□□ -0.92
CLRN1-202ENST00000327047 MRE11P49959 708 aa9.32□□□□□ -0.92
CLRN1-202ENST00000327047 SLFN5Q08AF3 891 aa9.32□□□□□ -0.92
CLRN1-202ENST00000327047 LMOD2Q6P5Q4 547 aa9.32□□□□□ -0.92
CLRN1-202ENST00000327047 GRPEL1Q9HAV7 217 aa9.32□□□□□ -0.92
CLRN1-202ENST00000327047 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
CLRN1-202ENST00000327047 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
CLRN1-202ENST00000327047 RBM6P78332 1123 aaKnown RBP9.31□□□□□ -0.92
CLRN1-202ENST00000327047 TRIM44Q96DX7 344 aaPredicted RBP9.31□□□□□ -0.92
CLRN1-202ENST00000327047 TBC1D32Q96NH3 1257 aa9.31□□□□□ -0.92
CLRN1-202ENST00000327047 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
CLRN1-202ENST00000327047 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
CLRN1-202ENST00000327047 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
CLRN1-202ENST00000327047 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
CLRN1-202ENST00000327047 ADGRF5Q8IZF2 1346 aa9.3□□□□□ -0.92
CLRN1-202ENST00000327047 CLUAP1Q96AJ1 413 aa9.3□□□□□ -0.92
CLRN1-202ENST00000327047 MEX3CQ5U5Q3 659 aaKnown RBP9.3□□□□□ -0.92
CLRN1-202ENST00000327047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLRN1-202ENST00000327047 PPP2R1AP30153 589 aa9.29□□□□□ -0.92
CLRN1-202ENST00000327047 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
CLRN1-202ENST00000327047 SCAF11Q99590 1463 aaKnown RBP9.29□□□□□ -0.92
CLRN1-202ENST00000327047 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
CLRN1-202ENST00000327047 TMF1P82094 1093 aa9.29□□□□□ -0.92
CLRN1-202ENST00000327047 CFAP70Q5T0N1 1121 aa9.29□□□□□ -0.92
CLRN1-202ENST00000327047 DIP2AQ14689 1571 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 APAF1O14727 1248 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 PDCL3Q9H2J4 239 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 CHMP5Q9NZZ3 219 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
CLRN1-202ENST00000327047 MYOM2P54296 1465 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 BCL9LQ86UU0 1499 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 CGNL1Q0VF96 1302 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
CLRN1-202ENST00000327047 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
CLRN1-202ENST00000327047 TPM2P07951 284 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 GGT6Q6P531 493 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 KIAA1211Q6ZU35 1233 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 TRMT2AQ8IZ69 625 aaKnown RBP9.27□□□□□ -0.93
CLRN1-202ENST00000327047 SPOCK2Q92563 424 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 KNSTRNQ9Y448 316 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 KIAA1210Q9ULL0 1709 aa9.27□□□□□ -0.93
CLRN1-202ENST00000327047 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
CLRN1-202ENST00000327047 ARHGAP23Q9P227 1491 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 NOS1P29475 1434 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 MFAP1P55081 439 aaKnown RBP9.26□□□□□ -0.93
CLRN1-202ENST00000327047 RBM10P98175 930 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms