RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
CLGN-201ENST00000325617 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
CLGN-201ENST00000325617 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
CLGN-201ENST00000325617 MLECQ14165 292 aa16.62■□□□□ 0.25
CLGN-201ENST00000325617 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
CLGN-201ENST00000325617 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
CLGN-201ENST00000325617 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
CLGN-201ENST00000325617 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
CLGN-201ENST00000325617 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
CLGN-201ENST00000325617 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
CLGN-201ENST00000325617 PANK2Q9BZ23 570 aa16.6■□□□□ 0.25
CLGN-201ENST00000325617 PPLO60437 1756 aa16.6■□□□□ 0.25
CLGN-201ENST00000325617 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
CLGN-201ENST00000325617 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
CLGN-201ENST00000325617 FRMPD1Q5SYB0 1578 aa16.59■□□□□ 0.25
CLGN-201ENST00000325617 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
CLGN-201ENST00000325617 GLI2P10070 1586 aa16.59■□□□□ 0.25
CLGN-201ENST00000325617 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
CLGN-201ENST00000325617 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
CLGN-201ENST00000325617 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
CLGN-201ENST00000325617 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
CLGN-201ENST00000325617 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
CLGN-201ENST00000325617 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
CLGN-201ENST00000325617 CAMSAP1Q5T5Y3 1602 aa16.58■□□□□ 0.24
CLGN-201ENST00000325617 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
CLGN-201ENST00000325617 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
CLGN-201ENST00000325617 SOX12O15370 315 aa16.56■□□□□ 0.24
CLGN-201ENST00000325617 APBB1O00213 710 aa16.56■□□□□ 0.24
CLGN-201ENST00000325617 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
CLGN-201ENST00000325617 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
CLGN-201ENST00000325617 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
CLGN-201ENST00000325617 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
CLGN-201ENST00000325617 PKNOX2Q96KN3 472 aa16.55■□□□□ 0.24
CLGN-201ENST00000325617 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
CLGN-201ENST00000325617 KRT24Q2M2I5 525 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 NME9Q86XW9 330 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 ABCC3O15438 1527 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
CLGN-201ENST00000325617 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
CLGN-201ENST00000325617 MYO5BQ9ULV0 1848 aa16.53■□□□□ 0.24
CLGN-201ENST00000325617 RRAGDQ9NQL2 400 aaPredicted RBP16.53■□□□□ 0.24
CLGN-201ENST00000325617 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
CLGN-201ENST00000325617 SETBP1Q9Y6X0 1596 aa16.53■□□□□ 0.24
CLGN-201ENST00000325617 MCM4P33991 863 aa16.53■□□□□ 0.24
CLGN-201ENST00000325617 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
CLGN-201ENST00000325617 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
CLGN-201ENST00000325617 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.23
CLGN-201ENST00000325617 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
CLGN-201ENST00000325617 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLGN-201ENST00000325617 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
CLGN-201ENST00000325617 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
CLGN-201ENST00000325617 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
CLGN-201ENST00000325617 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
CLGN-201ENST00000325617 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
CLGN-201ENST00000325617 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
CLGN-201ENST00000325617 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
CLGN-201ENST00000325617 LMTK2Q8IWU2 1503 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 TRAK2O60296 914 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 CD163L1Q9NR16 1453 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 VAMP4O75379 141 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 NUCB1Q02818 461 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
CLGN-201ENST00000325617 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
CLGN-201ENST00000325617 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.23
CLGN-201ENST00000325617 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
CLGN-201ENST00000325617 IPO8O15397 1037 aaKnown RBP16.46■□□□□ 0.23
CLGN-201ENST00000325617 CYB5RLQ6IPT4 315 aa16.46■□□□□ 0.23
CLGN-201ENST00000325617 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
CLGN-201ENST00000325617 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
CLGN-201ENST00000325617 YTHDC2Q9H6S0 1430 aaKnown RBP16.46■□□□□ 0.23
CLGN-201ENST00000325617 NEURL4Q96JN8 1562 aa16.46■□□□□ 0.22
CLGN-201ENST00000325617 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
CLGN-201ENST00000325617 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
CLGN-201ENST00000325617 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
CLGN-201ENST00000325617 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
CLGN-201ENST00000325617 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
CLGN-201ENST00000325617 HECW2Q9P2P5 1572 aa16.45■□□□□ 0.22
CLGN-201ENST00000325617 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 PIK3C2BO00750 1634 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 NSD2O96028 1365 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 PTPRMP28827 1452 aa16.44■□□□□ 0.22
CLGN-201ENST00000325617 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
CLGN-201ENST00000325617 FCHSD2O94868 740 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 AAMPQ13685 434 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
CLGN-201ENST00000325617 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
CLGN-201ENST00000325617 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
CLGN-201ENST00000325617 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
CLGN-201ENST00000325617 KIF2CQ99661 725 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms