RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 SMARCA5O60264 1052 aaPredicted RBP29.34■■■□□ 2.29
PACS2-201ENST00000325438 RABEP1Q15276 862 aa29.34■■■□□ 2.29
PACS2-201ENST00000325438 BMP2KLQ5H9B9 411 aa29.34■■■□□ 2.29
PACS2-201ENST00000325438 FAM177BA6PVY3 158 aa29.34■■■□□ 2.29
PACS2-201ENST00000325438 ZGPATQ8N5A5 531 aaKnown RBP29.34■■■□□ 2.29
PACS2-201ENST00000325438 RILPL2Q969X0 211 aa29.33■■■□□ 2.29
PACS2-201ENST00000325438 ZNF830Q96NB3 372 aaPredicted RBP29.33■■■□□ 2.29
PACS2-201ENST00000325438 ZBTB40Q9NUA8 1239 aa29.33■■■□□ 2.29
PACS2-201ENST00000325438 CSPP1Q1MSJ5 1256 aa29.33■■■□□ 2.29
PACS2-201ENST00000325438 EVC2Q86UK5 1308 aa29.33■■■□□ 2.29
PACS2-201ENST00000325438 C16orf71Q8IYS4 520 aaPredicted RBP29.33■■■□□ 2.29
PACS2-201ENST00000325438 KDM5DQ9BY66 1539 aa29.32■■■□□ 2.28
PACS2-201ENST00000325438 RBM25P49756 843 aaKnown RBP29.32■■■□□ 2.28
PACS2-201ENST00000325438 ITSN2Q9NZM3 1697 aa29.32■■■□□ 2.28
PACS2-201ENST00000325438 GCC1Q96CN9 775 aa29.31■■■□□ 2.28
PACS2-201ENST00000325438 INTS3Q68E01 1043 aaKnown RBP29.31■■■□□ 2.28
PACS2-201ENST00000325438 CHMP3Q9Y3E7 222 aa29.31■■■□□ 2.28
PACS2-201ENST00000325438 TSC1Q92574 1164 aa29.3■■■□□ 2.28
PACS2-201ENST00000325438 CCDC39Q9UFE4 941 aa29.3■■■□□ 2.28
PACS2-201ENST00000325438 SYNJ2O15056 1496 aa29.3■■■□□ 2.28
PACS2-201ENST00000325438 MAP7D2Q96T17 732 aa29.29■■■□□ 2.28
PACS2-201ENST00000325438 POLR3AO14802 1390 aaPredicted RBP29.29■■■□□ 2.28
PACS2-201ENST00000325438 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
PACS2-201ENST00000325438 CBX1P83916 185 aa29.27■■■□□ 2.28
PACS2-201ENST00000325438 SYAP1Q96A49 352 aaPredicted RBP29.27■■■□□ 2.28
PACS2-201ENST00000325438 ANO2Q9NQ90 1003 aa29.27■■■□□ 2.28
PACS2-201ENST00000325438 CHAF1AQ13111 956 aaPredicted RBP29.25■■■□□ 2.27
PACS2-201ENST00000325438 HDGFL2Q7Z4V5 671 aaPredicted RBP29.25■■■□□ 2.27
PACS2-201ENST00000325438 ZNF692Q9BU19 519 aaPredicted RBP29.25■■■□□ 2.27
PACS2-201ENST00000325438 SCAPERQ9BY12 1400 aa29.25■■■□□ 2.27
PACS2-201ENST00000325438 TERF2IPQ9NYB0 399 aa29.25■■■□□ 2.27
PACS2-201ENST00000325438 ADAMTS12P58397 1594 aa29.25■■■□□ 2.27
PACS2-201ENST00000325438 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
PACS2-201ENST00000325438 ADGBQ8N7X0 1667 aa29.24■■■□□ 2.27
PACS2-201ENST00000325438 DRC7Q8IY82 874 aa29.24■■■□□ 2.27
PACS2-201ENST00000325438 MCCP23508 829 aa29.23■■■□□ 2.27
PACS2-201ENST00000325438 REC8O95072 547 aa29.23■■■□□ 2.27
PACS2-201ENST00000325438 STAC3Q96MF2 364 aa29.23■■■□□ 2.27
PACS2-201ENST00000325438 CT47B1P0C2W7 299 aaPredicted RBP29.22■■■□□ 2.27
PACS2-201ENST00000325438 SYCP2Q9BX26 1530 aa29.22■■■□□ 2.27
PACS2-201ENST00000325438 TWISTNBQ3B726 338 aaPredicted RBP29.22■■■□□ 2.27
PACS2-201ENST00000325438 DCTN1Q14203 1278 aa29.22■■■□□ 2.27
PACS2-201ENST00000325438 NUP160Q12769 1436 aa29.21■■■□□ 2.27
PACS2-201ENST00000325438 ATAD2Q6PL18 1390 aa29.21■■■□□ 2.27
PACS2-201ENST00000325438 TSHZ3Q63HK5 1081 aa29.21■■■□□ 2.27
PACS2-201ENST00000325438 TSPY26PQ9H489 355 aa29.21■■■□□ 2.27
PACS2-201ENST00000325438 TSPYL6Q8N831 410 aa29.2■■■□□ 2.27
PACS2-201ENST00000325438 CCDC27Q2M243 656 aa29.19■■■□□ 2.26
PACS2-201ENST00000325438 UPF3BQ9BZI7 483 aaKnown RBP29.19■■■□□ 2.26
PACS2-201ENST00000325438 ZKSCAN5Q9Y2L8 839 aa29.19■■■□□ 2.26
PACS2-201ENST00000325438 OTUD7AQ8TE49 926 aaPredicted RBP29.19■■■□□ 2.26
PACS2-201ENST00000325438 SPC24Q8NBT2 197 aa29.18■■■□□ 2.26
PACS2-201ENST00000325438 SHANK2Q9UPX8 1470 aa29.18■■■□□ 2.26
PACS2-201ENST00000325438 C17orf53Q8N3J3 647 aaPredicted RBP29.17■■■□□ 2.26
PACS2-201ENST00000325438 USP25Q9UHP3 1055 aa29.17■■■□□ 2.26
PACS2-201ENST00000325438 NECTIN2Q92692 538 aa29.17■■■□□ 2.26
PACS2-201ENST00000325438 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
PACS2-201ENST00000325438 IGSF3O75054 1194 aa29.17■■■□□ 2.26
PACS2-201ENST00000325438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.16■■■□□ 2.26
PACS2-201ENST00000325438 PPP1R9BQ96SB3 815 aa29.16■■■□□ 2.26
PACS2-201ENST00000325438 API5Q9BZZ5 524 aaKnown RBP29.16■■■□□ 2.26
PACS2-201ENST00000325438 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
PACS2-201ENST00000325438 LARP6Q9BRS8 491 aaKnown RBP29.16■■■□□ 2.26
PACS2-201ENST00000325438 TRIM35Q9UPQ4 493 aa29.16■■■□□ 2.26
PACS2-201ENST00000325438 NLRP1Q9C000 1473 aa29.16■■■□□ 2.26
PACS2-201ENST00000325438 DTNBO60941 627 aa29.15■■■□□ 2.26
PACS2-201ENST00000325438 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
PACS2-201ENST00000325438 SASS6Q6UVJ0 657 aa29.15■■■□□ 2.26
PACS2-201ENST00000325438 CFAP44Q96MT7 982 aa29.15■■■□□ 2.26
PACS2-201ENST00000325438 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
PACS2-201ENST00000325438 SPDYE4A6NLX3 237 aa29.14■■■□□ 2.26
PACS2-201ENST00000325438 JARID2Q92833 1246 aaPredicted RBP29.14■■■□□ 2.26
PACS2-201ENST00000325438 LMBRD1Q9NUN5 540 aa29.14■■■□□ 2.26
PACS2-201ENST00000325438 NOL7Q9UMY1 257 aaKnown RBP29.14■■■□□ 2.26
PACS2-201ENST00000325438 NPC1L1Q9UHC9 1359 aa29.14■■■□□ 2.25
PACS2-201ENST00000325438 TTC12Q9H892 705 aaPredicted RBP29.13■■■□□ 2.25
PACS2-201ENST00000325438 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
PACS2-201ENST00000325438 CWC22Q9HCG8 908 aaKnown RBP29.12■■■□□ 2.25
PACS2-201ENST00000325438 MBD3O95983 291 aa29.11■■■□□ 2.25
PACS2-201ENST00000325438 GNAI1P63096 354 aa29.11■■■□□ 2.25
PACS2-201ENST00000325438 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.11■■■□□ 2.25
PACS2-201ENST00000325438 FIBPO43427 364 aa29.11■■■□□ 2.25
PACS2-201ENST00000325438 TMEM63CQ9P1W3 806 aa29.11■■■□□ 2.25
PACS2-201ENST00000325438 PHF14O94880 888 aa29.11■■■□□ 2.25
PACS2-201ENST00000325438 LRSAM1Q6UWE0 723 aa29.09■■■□□ 2.25
PACS2-201ENST00000325438 ABCC2Q92887 1545 aa29.09■■■□□ 2.25
PACS2-201ENST00000325438 FAM83GA6ND36 823 aa29.09■■■□□ 2.25
PACS2-201ENST00000325438 ZBTB7BO15156 539 aaPredicted RBP29.09■■■□□ 2.25
PACS2-201ENST00000325438 SDSP20132 328 aa29.08■■■□□ 2.25
PACS2-201ENST00000325438 MTERF4Q7Z6M4 381 aaKnown RBP29.08■■■□□ 2.25
PACS2-201ENST00000325438 NUTM2FA1L443 756 aa29.08■■■□□ 2.25
PACS2-201ENST00000325438 EIF2AK4Q9P2K8 1649 aaKnown RBP29.07■■■□□ 2.24
PACS2-201ENST00000325438 DYNC1I1O14576 645 aa29.07■■■□□ 2.24
PACS2-201ENST00000325438 KIF2CQ99661 725 aa29.07■■■□□ 2.24
PACS2-201ENST00000325438 ERC2O15083 957 aa29.07■■■□□ 2.24
PACS2-201ENST00000325438 HMMRO75330 724 aa29.07■■■□□ 2.24
PACS2-201ENST00000325438 GPT2Q8TD30 523 aa29.07■■■□□ 2.24
PACS2-201ENST00000325438 NSFL1CQ9UNZ2 370 aaKnown RBP29.06■■■□□ 2.24
PACS2-201ENST00000325438 ZNF592Q92610 1267 aa29.06■■■□□ 2.24
PACS2-201ENST00000325438 CABP1Q9NZU7 370 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms