RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 TMEM132EQ6IEE7 984 aa20.13■□□□□ 0.81
PCBP4-201ENST00000322099 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
PCBP4-201ENST00000322099 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
PCBP4-201ENST00000322099 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
PCBP4-201ENST00000322099 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
PCBP4-201ENST00000322099 IL16Q14005 1332 aa20.12■□□□□ 0.81
PCBP4-201ENST00000322099 MED14O60244 1454 aa20.12■□□□□ 0.81
PCBP4-201ENST00000322099 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
PCBP4-201ENST00000322099 ANTXR1Q9H6X2 564 aa20.11■□□□□ 0.81
PCBP4-201ENST00000322099 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
PCBP4-201ENST00000322099 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
PCBP4-201ENST00000322099 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
PCBP4-201ENST00000322099 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
PCBP4-201ENST00000322099 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.8
PCBP4-201ENST00000322099 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
PCBP4-201ENST00000322099 PLEKHF1Q96S99 279 aa20.07■□□□□ 0.8
PCBP4-201ENST00000322099 DDX19BQ9UMR2 479 aa20.07■□□□□ 0.8
PCBP4-201ENST00000322099 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
PCBP4-201ENST00000322099 ATAD2Q6PL18 1390 aa20.07■□□□□ 0.8
PCBP4-201ENST00000322099 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
PCBP4-201ENST00000322099 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
PCBP4-201ENST00000322099 TNRQ92752 1358 aa20.05■□□□□ 0.8
PCBP4-201ENST00000322099 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
PCBP4-201ENST00000322099 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
PCBP4-201ENST00000322099 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
PCBP4-201ENST00000322099 TBC1D2Q9BYX2 928 aa20.04■□□□□ 0.8
PCBP4-201ENST00000322099 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
PCBP4-201ENST00000322099 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
PCBP4-201ENST00000322099 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
PCBP4-201ENST00000322099 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
PCBP4-201ENST00000322099 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.8
PCBP4-201ENST00000322099 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
PCBP4-201ENST00000322099 TERF2IPQ9NYB0 399 aa20.02■□□□□ 0.8
PCBP4-201ENST00000322099 KIF16BQ96L93 1317 aa20.02■□□□□ 0.79
PCBP4-201ENST00000322099 TRIM27P14373 513 aa20.01■□□□□ 0.79
PCBP4-201ENST00000322099 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
PCBP4-201ENST00000322099 SLKQ9H2G2 1235 aaPredicted RBP20.01■□□□□ 0.79
PCBP4-201ENST00000322099 TRIM35Q9UPQ4 493 aa20.01■□□□□ 0.79
PCBP4-201ENST00000322099 EXOSC9Q06265 439 aaKnown RBP20.01■□□□□ 0.79
PCBP4-201ENST00000322099 SMC5Q8IY18 1101 aa20.01■□□□□ 0.79
PCBP4-201ENST00000322099 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
PCBP4-201ENST00000322099 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
PCBP4-201ENST00000322099 IPO8O15397 1037 aaKnown RBP20■□□□□ 0.79
PCBP4-201ENST00000322099 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
PCBP4-201ENST00000322099 ZNF428Q96B54 188 aa19.99■□□□□ 0.79
PCBP4-201ENST00000322099 ALDH1L2Q3SY69 923 aa19.99■□□□□ 0.79
PCBP4-201ENST00000322099 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
PCBP4-201ENST00000322099 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
PCBP4-201ENST00000322099 PTPRMP28827 1452 aa19.98■□□□□ 0.79
PCBP4-201ENST00000322099 POGKQ9P215 609 aa19.98■□□□□ 0.79
PCBP4-201ENST00000322099 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
PCBP4-201ENST00000322099 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
PCBP4-201ENST00000322099 ALKQ9UM73 1620 aa19.97■□□□□ 0.79
PCBP4-201ENST00000322099 BRPF1P55201 1214 aaPredicted RBP19.97■□□□□ 0.79
PCBP4-201ENST00000322099 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
PCBP4-201ENST00000322099 ITPRIPQ8IWB1 547 aa19.96■□□□□ 0.79
PCBP4-201ENST00000322099 ZBTB40Q9NUA8 1239 aa19.96■□□□□ 0.79
PCBP4-201ENST00000322099 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
PCBP4-201ENST00000322099 FYB1O15117 783 aa19.95■□□□□ 0.78
PCBP4-201ENST00000322099 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
PCBP4-201ENST00000322099 CHMP5Q9NZZ3 219 aa19.95■□□□□ 0.78
PCBP4-201ENST00000322099 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCBP4-201ENST00000322099 CHMP4BQ9H444 224 aaKnown RBP19.95■□□□□ 0.78
PCBP4-201ENST00000322099 STK26Q9P289 416 aa19.95■□□□□ 0.78
PCBP4-201ENST00000322099 PPIP5K1Q6PFW1 1433 aa19.95■□□□□ 0.78
PCBP4-201ENST00000322099 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
PCBP4-201ENST00000322099 DIAPH1O60610 1272 aaKnown RBP19.94■□□□□ 0.78
PCBP4-201ENST00000322099 NOB1Q9ULX3 412 aaKnown RBP19.94■□□□□ 0.78
PCBP4-201ENST00000322099 C3P01024 1663 aa19.94■□□□□ 0.78
PCBP4-201ENST00000322099 RIPK4P57078 832 aa19.94■□□□□ 0.78
PCBP4-201ENST00000322099 GGNBP2Q9H3C7 697 aa19.94■□□□□ 0.78
PCBP4-201ENST00000322099 FCHSD2O94868 740 aa19.93■□□□□ 0.78
PCBP4-201ENST00000322099 HDGFL2Q7Z4V5 671 aaPredicted RBP19.93■□□□□ 0.78
PCBP4-201ENST00000322099 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
PCBP4-201ENST00000322099 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
PCBP4-201ENST00000322099 UBR1Q8IWV7 1749 aa19.92■□□□□ 0.78
PCBP4-201ENST00000322099 MCM4P33991 863 aa19.92■□□□□ 0.78
PCBP4-201ENST00000322099 NUCB1Q02818 461 aa19.92■□□□□ 0.78
PCBP4-201ENST00000322099 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
PCBP4-201ENST00000322099 HDGFP51858 240 aaKnown RBP19.9■□□□□ 0.78
PCBP4-201ENST00000322099 MFAP1P55081 439 aaKnown RBP19.9■□□□□ 0.78
PCBP4-201ENST00000322099 RBM25P49756 843 aaKnown RBP19.9■□□□□ 0.78
PCBP4-201ENST00000322099 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
PCBP4-201ENST00000322099 HSCBQ8IWL3 235 aa19.9■□□□□ 0.78
PCBP4-201ENST00000322099 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.77
PCBP4-201ENST00000322099 SNX21Q969T3 373 aa19.89■□□□□ 0.77
PCBP4-201ENST00000322099 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.77
PCBP4-201ENST00000322099 KIF20BQ96Q89 1820 aa19.89■□□□□ 0.77
PCBP4-201ENST00000322099 SAFB2Q14151 953 aaKnown RBP eCLIP19.88■□□□□ 0.77
PCBP4-201ENST00000322099 ARHGAP45Q92619 1136 aa19.88■□□□□ 0.77
PCBP4-201ENST00000322099 NRXN3Q9Y4C0 1643 aa19.88■□□□□ 0.77
PCBP4-201ENST00000322099 FAM135BQ49AJ0 1406 aa19.88■□□□□ 0.77
PCBP4-201ENST00000322099 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
PCBP4-201ENST00000322099 SETD1AO15047 1707 aaKnown RBP19.87■□□□□ 0.77
PCBP4-201ENST00000322099 FSD2A1L4K1 749 aa19.86■□□□□ 0.77
PCBP4-201ENST00000322099 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
PCBP4-201ENST00000322099 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
PCBP4-201ENST00000322099 ATP7BP35670 1465 aa19.85■□□□□ 0.77
PCBP4-201ENST00000322099 GOLGA6L3A6NEY3 463 aa19.85■□□□□ 0.77
PCBP4-201ENST00000322099 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms