RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 HDGFP51858 240 aaKnown RBP15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 POLR1AO95602 1720 aaPredicted RBP15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
DNMT3A-202ENST00000321117 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
DNMT3A-202ENST00000321117 NOS1P29475 1434 aa15.62■□□□□ 0.09
DNMT3A-202ENST00000321117 FCHSD2O94868 740 aa15.61■□□□□ 0.09
DNMT3A-202ENST00000321117 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
DNMT3A-202ENST00000321117 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
DNMT3A-202ENST00000321117 R3HCC1Q9Y3T6 440 aaKnown RBP15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 PLCH2O75038 1416 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 CLCN1P35523 988 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 ANO2Q9NQ90 1003 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 ARHGEF5Q12774 1597 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 RRP9O43818 475 aaKnown RBP15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 BMP2KLQ5H9B9 411 aa15.6■□□□□ 0.09
DNMT3A-202ENST00000321117 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 C14orf93Q9H972 538 aaKnown RBP15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 KDM5DQ9BY66 1539 aa15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 UBE2Q2Q8WVN8 375 aa15.59■□□□□ 0.09
DNMT3A-202ENST00000321117 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.09
DNMT3A-202ENST00000321117 TRAPPC8Q9Y2L5 1435 aa15.58■□□□□ 0.08
DNMT3A-202ENST00000321117 NSD2O96028 1365 aa15.58■□□□□ 0.08
DNMT3A-202ENST00000321117 DRC7Q8IY82 874 aa15.58■□□□□ 0.08
DNMT3A-202ENST00000321117 RNF214Q8ND24 703 aa15.58■□□□□ 0.08
DNMT3A-202ENST00000321117 RRAGDQ9NQL2 400 aaPredicted RBP15.58■□□□□ 0.08
DNMT3A-202ENST00000321117 SSFA2P28290 1259 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 CWC22Q9HCG8 908 aaKnown RBP15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 NEK4P51957 841 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 NUCB1Q02818 461 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 NFE2L2Q16236 605 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 CDK19Q9BWU1 502 aa15.57■□□□□ 0.08
DNMT3A-202ENST00000321117 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 MBD3O95983 291 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 ZSCAN30Q86W11 494 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 SMC5Q8IY18 1101 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 MAST1Q9Y2H9 1570 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 IL16Q14005 1332 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 TBC1D9Q6ZT07 1266 aa15.56■□□□□ 0.08
DNMT3A-202ENST00000321117 FGD1P98174 961 aa15.55■□□□□ 0.08
DNMT3A-202ENST00000321117 PRDM15P57071 1507 aaPredicted RBP15.55■□□□□ 0.08
DNMT3A-202ENST00000321117 SNX21Q969T3 373 aa15.54■□□□□ 0.08
DNMT3A-202ENST00000321117 CCDC39Q9UFE4 941 aa15.54■□□□□ 0.08
DNMT3A-202ENST00000321117 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
DNMT3A-202ENST00000321117 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
DNMT3A-202ENST00000321117 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
DNMT3A-202ENST00000321117 AMPHP49418 695 aa15.53■□□□□ 0.08
DNMT3A-202ENST00000321117 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
DNMT3A-202ENST00000321117 ERC2O15083 957 aa15.53■□□□□ 0.08
DNMT3A-202ENST00000321117 SLC52A1Q9NWF4 448 aa15.52■□□□□ 0.08
DNMT3A-202ENST00000321117 FKBP5Q13451 457 aaPredicted RBP15.52■□□□□ 0.08
DNMT3A-202ENST00000321117 MCM2P49736 904 aa15.52■□□□□ 0.07
DNMT3A-202ENST00000321117 ANKRD36BQ8N2N9 1353 aa15.52■□□□□ 0.07
DNMT3A-202ENST00000321117 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
DNMT3A-202ENST00000321117 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
DNMT3A-202ENST00000321117 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
DNMT3A-202ENST00000321117 FANCAO15360 1455 aa15.5■□□□□ 0.07
DNMT3A-202ENST00000321117 KLHL40Q2TBA0 621 aa15.49■□□□□ 0.07
DNMT3A-202ENST00000321117 SAMD9LQ8IVG5 1584 aa15.49■□□□□ 0.07
DNMT3A-202ENST00000321117 ABCA8O94911 1581 aa15.49■□□□□ 0.07
DNMT3A-202ENST00000321117 PKNOX2Q96KN3 472 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 SYNMO15061 1565 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 RAB3GAP1Q15042 981 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 GPATCH3Q96I76 525 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 TSPY26PQ9H489 355 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 USP19O94966 1318 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 CHMP4AQ9BY43 222 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 ZMYM3Q14202 1370 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 NAP1L2Q9ULW6 460 aaPredicted RBP15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
DNMT3A-202ENST00000321117 RBM25P49756 843 aaKnown RBP15.47■□□□□ 0.07
DNMT3A-202ENST00000321117 SULT6B1Q6IMI4 303 aa15.47■□□□□ 0.07
DNMT3A-202ENST00000321117 ANTXR1Q9H6X2 564 aa15.47■□□□□ 0.07
DNMT3A-202ENST00000321117 CROCC2H7BZ55 1655 aa15.47■□□□□ 0.07
DNMT3A-202ENST00000321117 FYB1O15117 783 aa15.47■□□□□ 0.07
DNMT3A-202ENST00000321117 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 LTV1Q96GA3 475 aaPredicted RBP15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 MTERF4Q7Z6M4 381 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 SMC3Q9UQE7 1217 aa15.46■□□□□ 0.07
DNMT3A-202ENST00000321117 KDM5AP29375 1690 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms