RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
LRRC42-201ENST00000319223 USP6P35125 1406 aa23.27■■□□□ 1.32
LRRC42-201ENST00000319223 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
LRRC42-201ENST00000319223 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
LRRC42-201ENST00000319223 CPSF1Q10570 1443 aaKnown RBP23.26■■□□□ 1.31
LRRC42-201ENST00000319223 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
LRRC42-201ENST00000319223 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
LRRC42-201ENST00000319223 AKAP12Q02952 1782 aa23.24■■□□□ 1.31
LRRC42-201ENST00000319223 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
LRRC42-201ENST00000319223 ABTB2Q8N961 1025 aa23.22■■□□□ 1.31
LRRC42-201ENST00000319223 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
LRRC42-201ENST00000319223 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
LRRC42-201ENST00000319223 POTEAQ6S8J7 498 aa23.2■■□□□ 1.3
LRRC42-201ENST00000319223 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
LRRC42-201ENST00000319223 AFF2P51816 1311 aa23.2■■□□□ 1.3
LRRC42-201ENST00000319223 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
LRRC42-201ENST00000319223 NGLY1Q96IV0 654 aa23.19■■□□□ 1.3
LRRC42-201ENST00000319223 TTC21BQ7Z4L5 1316 aa23.19■■□□□ 1.3
LRRC42-201ENST00000319223 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
LRRC42-201ENST00000319223 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
LRRC42-201ENST00000319223 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
LRRC42-201ENST00000319223 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
LRRC42-201ENST00000319223 CDCA8Q53HL2 280 aa23.18■■□□□ 1.3
LRRC42-201ENST00000319223 MON2Q7Z3U7 1717 aa23.17■■□□□ 1.3
LRRC42-201ENST00000319223 MARF1Q9Y4F3 1742 aaKnown RBP23.17■■□□□ 1.3
LRRC42-201ENST00000319223 NRKQ7Z2Y5 1582 aa23.17■■□□□ 1.3
LRRC42-201ENST00000319223 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
LRRC42-201ENST00000319223 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
LRRC42-201ENST00000319223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRRC42-201ENST00000319223 TERF2IPQ9NYB0 399 aa23.16■■□□□ 1.3
LRRC42-201ENST00000319223 PIK3C2AO00443 1686 aa23.15■■□□□ 1.3
LRRC42-201ENST00000319223 NLRP6P59044 892 aa23.14■■□□□ 1.3
LRRC42-201ENST00000319223 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.3
LRRC42-201ENST00000319223 POLR3GLQ9BT43 218 aa23.14■■□□□ 1.3
LRRC42-201ENST00000319223 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
LRRC42-201ENST00000319223 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
LRRC42-201ENST00000319223 ZRANB1Q9UGI0 708 aa23.13■■□□□ 1.29
LRRC42-201ENST00000319223 USP19O94966 1318 aa23.13■■□□□ 1.29
LRRC42-201ENST00000319223 PHRF1Q9P1Y6 1649 aaKnown RBP23.13■■□□□ 1.29
LRRC42-201ENST00000319223 MYOM1P52179 1685 aa23.12■■□□□ 1.29
LRRC42-201ENST00000319223 TTC21AQ8NDW8 1320 aa23.12■■□□□ 1.29
LRRC42-201ENST00000319223 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
LRRC42-201ENST00000319223 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
LRRC42-201ENST00000319223 NME9Q86XW9 330 aa23.11■■□□□ 1.29
LRRC42-201ENST00000319223 USP21Q9UK80 565 aa23.11■■□□□ 1.29
LRRC42-201ENST00000319223 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
LRRC42-201ENST00000319223 ZC3H6P61129 1189 aaKnown RBP23.1■■□□□ 1.29
LRRC42-201ENST00000319223 BCL9LQ86UU0 1499 aa23.1■■□□□ 1.29
LRRC42-201ENST00000319223 GCP02774 474 aa23.09■■□□□ 1.29
LRRC42-201ENST00000319223 SLIT2O94813 1529 aa23.09■■□□□ 1.29
LRRC42-201ENST00000319223 KIAA0232Q92628 1395 aa23.08■■□□□ 1.28
LRRC42-201ENST00000319223 CARD14Q9BXL6 1004 aa23.08■■□□□ 1.28
LRRC42-201ENST00000319223 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.28
LRRC42-201ENST00000319223 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
LRRC42-201ENST00000319223 SLIT3O75094 1523 aa23.06■■□□□ 1.28
LRRC42-201ENST00000319223 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
LRRC42-201ENST00000319223 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
LRRC42-201ENST00000319223 PLCH1Q4KWH8 1693 aa23.05■■□□□ 1.28
LRRC42-201ENST00000319223 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
LRRC42-201ENST00000319223 SOX12O15370 315 aa23.04■■□□□ 1.28
LRRC42-201ENST00000319223 UNC5CLQ8IV45 518 aa23.03■■□□□ 1.28
LRRC42-201ENST00000319223 BTG4Q9NY30 223 aa23.03■■□□□ 1.28
LRRC42-201ENST00000319223 COL14A1Q05707 1796 aaKnown RBP23.02■■□□□ 1.28
LRRC42-201ENST00000319223 ATRNO75882 1429 aa23.02■■□□□ 1.28
LRRC42-201ENST00000319223 TRPC5Q9UL62 973 aaPredicted RBP23.02■■□□□ 1.28
LRRC42-201ENST00000319223 CPDO75976 1380 aa23.01■■□□□ 1.27
LRRC42-201ENST00000319223 RXRBP28702 533 aa23■■□□□ 1.27
LRRC42-201ENST00000319223 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 FYB1O15117 783 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 USP54Q70EL1 1684 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
LRRC42-201ENST00000319223 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.98■■□□□ 1.27
LRRC42-201ENST00000319223 PANK3Q9H999 370 aa22.98■■□□□ 1.27
LRRC42-201ENST00000319223 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
LRRC42-201ENST00000319223 NFAT5O94916 1531 aa22.98■■□□□ 1.27
LRRC42-201ENST00000319223 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
LRRC42-201ENST00000319223 KCNH5Q8NCM2 988 aa22.97■■□□□ 1.27
LRRC42-201ENST00000319223 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
LRRC42-201ENST00000319223 ARHGEF25Q86VW2 580 aa22.96■■□□□ 1.27
LRRC42-201ENST00000319223 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
LRRC42-201ENST00000319223 WASHC2AQ641Q2 1341 aa22.96■■□□□ 1.27
LRRC42-201ENST00000319223 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
LRRC42-201ENST00000319223 FBLN1P23142 703 aa22.95■■□□□ 1.26
LRRC42-201ENST00000319223 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
LRRC42-201ENST00000319223 CCDC7Q96M83 1385 aa22.95■■□□□ 1.26
LRRC42-201ENST00000319223 VPS72Q15906 364 aa22.94■■□□□ 1.26
LRRC42-201ENST00000319223 COG3Q96JB2 828 aa22.94■■□□□ 1.26
LRRC42-201ENST00000319223 AXIN2Q9Y2T1 843 aa22.94■■□□□ 1.26
LRRC42-201ENST00000319223 STRN4Q9NRL3 753 aa22.93■■□□□ 1.26
LRRC42-201ENST00000319223 AATKQ6ZMQ8 1374 aa22.93■■□□□ 1.26
LRRC42-201ENST00000319223 COL18A1P39060 1754 aa22.93■■□□□ 1.26
LRRC42-201ENST00000319223 GLI3P10071 1580 aa22.92■■□□□ 1.26
LRRC42-201ENST00000319223 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
LRRC42-201ENST00000319223 KIF20BQ96Q89 1820 aa22.9■■□□□ 1.26
LRRC42-201ENST00000319223 RGS12O14924 1447 aa22.9■■□□□ 1.26
LRRC42-201ENST00000319223 EVA1CP58658 441 aa22.88■■□□□ 1.25
LRRC42-201ENST00000319223 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms