RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
CRAT-201ENST00000318080 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
CRAT-201ENST00000318080 TBC1D32Q96NH3 1257 aa20.37■□□□□ 0.85
CRAT-201ENST00000318080 VIRMAQ69YN4 1812 aaKnown RBP20.36■□□□□ 0.85
CRAT-201ENST00000318080 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
CRAT-201ENST00000318080 MTHFSP49914 203 aa20.35■□□□□ 0.85
CRAT-201ENST00000318080 PMFBP1Q8TBY8 1022 aa20.34■□□□□ 0.85
CRAT-201ENST00000318080 RIMS1Q86UR5 1692 aaKnown RBP20.34■□□□□ 0.85
CRAT-201ENST00000318080 RPGRIP1LQ68CZ1 1315 aa20.34■□□□□ 0.85
CRAT-201ENST00000318080 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
CRAT-201ENST00000318080 HSP90AA1P07900 732 aaKnown RBP20.34■□□□□ 0.85
CRAT-201ENST00000318080 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
CRAT-201ENST00000318080 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
CRAT-201ENST00000318080 ERBB4Q15303 1308 aa20.33■□□□□ 0.84
CRAT-201ENST00000318080 A0A0U1RQG5 324 aaPredicted RBP20.33■□□□□ 0.84
CRAT-201ENST00000318080 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
CRAT-201ENST00000318080 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
CRAT-201ENST00000318080 MCM4P33991 863 aa20.31■□□□□ 0.84
CRAT-201ENST00000318080 TSR2Q969E8 191 aaKnown RBP20.31■□□□□ 0.84
CRAT-201ENST00000318080 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
CRAT-201ENST00000318080 RIMS2Q9UQ26 1411 aa20.3■□□□□ 0.84
CRAT-201ENST00000318080 STK26Q9P289 416 aa20.3■□□□□ 0.84
CRAT-201ENST00000318080 UPF2Q9HAU5 1272 aaKnown RBP20.3■□□□□ 0.84
CRAT-201ENST00000318080 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
CRAT-201ENST00000318080 FSD2A1L4K1 749 aa20.29■□□□□ 0.84
CRAT-201ENST00000318080 TRAK2O60296 914 aa20.28■□□□□ 0.84
CRAT-201ENST00000318080 CLCN1P35523 988 aa20.28■□□□□ 0.84
CRAT-201ENST00000318080 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
CRAT-201ENST00000318080 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
CRAT-201ENST00000318080 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
CRAT-201ENST00000318080 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
CRAT-201ENST00000318080 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.83
CRAT-201ENST00000318080 LTKP29376 864 aa20.27■□□□□ 0.83
CRAT-201ENST00000318080 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.83
CRAT-201ENST00000318080 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.83
CRAT-201ENST00000318080 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
CRAT-201ENST00000318080 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
CRAT-201ENST00000318080 ADAMTSL3P82987 1691 aa20.25■□□□□ 0.83
CRAT-201ENST00000318080 ZFYVE9O95405 1425 aa20.25■□□□□ 0.83
CRAT-201ENST00000318080 UBR1Q8IWV7 1749 aa20.25■□□□□ 0.83
CRAT-201ENST00000318080 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
CRAT-201ENST00000318080 DZIP1LQ8IYY4 767 aaKnown RBP20.23■□□□□ 0.83
CRAT-201ENST00000318080 C22orf23Q9BZE7 217 aa20.23■□□□□ 0.83
CRAT-201ENST00000318080 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
CRAT-201ENST00000318080 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
CRAT-201ENST00000318080 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
CRAT-201ENST00000318080 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
CRAT-201ENST00000318080 PTPRMP28827 1452 aa20.21■□□□□ 0.83
CRAT-201ENST00000318080 TRIM27P14373 513 aa20.21■□□□□ 0.83
CRAT-201ENST00000318080 GAS2L3Q86XJ1 694 aa20.21■□□□□ 0.83
CRAT-201ENST00000318080 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
CRAT-201ENST00000318080 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
CRAT-201ENST00000318080 SBNO2Q9Y2G9 1366 aa20.2■□□□□ 0.82
CRAT-201ENST00000318080 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
CRAT-201ENST00000318080 GRPEL1Q9HAV7 217 aa20.2■□□□□ 0.82
CRAT-201ENST00000318080 ESPNB1AK53 854 aa20.19■□□□□ 0.82
CRAT-201ENST00000318080 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
CRAT-201ENST00000318080 ALKQ9UM73 1620 aa20.19■□□□□ 0.82
CRAT-201ENST00000318080 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
CRAT-201ENST00000318080 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
CRAT-201ENST00000318080 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
CRAT-201ENST00000318080 AAMPQ13685 434 aa20.18■□□□□ 0.82
CRAT-201ENST00000318080 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
CRAT-201ENST00000318080 CABP2Q9NPB3 220 aa20.18■□□□□ 0.82
CRAT-201ENST00000318080 MYO3AQ8NEV4 1616 aa20.18■□□□□ 0.82
CRAT-201ENST00000318080 U2SURPO15042 1029 aaKnown RBP20.17■□□□□ 0.82
CRAT-201ENST00000318080 RRP9O43818 475 aaKnown RBP20.17■□□□□ 0.82
CRAT-201ENST00000318080 METP08581 1390 aa20.17■□□□□ 0.82
CRAT-201ENST00000318080 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
CRAT-201ENST00000318080 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
CRAT-201ENST00000318080 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
CRAT-201ENST00000318080 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
CRAT-201ENST00000318080 MRE11P49959 708 aa20.14■□□□□ 0.82
CRAT-201ENST00000318080 RBM10P98175 930 aaKnown RBP20.14■□□□□ 0.82
CRAT-201ENST00000318080 ARID3AQ99856 593 aa20.14■□□□□ 0.82
CRAT-201ENST00000318080 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
CRAT-201ENST00000318080 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.81
CRAT-201ENST00000318080 CHMP5Q9NZZ3 219 aa20.14■□□□□ 0.81
CRAT-201ENST00000318080 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
CRAT-201ENST00000318080 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
CRAT-201ENST00000318080 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
CRAT-201ENST00000318080 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.12■□□□□ 0.81
CRAT-201ENST00000318080 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
CRAT-201ENST00000318080 TMPOP42166 694 aaKnown RBP20.12■□□□□ 0.81
CRAT-201ENST00000318080 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
CRAT-201ENST00000318080 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
CRAT-201ENST00000318080 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
CRAT-201ENST00000318080 MINK1Q8N4C8 1332 aaPredicted RBP20.11■□□□□ 0.81
CRAT-201ENST00000318080 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
CRAT-201ENST00000318080 QRICH2Q9H0J4 1663 aa20.11■□□□□ 0.81
CRAT-201ENST00000318080 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
CRAT-201ENST00000318080 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
CRAT-201ENST00000318080 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
CRAT-201ENST00000318080 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
CRAT-201ENST00000318080 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
CRAT-201ENST00000318080 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
CRAT-201ENST00000318080 SMC5Q8IY18 1101 aa20.09■□□□□ 0.81
CRAT-201ENST00000318080 ADAMTS13Q76LX8 1427 aa20.09■□□□□ 0.81
CRAT-201ENST00000318080 DDX19BQ9UMR2 479 aa20.08■□□□□ 0.81
CRAT-201ENST00000318080 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms