RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 CCDC61Q9Y6R9 512 aa37.26■■■■□ 3.56
TUBB6-201ENST00000317702 EDC4Q6P2E9 1401 aaKnown RBP37.25■■■■□ 3.55
TUBB6-201ENST00000317702 SPINK5Q9NQ38 1064 aaPredicted RBP37.24■■■■□ 3.55
TUBB6-201ENST00000317702 DIP2AQ14689 1571 aa37.23■■■■□ 3.55
TUBB6-201ENST00000317702 E9PSI1 815 aa37.22■■■■□ 3.55
TUBB6-201ENST00000317702 AMOTL2Q9Y2J4 779 aa37.22■■■■□ 3.55
TUBB6-201ENST00000317702 NKTRP30414 1462 aaKnown RBP37.22■■■■□ 3.55
TUBB6-201ENST00000317702 C20orf194Q5TEA3 1177 aa37.21■■■■□ 3.55
TUBB6-201ENST00000317702 DMRT2Q9Y5R5 561 aa37.21■■■■□ 3.55
TUBB6-201ENST00000317702 MON2Q7Z3U7 1717 aa37.2■■■■□ 3.55
TUBB6-201ENST00000317702 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.19■■■■□ 3.54
TUBB6-201ENST00000317702 U2AF1L5P0DN76 240 aaPredicted RBP37.19■■■■□ 3.54
TUBB6-201ENST00000317702 U2AF1Q01081 240 aaKnown RBP eCLIP37.19■■■■□ 3.54
TUBB6-201ENST00000317702 ADAMTSL3P82987 1691 aa37.18■■■■□ 3.54
TUBB6-201ENST00000317702 TCP11L2Q8N4U5 519 aa37.18■■■■□ 3.54
TUBB6-201ENST00000317702 AKAP12Q02952 1782 aa37.18■■■■□ 3.54
TUBB6-201ENST00000317702 PTCH1Q13635 1447 aa37.18■■■■□ 3.54
TUBB6-201ENST00000317702 WWC1Q8IX03 1113 aa37.17■■■■□ 3.54
TUBB6-201ENST00000317702 NME9Q86XW9 330 aa37.15■■■■□ 3.54
TUBB6-201ENST00000317702 RRP7AQ9Y3A4 280 aaKnown RBP37.15■■■■□ 3.54
TUBB6-201ENST00000317702 PNPLA6Q8IY17 1366 aa37.15■■■■□ 3.54
TUBB6-201ENST00000317702 TOPAZ1Q8N9V7 1692 aa37.15■■■■□ 3.54
TUBB6-201ENST00000317702 ITSN1Q15811 1721 aa37.15■■■■□ 3.54
TUBB6-201ENST00000317702 TCERG1O14776 1098 aaKnown RBP37.14■■■■□ 3.54
TUBB6-201ENST00000317702 NEUROD2Q15784 382 aa37.11■■■■□ 3.53
TUBB6-201ENST00000317702 PHF23Q9BUL5 403 aaPredicted RBP37.11■■■■□ 3.53
TUBB6-201ENST00000317702 XRN1Q8IZH2 1706 aaKnown RBP37.11■■■■□ 3.53
TUBB6-201ENST00000317702 FBLN1P23142 703 aa37.11■■■■□ 3.53
TUBB6-201ENST00000317702 ZRANB1Q9UGI0 708 aa37.1■■■■□ 3.53
TUBB6-201ENST00000317702 U2SURPO15042 1029 aaKnown RBP37.09■■■■□ 3.53
TUBB6-201ENST00000317702 POLKQ9UBT6 870 aa37.09■■■■□ 3.53
TUBB6-201ENST00000317702 ZNF692Q9BU19 519 aaPredicted RBP37.08■■■■□ 3.53
TUBB6-201ENST00000317702 ZNF142P52746 1687 aaPredicted RBP37.08■■■■□ 3.53
TUBB6-201ENST00000317702 NUTM2FA1L443 756 aa37.07■■■■□ 3.52
TUBB6-201ENST00000317702 DIAPH1O60610 1272 aaKnown RBP37.06■■■■□ 3.52
TUBB6-201ENST00000317702 PLEKHG3A1L390 1219 aa37.05■■■■□ 3.52
TUBB6-201ENST00000317702 PLEKHF1Q96S99 279 aa37.05■■■■□ 3.52
TUBB6-201ENST00000317702 CCDC27Q2M243 656 aa37.04■■■■□ 3.52
TUBB6-201ENST00000317702 NRKQ7Z2Y5 1582 aa37.03■■■■□ 3.52
TUBB6-201ENST00000317702 ACEP12821 1306 aa37.02■■■■□ 3.52
TUBB6-201ENST00000317702 MS4A1P11836 297 aa37.01■■■■□ 3.52
TUBB6-201ENST00000317702 NCBP3Q53F19 620 aaKnown RBP37.01■■■■□ 3.52
TUBB6-201ENST00000317702 ERICH6Q7L0X2 663 aa37.01■■■■□ 3.52
TUBB6-201ENST00000317702 PIK3R4Q99570 1358 aa37■■■■□ 3.51
TUBB6-201ENST00000317702 COG3Q96JB2 828 aa37■■■■□ 3.51
TUBB6-201ENST00000317702 AATKQ6ZMQ8 1374 aa37■■■■□ 3.51
TUBB6-201ENST00000317702 MAP2P11137 1827 aaKnown RBP36.99■■■■□ 3.51
TUBB6-201ENST00000317702 WDR63Q8IWG1 891 aa36.99■■■■□ 3.51
TUBB6-201ENST00000317702 PPM1GO15355 546 aaPredicted RBP36.98■■■■□ 3.51
TUBB6-201ENST00000317702 BCAR3O75815 825 aa36.98■■■■□ 3.51
TUBB6-201ENST00000317702 KCNA6P17658 529 aa36.98■■■■□ 3.51
TUBB6-201ENST00000317702 EMILIN1Q9Y6C2 1016 aa36.98■■■■□ 3.51
TUBB6-201ENST00000317702 KDM2BQ8NHM5 1336 aa36.97■■■■□ 3.51
TUBB6-201ENST00000317702 TTC21BQ7Z4L5 1316 aa36.97■■■■□ 3.51
TUBB6-201ENST00000317702 ANKLE2Q86XL3 938 aa36.97■■■■□ 3.51
TUBB6-201ENST00000317702 USP6P35125 1406 aa36.96■■■■□ 3.51
TUBB6-201ENST00000317702 CDK12Q9NYV4 1490 aaPredicted RBP36.94■■■■□ 3.5
TUBB6-201ENST00000317702 ANP32AP39687 249 aaKnown RBP36.94■■■■□ 3.5
TUBB6-201ENST00000317702 CENPQQ7L2Z9 268 aaPredicted RBP36.92■■■■□ 3.5
TUBB6-201ENST00000317702 MAPK8IP3Q9UPT6 1336 aa36.91■■■■□ 3.5
TUBB6-201ENST00000317702 TMPOP42166 694 aaKnown RBP36.9■■■■□ 3.5
TUBB6-201ENST00000317702 PDE4AP27815 886 aa36.9■■■■□ 3.5
TUBB6-201ENST00000317702 LRRC7Q96NW7 1537 aa36.89■■■■□ 3.5
TUBB6-201ENST00000317702 SSH2Q76I76 1423 aa36.89■■■■□ 3.5
TUBB6-201ENST00000317702 RRS1Q15050 365 aaKnown RBP36.88■■■■□ 3.49
TUBB6-201ENST00000317702 OVOS2A0A0J9YW53 1432 aa36.87■■■■□ 3.49
TUBB6-201ENST00000317702 OVOS2Q6IE36 1432 aa36.87■■■■□ 3.49
TUBB6-201ENST00000317702 PMFBP1Q8TBY8 1022 aa36.86■■■■□ 3.49
TUBB6-201ENST00000317702 BACH2Q9BYV9 841 aa36.86■■■■□ 3.49
TUBB6-201ENST00000317702 FCHSD2O94868 740 aa36.86■■■■□ 3.49
TUBB6-201ENST00000317702 IL13P35225 146 aa36.86■■■■□ 3.49
TUBB6-201ENST00000317702 SETD1BQ9UPS6 1966 aaKnown RBP36.86■■■■□ 3.49
TUBB6-201ENST00000317702 RGPD8O14715 1765 aaPredicted RBP36.85■■■■□ 3.49
TUBB6-201ENST00000317702 PDE3AQ14432 1141 aa36.85■■■■□ 3.49
TUBB6-201ENST00000317702 RSPH6AQ9H0K4 717 aa36.85■■■■□ 3.49
TUBB6-201ENST00000317702 PNNQ9H307 717 aaKnown RBP36.85■■■■□ 3.49
TUBB6-201ENST00000317702 TRIM35Q9UPQ4 493 aa36.85■■■■□ 3.49
TUBB6-201ENST00000317702 CHD2O14647 1828 aaKnown RBP36.84■■■■□ 3.49
TUBB6-201ENST00000317702 ANKARQ7Z5J8 1434 aa36.82■■■■□ 3.48
TUBB6-201ENST00000317702 IPO9Q96P70 1041 aaKnown RBP36.82■■■■□ 3.48
TUBB6-201ENST00000317702 NOP58Q9Y2X3 529 aaKnown RBP36.82■■■■□ 3.48
TUBB6-201ENST00000317702 SKAP1Q86WV1 359 aa36.81■■■■□ 3.48
TUBB6-201ENST00000317702 FMN2Q9NZ56 1722 aa36.81■■■■□ 3.48
TUBB6-201ENST00000317702 PRKAR2BP31323 418 aa36.8■■■■□ 3.48
TUBB6-201ENST00000317702 NALCNQ8IZF0 1738 aa36.79■■■■□ 3.48
TUBB6-201ENST00000317702 MYH16Q9H6N6 1097 aa36.79■■■■□ 3.48
TUBB6-201ENST00000317702 RARSP54136 660 aaKnown RBP36.78■■■■□ 3.48
TUBB6-201ENST00000317702 CANXP27824 592 aaKnown RBP36.78■■■■□ 3.48
TUBB6-201ENST00000317702 RIPK4P57078 832 aa36.78■■■■□ 3.48
TUBB6-201ENST00000317702 HMOX1P09601 288 aa36.77■■■■□ 3.48
TUBB6-201ENST00000317702 NGDNQ8NEJ9 315 aaKnown RBP36.77■■■■□ 3.48
TUBB6-201ENST00000317702 TTC21AQ8NDW8 1320 aa36.76■■■■□ 3.48
TUBB6-201ENST00000317702 USP31Q70CQ4 1352 aa36.76■■■■□ 3.47
TUBB6-201ENST00000317702 NPHP4O75161 1426 aaPredicted RBP36.75■■■■□ 3.47
TUBB6-201ENST00000317702 PHACTR3Q96KR7 559 aa36.71■■■■□ 3.47
TUBB6-201ENST00000317702 TSR2Q969E8 191 aaKnown RBP36.7■■■■□ 3.46
TUBB6-201ENST00000317702 IL16Q14005 1332 aa36.69■■■■□ 3.46
TUBB6-201ENST00000317702 PANK1Q8TE04 598 aa36.69■■■■□ 3.46
TUBB6-201ENST00000317702 PEAK1Q9H792 1746 aa36.69■■■■□ 3.46
TUBB6-201ENST00000317702 FRAT1Q92837 279 aaPredicted RBP36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms