RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 NSD3Q9BZ95 1437 aa16.43■□□□□ 0.22
PROM2-201ENST00000317620 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
PROM2-201ENST00000317620 BICD2Q8TD16 824 aa16.42■□□□□ 0.22
PROM2-201ENST00000317620 FSD1Q9BTV5 496 aa16.42■□□□□ 0.22
PROM2-201ENST00000317620 WWC1Q8IX03 1113 aa16.42■□□□□ 0.22
PROM2-201ENST00000317620 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
PROM2-201ENST00000317620 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
PROM2-201ENST00000317620 SMG6Q86US8 1419 aaKnown RBP16.41■□□□□ 0.22
PROM2-201ENST00000317620 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
PROM2-201ENST00000317620 NFXL1Q6ZNB6 911 aa16.41■□□□□ 0.22
PROM2-201ENST00000317620 RAD21O60216 631 aa16.41■□□□□ 0.22
PROM2-201ENST00000317620 TPD52L1Q16890 204 aaPredicted RBP16.41■□□□□ 0.22
PROM2-201ENST00000317620 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
PROM2-201ENST00000317620 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
PROM2-201ENST00000317620 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
PROM2-201ENST00000317620 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
PROM2-201ENST00000317620 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
PROM2-201ENST00000317620 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
PROM2-201ENST00000317620 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
PROM2-201ENST00000317620 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
PROM2-201ENST00000317620 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.39■□□□□ 0.21
PROM2-201ENST00000317620 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
PROM2-201ENST00000317620 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
PROM2-201ENST00000317620 CUL7Q14999 1698 aa16.39■□□□□ 0.21
PROM2-201ENST00000317620 NEK4P51957 841 aa16.39■□□□□ 0.21
PROM2-201ENST00000317620 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PROM2-201ENST00000317620 IDI1Q13907 227 aa16.38■□□□□ 0.21
PROM2-201ENST00000317620 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
PROM2-201ENST00000317620 FOSBP53539 338 aa16.38■□□□□ 0.21
PROM2-201ENST00000317620 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
PROM2-201ENST00000317620 XPCQ01831 940 aaPredicted RBP16.38■□□□□ 0.21
PROM2-201ENST00000317620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
PROM2-201ENST00000317620 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
PROM2-201ENST00000317620 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
PROM2-201ENST00000317620 ERICH2A1L162 156 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
PROM2-201ENST00000317620 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 TPM3P06753 285 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 DDX54Q8TDD1 881 aaKnown RBP16.37■□□□□ 0.21
PROM2-201ENST00000317620 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
PROM2-201ENST00000317620 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
PROM2-201ENST00000317620 FBXO31Q5XUX0 539 aaPredicted RBP16.36■□□□□ 0.21
PROM2-201ENST00000317620 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
PROM2-201ENST00000317620 DNAJC2Q99543 621 aaKnown RBP16.36■□□□□ 0.21
PROM2-201ENST00000317620 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
PROM2-201ENST00000317620 FBXW7Q969H0 707 aa16.36■□□□□ 0.21
PROM2-201ENST00000317620 CABP4P57796 275 aa16.35■□□□□ 0.21
PROM2-201ENST00000317620 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
PROM2-201ENST00000317620 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
PROM2-201ENST00000317620 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PROM2-201ENST00000317620 PSMA5P28066 241 aa16.34■□□□□ 0.21
PROM2-201ENST00000317620 CCDC27Q2M243 656 aa16.34■□□□□ 0.21
PROM2-201ENST00000317620 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
PROM2-201ENST00000317620 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
PROM2-201ENST00000317620 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
PROM2-201ENST00000317620 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 FYB1O15117 783 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 TSR1Q2NL82 804 aaKnown RBP16.33■□□□□ 0.2
PROM2-201ENST00000317620 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 MYL6BP14649 208 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 RABEP1Q15276 862 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
PROM2-201ENST00000317620 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
PROM2-201ENST00000317620 SIL1Q9H173 461 aa16.32■□□□□ 0.2
PROM2-201ENST00000317620 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.32■□□□□ 0.2
PROM2-201ENST00000317620 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
PROM2-201ENST00000317620 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
PROM2-201ENST00000317620 NME9Q86XW9 330 aa16.32■□□□□ 0.2
PROM2-201ENST00000317620 CHD1LQ86WJ1 897 aa16.31■□□□□ 0.2
PROM2-201ENST00000317620 TMEM57Q8N5G2 664 aa16.31■□□□□ 0.2
PROM2-201ENST00000317620 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
PROM2-201ENST00000317620 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
PROM2-201ENST00000317620 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
PROM2-201ENST00000317620 KIF14Q15058 1648 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 MCM10Q7L590 875 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 TPM1P09493 284 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
PROM2-201ENST00000317620 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 HIP1O00291 1037 aa16.3■□□□□ 0.2
PROM2-201ENST00000317620 MCM2P49736 904 aa16.29■□□□□ 0.2
PROM2-201ENST00000317620 PDE4CQ08493 712 aa16.29■□□□□ 0.2
PROM2-201ENST00000317620 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
PROM2-201ENST00000317620 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
PROM2-201ENST00000317620 CNNM1Q9NRU3 951 aa16.28■□□□□ 0.2
PROM2-201ENST00000317620 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
PROM2-201ENST00000317620 TRAK2O60296 914 aa16.28■□□□□ 0.2
PROM2-201ENST00000317620 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
PROM2-201ENST00000317620 CEBPAP49715 358 aaPredicted RBP16.28■□□□□ 0.2
PROM2-201ENST00000317620 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
PROM2-201ENST00000317620 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
PROM2-201ENST00000317620 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
PROM2-201ENST00000317620 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
PROM2-201ENST00000317620 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.19
PROM2-201ENST00000317620 KCNH5Q8NCM2 988 aa16.27■□□□□ 0.19
PROM2-201ENST00000317620 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
PROM2-201ENST00000317620 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms