RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ITPRIPQ8IWB1 547 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 ABCC11Q96J66 1382 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 KCNJ4P48050 445 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 MFAP1P55081 439 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 KLHL40Q2TBA0 621 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 CCDC191Q8NCU4 936 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 UTRNP46939 3433 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 SRRTQ9BXP5 876 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 RBM28Q9NW13 759 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 WDR33Q9C0J8 1336 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 TRIP11Q15643 1979 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 KDM5DQ9BY66 1539 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 LRPPRCP42704 1394 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 FGD1P98174 961 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 API5Q9BZZ5 524 aaKnown RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 ARID1BQ8NFD5 2236 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 PKD2Q13563 968 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 AEBP1Q8IUX7 1158 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 TERF2IPQ9NYB0 399 aa5.41□□□□□ -1.54
CNOT1-201ENST00000317147 AMER1Q5JTC6 1135 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-201ENST00000317147 TOPBP1Q92547 1522 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 PLCB2Q00722 1185 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 PNISRQ8TF01 805 aaKnown RBP5.4□□□□□ -1.54
CNOT1-201ENST00000317147 NOL10Q9BSC4 688 aaKnown RBP5.4□□□□□ -1.54
CNOT1-201ENST00000317147 UHRF1BP1Q6BDS2 1440 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 SH3BGRP55822 239 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-201ENST00000317147 DNAJC5BQ9UF47 199 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 NSD2O96028 1365 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 ZKSCAN1P17029 563 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-201ENST00000317147 TACO1Q9BSH4 297 aaKnown RBP5.4□□□□□ -1.54
CNOT1-201ENST00000317147 SMC4Q9NTJ3 1288 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 NCOR1O75376 2440 aa5.4□□□□□ -1.54
CNOT1-201ENST00000317147 PDE4CQ08493 712 aa5.4□□□□□ -1.55
CNOT1-201ENST00000317147 DZIP1LQ8IYY4 767 aaKnown RBP5.4□□□□□ -1.55
CNOT1-201ENST00000317147 SENP3Q9H4L4 574 aaPredicted RBP5.4□□□□□ -1.55
CNOT1-201ENST00000317147 HIP1O00291 1037 aa5.4□□□□□ -1.55
CNOT1-201ENST00000317147 OFD1O75665 1012 aa5.4□□□□□ -1.55
CNOT1-201ENST00000317147 HSP90AB4PQ58FF6 505 aa5.4□□□□□ -1.55
CNOT1-201ENST00000317147 CEP290O15078 2479 aa5.4□□□□□ -1.55
CNOT1-201ENST00000317147 SPAG17Q6Q759 2223 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 SSR1P43307 286 aaKnown RBP5.39□□□□□ -1.55
CNOT1-201ENST00000317147 WDR63Q8IWG1 891 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 FANCD2Q9BXW9 1451 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 RNF123Q5XPI4 1314 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 MAP9Q49MG5 647 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 FILIP1Q7Z7B0 1213 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 LUZP1Q86V48 1076 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 USP25Q9UHP3 1055 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 CLGNO14967 610 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 GSDMDP57764 484 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 NAIPQ13075 1403 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 ASCC3Q8N3C0 2202 aaKnown RBP5.39□□□□□ -1.55
CNOT1-201ENST00000317147 K7ELQ4 463 aaPredicted RBP5.39□□□□□ -1.55
CNOT1-201ENST00000317147 ANKRD1Q15327 319 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 ZRSR2Q15696 482 aaKnown RBP5.39□□□□□ -1.55
CNOT1-201ENST00000317147 DNAAF4Q8WXU2 420 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 KRT222Q8N1A0 295 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 SNX21Q969T3 373 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 SRCIN1Q9C0H9 1055 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 TTC3P53804 2025 aa5.39□□□□□ -1.55
CNOT1-201ENST00000317147 TTLL5Q6EMB2 1281 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 RUFY1Q96T51 708 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 BCL2L13Q9BXK5 485 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
CNOT1-201ENST00000317147 IFT57Q9NWB7 429 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 SHANK2Q9UPX8 1470 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC171Q6TFL3 1326 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 GOLGA6L10A0A0M3HER8 536 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 CBFA2T2O43439 604 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 KIAA0754O94854 1291 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 RUNDC1Q96C34 613 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 MICALCLQ6ZW33 695 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 KDM5AP29375 1690 aaKnown RBP5.38□□□□□ -1.55
CNOT1-201ENST00000317147 PSMA5P28066 241 aa5.38□□□□□ -1.55
CNOT1-201ENST00000317147 HDGFP51858 240 aaKnown RBP5.38□□□□□ -1.55
CNOT1-201ENST00000317147 IRX3P78415 501 aaPredicted RBP5.38□□□□□ -1.55
CNOT1-201ENST00000317147 CTAGE5O15320 804 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 KIF18AQ8NI77 898 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 POGKQ9P215 609 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 ANKRD50Q9ULJ7 1429 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 IQGAP2Q13576 1575 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 CACNA1CQ13936 2221 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 DNMT1P26358 1616 aaKnown RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 AEBP2Q6ZN18 517 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 NOC3LQ8WTT2 800 aaKnown RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 GNL2Q13823 731 aaKnown RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 FOXD4L1Q9NU39 408 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 KIF1BO60333 1816 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 PLEKHG5O94827 1062 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 CHGAP10645 457 aaKnown RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC73Q6ZRK6 1079 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 LUC7LQ9NQ29 371 aaKnown RBP5.37□□□□□ -1.55
CNOT1-201ENST00000317147 EVPLQ92817 2033 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 DLG5Q8TDM6 1919 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 BCORL1Q5H9F3 1711 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 ANKRD30BQ9BXX2 1392 aa5.37□□□□□ -1.55
CNOT1-201ENST00000317147 ZSCAN12O43309 604 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms