RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
CLK4-201ENST00000316308 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
CLK4-201ENST00000316308 SETD1AO15047 1707 aaKnown RBP19.13■□□□□ 0.65
CLK4-201ENST00000316308 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 C8orf34Q49A92 452 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 NME9Q86XW9 330 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
CLK4-201ENST00000316308 CCDC27Q2M243 656 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
CLK4-201ENST00000316308 NINLQ9Y2I6 1382 aa19.1■□□□□ 0.65
CLK4-201ENST00000316308 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
CLK4-201ENST00000316308 PCDHB15Q9Y5E8 787 aa19.1■□□□□ 0.65
CLK4-201ENST00000316308 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
CLK4-201ENST00000316308 PDE3AQ14432 1141 aa19.1■□□□□ 0.65
CLK4-201ENST00000316308 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
CLK4-201ENST00000316308 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
CLK4-201ENST00000316308 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
CLK4-201ENST00000316308 HMOX1P09601 288 aa19.09■□□□□ 0.65
CLK4-201ENST00000316308 SLC4A3P48751 1232 aa19.08■□□□□ 0.65
CLK4-201ENST00000316308 ESF1Q9H501 851 aaKnown RBP19.08■□□□□ 0.65
CLK4-201ENST00000316308 RIPK4P57078 832 aa19.08■□□□□ 0.64
CLK4-201ENST00000316308 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
CLK4-201ENST00000316308 WASLO00401 505 aaPredicted RBP19.07■□□□□ 0.64
CLK4-201ENST00000316308 PHACTR3Q96KR7 559 aa19.07■□□□□ 0.64
CLK4-201ENST00000316308 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
CLK4-201ENST00000316308 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
CLK4-201ENST00000316308 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
CLK4-201ENST00000316308 PNPLA6Q8IY17 1366 aa19.05■□□□□ 0.64
CLK4-201ENST00000316308 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
CLK4-201ENST00000316308 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
CLK4-201ENST00000316308 PPIP5K1Q6PFW1 1433 aa19.05■□□□□ 0.64
CLK4-201ENST00000316308 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
CLK4-201ENST00000316308 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
CLK4-201ENST00000316308 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
CLK4-201ENST00000316308 PRR36Q9H6K5 1346 aa19.04■□□□□ 0.64
CLK4-201ENST00000316308 LTKP29376 864 aa19.04■□□□□ 0.64
CLK4-201ENST00000316308 SSH1Q8WYL5 1049 aa19.03■□□□□ 0.64
CLK4-201ENST00000316308 KIF20BQ96Q89 1820 aa19.03■□□□□ 0.64
CLK4-201ENST00000316308 MED14O60244 1454 aa19.02■□□□□ 0.64
CLK4-201ENST00000316308 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
CLK4-201ENST00000316308 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
CLK4-201ENST00000316308 CPS1P31327 1500 aa19.02■□□□□ 0.64
CLK4-201ENST00000316308 DLC1Q96QB1 1528 aa19.02■□□□□ 0.64
CLK4-201ENST00000316308 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
CLK4-201ENST00000316308 SEC24BO95487 1268 aa19.01■□□□□ 0.63
CLK4-201ENST00000316308 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
CLK4-201ENST00000316308 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
CLK4-201ENST00000316308 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
CLK4-201ENST00000316308 SMC4Q9NTJ3 1288 aa19■□□□□ 0.63
CLK4-201ENST00000316308 TNRQ92752 1358 aa19■□□□□ 0.63
CLK4-201ENST00000316308 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
CLK4-201ENST00000316308 TRIM27P14373 513 aa18.99■□□□□ 0.63
CLK4-201ENST00000316308 ATP7BP35670 1465 aa18.97■□□□□ 0.63
CLK4-201ENST00000316308 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
CLK4-201ENST00000316308 TMEM2Q9UHN6 1383 aa18.97■□□□□ 0.63
CLK4-201ENST00000316308 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLK4-201ENST00000316308 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
CLK4-201ENST00000316308 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
CLK4-201ENST00000316308 IL13P35225 146 aa18.96■□□□□ 0.63
CLK4-201ENST00000316308 ZKSCAN2Q63HK3 967 aa18.96■□□□□ 0.63
CLK4-201ENST00000316308 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
CLK4-201ENST00000316308 FCHSD2O94868 740 aa18.95■□□□□ 0.62
CLK4-201ENST00000316308 MVPQ14764 893 aaKnown RBP18.95■□□□□ 0.62
CLK4-201ENST00000316308 SOX12O15370 315 aa18.95■□□□□ 0.62
CLK4-201ENST00000316308 DZIP1LQ8IYY4 767 aaKnown RBP18.95■□□□□ 0.62
CLK4-201ENST00000316308 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
CLK4-201ENST00000316308 FTSJ3Q8IY81 847 aaKnown RBP18.94■□□□□ 0.62
CLK4-201ENST00000316308 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
CLK4-201ENST00000316308 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
CLK4-201ENST00000316308 FAM135BQ49AJ0 1406 aa18.94■□□□□ 0.62
CLK4-201ENST00000316308 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
CLK4-201ENST00000316308 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
CLK4-201ENST00000316308 UBR1Q8IWV7 1749 aa18.93■□□□□ 0.62
CLK4-201ENST00000316308 USP19O94966 1318 aa18.92■□□□□ 0.62
CLK4-201ENST00000316308 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
CLK4-201ENST00000316308 AEBP1Q8IUX7 1158 aa18.92■□□□□ 0.62
CLK4-201ENST00000316308 ITPRIPQ8IWB1 547 aa18.92■□□□□ 0.62
CLK4-201ENST00000316308 TMEM57Q8N5G2 664 aa18.92■□□□□ 0.62
CLK4-201ENST00000316308 COG3Q96JB2 828 aa18.91■□□□□ 0.62
CLK4-201ENST00000316308 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.91■□□□□ 0.62
CLK4-201ENST00000316308 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
CLK4-201ENST00000316308 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
CLK4-201ENST00000316308 TECPR2O15040 1411 aa18.89■□□□□ 0.61
CLK4-201ENST00000316308 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
CLK4-201ENST00000316308 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.61
CLK4-201ENST00000316308 ACEP12821 1306 aa18.89■□□□□ 0.61
CLK4-201ENST00000316308 DEKP35659 375 aaKnown RBP18.88■□□□□ 0.61
CLK4-201ENST00000316308 PMFBP1Q8TBY8 1022 aa18.88■□□□□ 0.61
CLK4-201ENST00000316308 IL16Q14005 1332 aa18.87■□□□□ 0.61
CLK4-201ENST00000316308 MBIPQ9NS73 344 aa18.86■□□□□ 0.61
CLK4-201ENST00000316308 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
CLK4-201ENST00000316308 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
CLK4-201ENST00000316308 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
CLK4-201ENST00000316308 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CLK4-201ENST00000316308 VAMP4O75379 141 aa18.85■□□□□ 0.61
CLK4-201ENST00000316308 KRT24Q2M2I5 525 aa18.85■□□□□ 0.61
CLK4-201ENST00000316308 C3P01024 1663 aa18.84■□□□□ 0.61
CLK4-201ENST00000316308 CT47B1P0C2W7 299 aaPredicted RBP18.84■□□□□ 0.61
CLK4-201ENST00000316308 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms