RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 AMER1Q5JTC6 1135 aaPredicted RBP37.25■■■■□ 3.55
CGREF1-202ENST00000312734 CGNL1Q0VF96 1302 aa37.25■■■■□ 3.55
CGREF1-202ENST00000312734 ROBO1Q9Y6N7 1651 aa37.22■■■■□ 3.55
CGREF1-202ENST00000312734 SSH2Q76I76 1423 aa37.21■■■■□ 3.55
CGREF1-202ENST00000312734 FYB1O15117 783 aa37.21■■■■□ 3.55
CGREF1-202ENST00000312734 NME9Q86XW9 330 aa37.21■■■■□ 3.55
CGREF1-202ENST00000312734 GGNBP2Q9H3C7 697 aa37.19■■■■□ 3.54
CGREF1-202ENST00000312734 NRKQ7Z2Y5 1582 aa37.17■■■■□ 3.54
CGREF1-202ENST00000312734 ANP32CO43423 234 aa37.17■■■■□ 3.54
CGREF1-202ENST00000312734 ZRANB1Q9UGI0 708 aa37.17■■■■□ 3.54
CGREF1-202ENST00000312734 TTC21AQ8NDW8 1320 aa37.16■■■■□ 3.54
CGREF1-202ENST00000312734 LMOD2Q6P5Q4 547 aa37.14■■■■□ 3.54
CGREF1-202ENST00000312734 ABTB2Q8N961 1025 aa37.14■■■■□ 3.54
CGREF1-202ENST00000312734 BRD4O60885 1362 aaPredicted RBP37.14■■■■□ 3.54
CGREF1-202ENST00000312734 NUTM2GQ5VZR2 741 aa37.14■■■■□ 3.54
CGREF1-202ENST00000312734 PXDNQ92626 1479 aa37.13■■■■□ 3.53
CGREF1-202ENST00000312734 NPC1L1Q9UHC9 1359 aa37.12■■■■□ 3.53
CGREF1-202ENST00000312734 SOS2Q07890 1332 aaPredicted RBP37.12■■■■□ 3.53
CGREF1-202ENST00000312734 PRKRIP1Q9H875 184 aaPredicted RBP37.1■■■■□ 3.53
CGREF1-202ENST00000312734 NHSL1Q5SYE7 1610 aa37.09■■■■□ 3.53
CGREF1-202ENST00000312734 MORC1Q86VD1 984 aa37.09■■■■□ 3.53
CGREF1-202ENST00000312734 NLRP6P59044 892 aa37.08■■■■□ 3.53
CGREF1-202ENST00000312734 SBNO1A3KN83 1393 aa37.08■■■■□ 3.53
CGREF1-202ENST00000312734 NSD2O96028 1365 aa37.08■■■■□ 3.53
CGREF1-202ENST00000312734 TRPM3Q9HCF6 1732 aaPredicted RBP37.08■■■■□ 3.53
CGREF1-202ENST00000312734 COG3Q96JB2 828 aa37.07■■■■□ 3.53
CGREF1-202ENST00000312734 KIF20BQ96Q89 1820 aa37.07■■■■□ 3.52
CGREF1-202ENST00000312734 PLEKHG5O94827 1062 aa37.05■■■■□ 3.52
CGREF1-202ENST00000312734 TNNT2P45379 298 aaPredicted RBP37.05■■■■□ 3.52
CGREF1-202ENST00000312734 SPATA31A3Q5VYP0 1347 aa37.04■■■■□ 3.52
CGREF1-202ENST00000312734 PIK3C2AO00443 1686 aa37.03■■■■□ 3.52
CGREF1-202ENST00000312734 MIER1Q8N108 512 aa37.03■■■■□ 3.52
CGREF1-202ENST00000312734 AHDC1Q5TGY3 1603 aaPredicted RBP37.02■■■■□ 3.52
CGREF1-202ENST00000312734 RALBP1Q15311 655 aa37.02■■■■□ 3.52
CGREF1-202ENST00000312734 TNS3Q68CZ2 1445 aa37.01■■■■□ 3.52
CGREF1-202ENST00000312734 PARD3Q8TEW0 1356 aa37■■■■□ 3.51
CGREF1-202ENST00000312734 NLRP13Q86W25 1043 aa36.99■■■■□ 3.51
CGREF1-202ENST00000312734 USP31Q70CQ4 1352 aa36.99■■■■□ 3.51
CGREF1-202ENST00000312734 LRRC59Q96AG4 307 aaKnown RBP36.98■■■■□ 3.51
CGREF1-202ENST00000312734 PHLPP1O60346 1717 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 SOX12O15370 315 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 OVOS2A0A0J9YW53 1432 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 OVOS2Q6IE36 1432 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 ALS2Q96Q42 1657 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 FBLN1P23142 703 aa36.96■■■■□ 3.51
CGREF1-202ENST00000312734 ANKRD26Q9UPS8 1709 aa36.94■■■■□ 3.5
CGREF1-202ENST00000312734 ARHGEF10O15013 1369 aa36.93■■■■□ 3.5
CGREF1-202ENST00000312734 PPP2R1AP30153 589 aa36.9■■■■□ 3.5
CGREF1-202ENST00000312734 CABLES1Q8TDN4 633 aa36.9■■■■□ 3.5
CGREF1-202ENST00000312734 MYBBP1AQ9BQG0 1328 aaKnown RBP36.89■■■■□ 3.5
CGREF1-202ENST00000312734 COL16A1Q07092 1604 aaPredicted RBP36.88■■■■□ 3.49
CGREF1-202ENST00000312734 MARF1Q9Y4F3 1742 aaKnown RBP36.87■■■■□ 3.49
CGREF1-202ENST00000312734 HSPA1LP34931 641 aa36.85■■■■□ 3.49
CGREF1-202ENST00000312734 USP19O94966 1318 aa36.84■■■■□ 3.49
CGREF1-202ENST00000312734 GCP02774 474 aa36.84■■■■□ 3.49
CGREF1-202ENST00000312734 USP54Q70EL1 1684 aa36.83■■■■□ 3.49
CGREF1-202ENST00000312734 RRS1Q15050 365 aaKnown RBP36.83■■■■□ 3.49
CGREF1-202ENST00000312734 KCNH5Q8NCM2 988 aa36.82■■■■□ 3.49
CGREF1-202ENST00000312734 MED1Q15648 1581 aaPredicted RBP36.81■■■■□ 3.48
CGREF1-202ENST00000312734 MTHFSP49914 203 aa36.8■■■■□ 3.48
CGREF1-202ENST00000312734 POLKQ9UBT6 870 aa36.8■■■■□ 3.48
CGREF1-202ENST00000312734 PNPLA6Q8IY17 1366 aa36.79■■■■□ 3.48
CGREF1-202ENST00000312734 PPM1GO15355 546 aaPredicted RBP36.79■■■■□ 3.48
CGREF1-202ENST00000312734 AATKQ6ZMQ8 1374 aa36.79■■■■□ 3.48
CGREF1-202ENST00000312734 HAP1P54257 671 aaPredicted RBP36.78■■■■□ 3.48
CGREF1-202ENST00000312734 EMILIN1Q9Y6C2 1016 aa36.77■■■■□ 3.48
CGREF1-202ENST00000312734 SLIT3O75094 1523 aa36.77■■■■□ 3.48
CGREF1-202ENST00000312734 ZBTB7CA1YPR0 619 aa36.77■■■■□ 3.48
CGREF1-202ENST00000312734 CCDC184Q52MB2 194 aa36.77■■■■□ 3.48
CGREF1-202ENST00000312734 ZC3H6P61129 1189 aaKnown RBP36.75■■■■□ 3.47
CGREF1-202ENST00000312734 MAP2P11137 1827 aaKnown RBP36.73■■■■□ 3.47
CGREF1-202ENST00000312734 MAP3K19Q56UN5 1328 aa36.73■■■■□ 3.47
CGREF1-202ENST00000312734 NFAT5O94916 1531 aa36.72■■■■□ 3.47
CGREF1-202ENST00000312734 PHRF1Q9P1Y6 1649 aaKnown RBP36.71■■■■□ 3.47
CGREF1-202ENST00000312734 CCER2I3L3R5 266 aa36.7■■■■□ 3.47
CGREF1-202ENST00000312734 FBXO41Q8TF61 875 aa36.7■■■■□ 3.47
CGREF1-202ENST00000312734 MRS2Q9HD23 443 aa36.7■■■■□ 3.47
CGREF1-202ENST00000312734 CRYBG1Q9Y4K1 1723 aa36.69■■■■□ 3.46
CGREF1-202ENST00000312734 JCADQ9P266 1359 aa36.69■■■■□ 3.46
CGREF1-202ENST00000312734 AMPHP49418 695 aa36.69■■■■□ 3.46
CGREF1-202ENST00000312734 ARHGEF25Q86VW2 580 aa36.67■■■■□ 3.46
CGREF1-202ENST00000312734 COL22A1Q8NFW1 1626 aaPredicted RBP36.67■■■■□ 3.46
CGREF1-202ENST00000312734 NUTM2BA6NNL0 878 aaPredicted RBP36.67■■■■□ 3.46
CGREF1-202ENST00000312734 NUTM2EB1AL46 878 aaPredicted RBP36.67■■■■□ 3.46
CGREF1-202ENST00000312734 NUTM2AQ8IVF1 878 aaPredicted RBP36.67■■■■□ 3.46
CGREF1-202ENST00000312734 CFAP53Q96M91 514 aa36.63■■■■□ 3.45
CGREF1-202ENST00000312734 KIAA0232Q92628 1395 aa36.63■■■■□ 3.45
CGREF1-202ENST00000312734 ABCA3Q99758 1704 aa36.62■■■■□ 3.45
CGREF1-202ENST00000312734 SHPRHQ149N8 1683 aa36.61■■■■□ 3.45
CGREF1-202ENST00000312734 SMG6Q86US8 1419 aaKnown RBP36.61■■■■□ 3.45
CGREF1-202ENST00000312734 CHRNA2Q15822 529 aa36.61■■■■□ 3.45
CGREF1-202ENST00000312734 HSP90AB2PQ58FF8 381 aa36.61■■■■□ 3.45
CGREF1-202ENST00000312734 HOXC9P31274 260 aa36.6■■■■□ 3.45
CGREF1-202ENST00000312734 LTN1O94822 1766 aa36.6■■■■□ 3.45
CGREF1-202ENST00000312734 PEAK1Q9H792 1746 aa36.59■■■■□ 3.45
CGREF1-202ENST00000312734 PRDM11Q9NQV5 511 aa36.59■■■■□ 3.45
CGREF1-202ENST00000312734 FLT4P35916 1363 aa36.58■■■■□ 3.45
CGREF1-202ENST00000312734 ADAMTS2O95450 1211 aa36.58■■■■□ 3.45
CGREF1-202ENST00000312734 IP6K1Q92551 441 aa36.58■■■■□ 3.45
CGREF1-202ENST00000312734 CPDO75976 1380 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms