RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
MSL3-201ENST00000312196 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
MSL3-201ENST00000312196 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
MSL3-201ENST00000312196 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
MSL3-201ENST00000312196 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
MSL3-201ENST00000312196 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
MSL3-201ENST00000312196 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
MSL3-201ENST00000312196 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
MSL3-201ENST00000312196 BAG6P46379 1132 aa12.16□□□□□ -0.46
MSL3-201ENST00000312196 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
MSL3-201ENST00000312196 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
MSL3-201ENST00000312196 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
MSL3-201ENST00000312196 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
MSL3-201ENST00000312196 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
MSL3-201ENST00000312196 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
MSL3-201ENST00000312196 CPDO75976 1380 aa12.15□□□□□ -0.46
MSL3-201ENST00000312196 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.46
MSL3-201ENST00000312196 USP19O94966 1318 aa12.14□□□□□ -0.47
MSL3-201ENST00000312196 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
MSL3-201ENST00000312196 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
MSL3-201ENST00000312196 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
MSL3-201ENST00000312196 ABCC6O95255 1503 aa12.13□□□□□ -0.47
MSL3-201ENST00000312196 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
MSL3-201ENST00000312196 SSH2Q76I76 1423 aa12.12□□□□□ -0.47
MSL3-201ENST00000312196 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
MSL3-201ENST00000312196 NGDNQ8NEJ9 315 aaKnown RBP12.12□□□□□ -0.47
MSL3-201ENST00000312196 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
MSL3-201ENST00000312196 SLIT3O75094 1523 aa12.12□□□□□ -0.47
MSL3-201ENST00000312196 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSL3-201ENST00000312196 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 LMO7Q8WWI1 1683 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 PMFBP1Q8TBY8 1022 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
MSL3-201ENST00000312196 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
MSL3-201ENST00000312196 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
MSL3-201ENST00000312196 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
MSL3-201ENST00000312196 ACEP12821 1306 aa12.09□□□□□ -0.47
MSL3-201ENST00000312196 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
MSL3-201ENST00000312196 PPIP5K1Q6PFW1 1433 aa12.09□□□□□ -0.47
MSL3-201ENST00000312196 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
MSL3-201ENST00000312196 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
MSL3-201ENST00000312196 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
MSL3-201ENST00000312196 BCL9O00512 1426 aa12.08□□□□□ -0.48
MSL3-201ENST00000312196 USP6P35125 1406 aa12.08□□□□□ -0.48
MSL3-201ENST00000312196 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
MSL3-201ENST00000312196 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
MSL3-201ENST00000312196 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
MSL3-201ENST00000312196 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
MSL3-201ENST00000312196 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
MSL3-201ENST00000312196 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
MSL3-201ENST00000312196 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
MSL3-201ENST00000312196 RREB1Q92766 1687 aa12.06□□□□□ -0.48
MSL3-201ENST00000312196 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
MSL3-201ENST00000312196 TTC21AQ8NDW8 1320 aa12.06□□□□□ -0.48
MSL3-201ENST00000312196 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
MSL3-201ENST00000312196 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
MSL3-201ENST00000312196 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
MSL3-201ENST00000312196 CAMKK2Q96RR4 588 aa12.05□□□□□ -0.48
MSL3-201ENST00000312196 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
MSL3-201ENST00000312196 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
MSL3-201ENST00000312196 PARP4Q9UKK3 1724 aaKnown RBP12.05□□□□□ -0.48
MSL3-201ENST00000312196 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
MSL3-201ENST00000312196 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 COL18A1P39060 1754 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 SIN3AQ96ST3 1273 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
MSL3-201ENST00000312196 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
MSL3-201ENST00000312196 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
MSL3-201ENST00000312196 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
MSL3-201ENST00000312196 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.49
MSL3-201ENST00000312196 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
MSL3-201ENST00000312196 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
MSL3-201ENST00000312196 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
MSL3-201ENST00000312196 CABP2Q9NPB3 220 aa12□□□□□ -0.49
MSL3-201ENST00000312196 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
MSL3-201ENST00000312196 ABTB2Q8N961 1025 aa12□□□□□ -0.49
MSL3-201ENST00000312196 KCNH5Q8NCM2 988 aa12□□□□□ -0.49
MSL3-201ENST00000312196 PEAK1Q9H792 1746 aa12□□□□□ -0.49
MSL3-201ENST00000312196 CRB1P82279 1406 aa12□□□□□ -0.49
MSL3-201ENST00000312196 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
MSL3-201ENST00000312196 COL5A2P05997 1499 aaPredicted RBP11.99□□□□□ -0.49
MSL3-201ENST00000312196 NFAT5O94916 1531 aa11.99□□□□□ -0.49
MSL3-201ENST00000312196 TTC21BQ7Z4L5 1316 aa11.99□□□□□ -0.49
MSL3-201ENST00000312196 GCP02774 474 aa11.99□□□□□ -0.49
MSL3-201ENST00000312196 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
MSL3-201ENST00000312196 PLSCR1O15162 318 aa11.98□□□□□ -0.49
MSL3-201ENST00000312196 EVA1CP58658 441 aa11.98□□□□□ -0.49
MSL3-201ENST00000312196 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
MSL3-201ENST00000312196 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
MSL3-201ENST00000312196 PDE3BQ13370 1112 aa11.98□□□□□ -0.49
MSL3-201ENST00000312196 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
MSL3-201ENST00000312196 EDC4Q6P2E9 1401 aaKnown RBP11.97□□□□□ -0.49
MSL3-201ENST00000312196 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
MSL3-201ENST00000312196 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
MSL3-201ENST00000312196 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms