RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 RNF123Q5XPI4 1314 aa31.2■■■□□ 2.59
SNCB-201ENST00000310112 RUNDC1Q96C34 613 aa31.2■■■□□ 2.59
SNCB-201ENST00000310112 COG3Q96JB2 828 aa31.2■■■□□ 2.59
SNCB-201ENST00000310112 NCKAP5LQ9HCH0 1330 aa31.19■■■□□ 2.58
SNCB-201ENST00000310112 TTC21AQ8NDW8 1320 aa31.19■■■□□ 2.58
SNCB-201ENST00000310112 NKTRP30414 1462 aaKnown RBP31.18■■■□□ 2.58
SNCB-201ENST00000310112 TTC21BQ7Z4L5 1316 aa31.18■■■□□ 2.58
SNCB-201ENST00000310112 SALL2Q9Y467 1007 aaPredicted RBP31.17■■■□□ 2.58
SNCB-201ENST00000310112 SSH2Q76I76 1423 aa31.15■■■□□ 2.58
SNCB-201ENST00000310112 APAF1O14727 1248 aa31.15■■■□□ 2.58
SNCB-201ENST00000310112 NME9Q86XW9 330 aa31.15■■■□□ 2.58
SNCB-201ENST00000310112 PNNQ9H307 717 aaKnown RBP31.15■■■□□ 2.58
SNCB-201ENST00000310112 ADGRL3Q9HAR2 1447 aa31.15■■■□□ 2.58
SNCB-201ENST00000310112 GOLGA2Q08379 1002 aa31.14■■■□□ 2.58
SNCB-201ENST00000310112 CCDC146Q8IYE0 955 aa31.14■■■□□ 2.58
SNCB-201ENST00000310112 NALCNQ8IZF0 1738 aa31.14■■■□□ 2.58
SNCB-201ENST00000310112 DIAPH1O60610 1272 aaKnown RBP31.12■■■□□ 2.57
SNCB-201ENST00000310112 IQSEC2Q5JU85 1478 aa31.12■■■□□ 2.57
SNCB-201ENST00000310112 CDK12Q9NYV4 1490 aaPredicted RBP31.12■■■□□ 2.57
SNCB-201ENST00000310112 SENP3-EIF4A1A0A087X0R7 540 aa31.11■■■□□ 2.57
SNCB-201ENST00000310112 POLKQ9UBT6 870 aa31.11■■■□□ 2.57
SNCB-201ENST00000310112 MAP2P11137 1827 aaKnown RBP31.1■■■□□ 2.57
SNCB-201ENST00000310112 U2AF1L5P0DN76 240 aaPredicted RBP31.09■■■□□ 2.57
SNCB-201ENST00000310112 U2AF1Q01081 240 aaKnown RBP eCLIP31.09■■■□□ 2.57
SNCB-201ENST00000310112 OVOS2A0A0J9YW53 1432 aa31.09■■■□□ 2.57
SNCB-201ENST00000310112 OVOS2Q6IE36 1432 aa31.09■■■□□ 2.57
SNCB-201ENST00000310112 PELP1Q8IZL8 1130 aaKnown RBP31.08■■■□□ 2.57
SNCB-201ENST00000310112 NGDNQ8NEJ9 315 aaKnown RBP31.08■■■□□ 2.57
SNCB-201ENST00000310112 RGPD8O14715 1765 aaPredicted RBP31.08■■■□□ 2.57
SNCB-201ENST00000310112 CCDC27Q2M243 656 aa31.07■■■□□ 2.56
SNCB-201ENST00000310112 NUTM2FA1L443 756 aa31.06■■■□□ 2.56
SNCB-201ENST00000310112 CDCA7LQ96GN5 454 aa31.06■■■□□ 2.56
SNCB-201ENST00000310112 RCAN3Q9UKA8 241 aa31.06■■■□□ 2.56
SNCB-201ENST00000310112 USP31Q70CQ4 1352 aa31.06■■■□□ 2.56
SNCB-201ENST00000310112 E9PSI1 815 aa31.04■■■□□ 2.56
SNCB-201ENST00000310112 SLFN5Q08AF3 891 aa31.04■■■□□ 2.56
SNCB-201ENST00000310112 TRMT2AQ8IZ69 625 aaKnown RBP31.03■■■□□ 2.56
SNCB-201ENST00000310112 TCP11L2Q8N4U5 519 aa31.03■■■□□ 2.56
SNCB-201ENST00000310112 LRRC7Q96NW7 1537 aa31.02■■■□□ 2.56
SNCB-201ENST00000310112 PHF23Q9BUL5 403 aaPredicted RBP31.02■■■□□ 2.56
SNCB-201ENST00000310112 DUSP27Q5VZP5 1158 aa31.01■■■□□ 2.55
SNCB-201ENST00000310112 PMFBP1Q8TBY8 1022 aa31.01■■■□□ 2.55
SNCB-201ENST00000310112 NCOA3Q9Y6Q9 1424 aa31■■■□□ 2.55
SNCB-201ENST00000310112 U2SURPO15042 1029 aaKnown RBP31■■■□□ 2.55
SNCB-201ENST00000310112 FCHSD2O94868 740 aa31■■■□□ 2.55
SNCB-201ENST00000310112 USP54Q70EL1 1684 aa30.99■■■□□ 2.55
SNCB-201ENST00000310112 WDR63Q8IWG1 891 aa30.99■■■□□ 2.55
SNCB-201ENST00000310112 ZRANB1Q9UGI0 708 aa30.99■■■□□ 2.55
SNCB-201ENST00000310112 WWC1Q8IX03 1113 aa30.98■■■□□ 2.55
SNCB-201ENST00000310112 PLEKHF1Q96S99 279 aa30.97■■■□□ 2.55
SNCB-201ENST00000310112 PHF8Q9UPP1 1060 aa30.97■■■□□ 2.55
SNCB-201ENST00000310112 MAPK8IP3Q9UPT6 1336 aa30.96■■■□□ 2.55
SNCB-201ENST00000310112 PPP4R2Q9NY27 417 aa30.96■■■□□ 2.55
SNCB-201ENST00000310112 EMILIN1Q9Y6C2 1016 aa30.95■■■□□ 2.55
SNCB-201ENST00000310112 RRP1P56182 461 aaKnown RBP30.94■■■□□ 2.54
SNCB-201ENST00000310112 PROSER2Q86WR7 435 aaPredicted RBP30.94■■■□□ 2.54
SNCB-201ENST00000310112 PPM1GO15355 546 aaPredicted RBP30.93■■■□□ 2.54
SNCB-201ENST00000310112 NEFMP07197 916 aa30.92■■■□□ 2.54
SNCB-201ENST00000310112 IL13P35225 146 aa30.92■■■□□ 2.54
SNCB-201ENST00000310112 C14orf37Q86TY3 774 aa30.92■■■□□ 2.54
SNCB-201ENST00000310112 PIK3C2AO00443 1686 aa30.91■■■□□ 2.54
SNCB-201ENST00000310112 KDM4FA0A1W2PPD8 638 aa30.91■■■□□ 2.54
SNCB-201ENST00000310112 IRX6P78412 446 aaPredicted RBP30.91■■■□□ 2.54
SNCB-201ENST00000310112 KIF24Q5T7B8 1368 aa30.89■■■□□ 2.54
SNCB-201ENST00000310112 DCCP43146 1447 aa30.89■■■□□ 2.54
SNCB-201ENST00000310112 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
SNCB-201ENST00000310112 TMPOP42166 694 aaKnown RBP30.87■■■□□ 2.53
SNCB-201ENST00000310112 RRS1Q15050 365 aaKnown RBP30.87■■■□□ 2.53
SNCB-201ENST00000310112 RSPH6AQ9H0K4 717 aa30.87■■■□□ 2.53
SNCB-201ENST00000310112 FBLN1P23142 703 aa30.86■■■□□ 2.53
SNCB-201ENST00000310112 KIF1AQ12756 1690 aa30.85■■■□□ 2.53
SNCB-201ENST00000310112 LMTK3Q96Q04 1460 aa30.84■■■□□ 2.53
SNCB-201ENST00000310112 IL16Q14005 1332 aa30.84■■■□□ 2.53
SNCB-201ENST00000310112 SBNO1A3KN83 1393 aa30.83■■■□□ 2.53
SNCB-201ENST00000310112 MYH16Q9H6N6 1097 aa30.82■■■□□ 2.52
SNCB-201ENST00000310112 RRP7AQ9Y3A4 280 aaKnown RBP30.82■■■□□ 2.52
SNCB-201ENST00000310112 NLRP6P59044 892 aa30.81■■■□□ 2.52
SNCB-201ENST00000310112 NEUROD2Q15784 382 aa30.81■■■□□ 2.52
SNCB-201ENST00000310112 ESCO1Q5FWF5 840 aa30.81■■■□□ 2.52
SNCB-201ENST00000310112 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.81■■■□□ 2.52
SNCB-201ENST00000310112 FLT4P35916 1363 aa30.81■■■□□ 2.52
SNCB-201ENST00000310112 SPINK5Q9NQ38 1064 aaPredicted RBP30.8■■■□□ 2.52
SNCB-201ENST00000310112 PRKAR2BP31323 418 aa30.79■■■□□ 2.52
SNCB-201ENST00000310112 PSME1Q06323 249 aa30.79■■■□□ 2.52
SNCB-201ENST00000310112 RBM33Q96EV2 1170 aaKnown RBP30.79■■■□□ 2.52
SNCB-201ENST00000310112 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
SNCB-201ENST00000310112 MARF1Q9Y4F3 1742 aaKnown RBP30.78■■■□□ 2.52
SNCB-201ENST00000310112 ABTB2Q8N961 1025 aa30.78■■■□□ 2.52
SNCB-201ENST00000310112 C1orf167Q5SNV9 1468 aa30.77■■■□□ 2.52
SNCB-201ENST00000310112 STRCP1A6NGW2 1772 aa30.76■■■□□ 2.51
SNCB-201ENST00000310112 HSPA2P54652 639 aa30.76■■■□□ 2.51
SNCB-201ENST00000310112 EIF4A2Q14240 407 aaKnown RBP30.76■■■□□ 2.51
SNCB-201ENST00000310112 DMRT2Q9Y5R5 561 aa30.76■■■□□ 2.51
SNCB-201ENST00000310112 MAP3K19Q56UN5 1328 aa30.76■■■□□ 2.51
SNCB-201ENST00000310112 TMEM94Q12767 1356 aa30.76■■■□□ 2.51
SNCB-201ENST00000310112 RIPK4P57078 832 aa30.75■■■□□ 2.51
SNCB-201ENST00000310112 NFE2L2Q16236 605 aa30.75■■■□□ 2.51
SNCB-201ENST00000310112 RTL1A6NKG5 1358 aa30.74■■■□□ 2.51
SNCB-201ENST00000310112 CT47B1P0C2W7 299 aaPredicted RBP30.74■■■□□ 2.51
SNCB-201ENST00000310112 ATF3P18847 181 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms